RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 NPC2P61916 151 aa13.75□□□□□ -0.21
SUMO3-201ENST00000332859 H7C2G1 150 aa13.74□□□□□ -0.21
SUMO3-201ENST00000332859 SS18Q15532 418 aa13.74□□□□□ -0.21
SUMO3-201ENST00000332859 DNHD1Q96M86 4753 aa13.74□□□□□ -0.21
SUMO3-201ENST00000332859 DAND5Q8N907 189 aa13.74□□□□□ -0.21
SUMO3-201ENST00000332859 VPS25Q9BRG1 176 aa13.74□□□□□ -0.21
SUMO3-201ENST00000332859 ANGP03950 147 aaKnown RBP13.73□□□□□ -0.21
SUMO3-201ENST00000332859 ESRGQ1W209 222 aa13.72□□□□□ -0.21
SUMO3-201ENST00000332859 LINC01561Q8N1V8 128 aa13.72□□□□□ -0.21
SUMO3-201ENST00000332859 LINC00269Q8N2A0 174 aa13.71□□□□□ -0.21
SUMO3-201ENST00000332859 Q8N3U1 123 aa13.71□□□□□ -0.21
SUMO3-201ENST00000332859 J3QR89 54 aa13.71□□□□□ -0.22
SUMO3-201ENST00000332859 ETDBQ3ZM63 59 aa13.71□□□□□ -0.22
SUMO3-201ENST00000332859 MTURNQ8N3F0 131 aa13.71□□□□□ -0.22
SUMO3-201ENST00000332859 CLPSL2Q6UWE3 100 aa13.7□□□□□ -0.22
SUMO3-201ENST00000332859 SMCPP49901 116 aaPredicted RBP13.69□□□□□ -0.22
SUMO3-201ENST00000332859 REG3AQ06141 175 aa13.69□□□□□ -0.22
SUMO3-201ENST00000332859 TRIAP1O43715 76 aa13.69□□□□□ -0.22
SUMO3-201ENST00000332859 ATXN8Q156A1 80 aa13.69□□□□□ -0.22
SUMO3-201ENST00000332859 WFDC10BQ8IUB3 73 aa13.69□□□□□ -0.22
SUMO3-201ENST00000332859 TOMM7Q9P0U1 55 aa13.69□□□□□ -0.22
SUMO3-201ENST00000332859 COX6CP09669 75 aa13.68□□□□□ -0.22
SUMO3-201ENST00000332859 RPL13AP40429 203 aaKnown RBP13.68□□□□□ -0.22
SUMO3-201ENST00000332859 C5orf38Q86SI9 138 aa13.68□□□□□ -0.22
SUMO3-201ENST00000332859 DNAH9Q9NYC9 4486 aa13.68□□□□□ -0.22
SUMO3-201ENST00000332859 A0A0U1RRA0 63 aa13.67□□□□□ -0.22
SUMO3-201ENST00000332859 M0QXV9 152 aa13.67□□□□□ -0.22
SUMO3-201ENST00000332859 SOSTDC1Q6X4U4 206 aa13.67□□□□□ -0.22
SUMO3-201ENST00000332859 IBA57-AS1B1ANH7 110 aa13.65□□□□□ -0.22
SUMO3-201ENST00000332859 XCL1P47992 114 aa13.65□□□□□ -0.22
SUMO3-201ENST00000332859 KLK12Q9UKR0 248 aa13.65□□□□□ -0.22
SUMO3-201ENST00000332859 PRR34Q9NV39 138 aa13.64□□□□□ -0.23
SUMO3-201ENST00000332859 Q8IZM0 81 aa13.63□□□□□ -0.23
SUMO3-201ENST00000332859 CD164L2Q6UWJ8 174 aa13.62□□□□□ -0.23
SUMO3-201ENST00000332859 TEN1Q86WV5 123 aa13.62□□□□□ -0.23
SUMO3-201ENST00000332859 CHCHD10Q8WYQ3 142 aaPredicted RBP13.62□□□□□ -0.23
SUMO3-201ENST00000332859 CRPP02741 224 aa13.62□□□□□ -0.23
SUMO3-201ENST00000332859 CCL18P55774 89 aa13.62□□□□□ -0.23
SUMO3-201ENST00000332859 LINC01620Q4KN68 170 aa13.62□□□□□ -0.23
SUMO3-201ENST00000332859 C6orf226Q5I0X4 101 aa13.62□□□□□ -0.23
SUMO3-201ENST00000332859 LINC01556Q5JQF7 62 aa13.62□□□□□ -0.23
SUMO3-201ENST00000332859 LINC01600Q96MT4 127 aa13.62□□□□□ -0.23
SUMO3-201ENST00000332859 C9JAW5 83 aa13.61□□□□□ -0.23
SUMO3-201ENST00000332859 SLC25A20O43772 301 aa13.61□□□□□ -0.23
SUMO3-201ENST00000332859 MIR7-3HGQ8N6C7 128 aa13.61□□□□□ -0.23
SUMO3-201ENST00000332859 FOXI1Q12951 378 aa13.6□□□□□ -0.23
SUMO3-201ENST00000332859 LINC00588Q9Y4M8 146 aa13.6□□□□□ -0.23
SUMO3-201ENST00000332859 IGLV10-54A0A075B6I4 117 aa13.6□□□□□ -0.23
SUMO3-201ENST00000332859 LINC00158P58513 81 aa13.6□□□□□ -0.23
SUMO3-201ENST00000332859 ENHOQ6UWT2 76 aa13.6□□□□□ -0.23
SUMO3-201ENST00000332859 COL7A1Q02388 2944 aa13.59□□□□□ -0.23
SUMO3-201ENST00000332859 PPDPFLQ8WWR9 84 aa13.59□□□□□ -0.23
SUMO3-201ENST00000332859 UBE2WQ96B02 151 aa13.58□□□□□ -0.24
SUMO3-201ENST00000332859 TRAV8-4A0A0B4J246 113 aa13.57□□□□□ -0.24
SUMO3-201ENST00000332859 COX7A2LO14548 114 aa13.57□□□□□ -0.24
SUMO3-201ENST00000332859 DNAH10OSP0CZ25 163 aa13.57□□□□□ -0.24
SUMO3-201ENST00000332859 TRAV13-2A0A0B4J235 113 aa13.57□□□□□ -0.24
SUMO3-201ENST00000332859 TRBV10-2A0A0K0K1G8 114 aa13.57□□□□□ -0.24
SUMO3-201ENST00000332859 LST1O00453 97 aa13.57□□□□□ -0.24
SUMO3-201ENST00000332859 CXCL5P42830 114 aa13.56□□□□□ -0.24
SUMO3-201ENST00000332859 GAGE12HA6NDE8 117 aa13.55□□□□□ -0.24
SUMO3-201ENST00000332859 ANKRD29Q8N6D5 301 aa13.55□□□□□ -0.24
SUMO3-201ENST00000332859 SND1-IT1Q9HBX3 110 aa13.55□□□□□ -0.24
SUMO3-201ENST00000332859 NUPR2A6NF83 97 aa13.54□□□□□ -0.24
SUMO3-201ENST00000332859 MEGF8Q7Z7M0 2845 aa13.54□□□□□ -0.24
SUMO3-201ENST00000332859 UPK3BQ9BT76 320 aa13.54□□□□□ -0.24
SUMO3-201ENST00000332859 MALP21145 153 aa13.53□□□□□ -0.24
SUMO3-201ENST00000332859 STAB2Q8WWQ8 2551 aa13.53□□□□□ -0.24
SUMO3-201ENST00000332859 CKS1BP61024 79 aa13.53□□□□□ -0.24
SUMO3-201ENST00000332859 CFAP161Q6P656 301 aa13.53□□□□□ -0.24
SUMO3-201ENST00000332859 CLEC2BQ92478 149 aa13.53□□□□□ -0.24
SUMO3-201ENST00000332859 APLNQ9ULZ1 77 aa13.53□□□□□ -0.24
SUMO3-201ENST00000332859 H3BT86 120 aa13.52□□□□□ -0.25
SUMO3-201ENST00000332859 PFN2P35080 140 aa13.52□□□□□ -0.25
SUMO3-201ENST00000332859 KIAA0087Q14695 138 aa13.52□□□□□ -0.25
SUMO3-201ENST00000332859 CARD19Q96LW7 228 aa13.52□□□□□ -0.25
SUMO3-201ENST00000332859 KLK5Q9Y337 293 aaPredicted RBP13.52□□□□□ -0.25
SUMO3-201ENST00000332859 COX17Q14061 63 aa13.5□□□□□ -0.25
SUMO3-201ENST00000332859 IGKV2-28A0A075B6P5 120 aa13.5□□□□□ -0.25
SUMO3-201ENST00000332859 IGKV2D-28P01615 120 aa13.5□□□□□ -0.25
SUMO3-201ENST00000332859 RPL28P46779 137 aaKnown RBP13.48□□□□□ -0.25
SUMO3-201ENST00000332859 PCP4P48539 62 aa13.48□□□□□ -0.25
SUMO3-201ENST00000332859 C2orf82Q6UX34 121 aa13.48□□□□□ -0.25
SUMO3-201ENST00000332859 LINC00337Q8N6G1 96 aa13.48□□□□□ -0.25
SUMO3-201ENST00000332859 PRKDCP78527 4128 aaKnown RBP13.47□□□□□ -0.25
SUMO3-201ENST00000332859 C1orf43Q9BWL3 253 aa13.47□□□□□ -0.25
SUMO3-201ENST00000332859 UBE2DNLQ8IWF7 75 aa13.46□□□□□ -0.26
SUMO3-201ENST00000332859 KRTAP26-1Q6PEX3 210 aa13.45□□□□□ -0.26
SUMO3-201ENST00000332859 TRACP01848 142 aa13.44□□□□□ -0.26
SUMO3-201ENST00000332859 NTN5Q8WTR8 489 aaPredicted RBP13.44□□□□□ -0.26
SUMO3-201ENST00000332859 IGKV2D-24A0A075B6R9 120 aa13.43□□□□□ -0.26
SUMO3-201ENST00000332859 MUC7Q8TAX7 377 aa13.43□□□□□ -0.26
SUMO3-201ENST00000332859 SIGMAR1Q99720 223 aa13.43□□□□□ -0.26
SUMO3-201ENST00000332859 SPAG11BQ08648 103 aa13.42□□□□□ -0.26
SUMO3-201ENST00000332859 Q9HAA7 133 aa13.42□□□□□ -0.26
SUMO3-201ENST00000332859 DYNC2H1Q8NCM8 4307 aaKnown RBP13.41□□□□□ -0.26
SUMO3-201ENST00000332859 NDUFC2O95298 119 aa13.41□□□□□ -0.26
SUMO3-201ENST00000332859 SMIM11BQ8TCY0 68 aa13.4□□□□□ -0.26
SUMO3-201ENST00000332859 RMI2Q96E14 147 aa13.39□□□□□ -0.27
SUMO3-201ENST00000332859 H0YGX0 51 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 170.5 ms