RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 LINC00269Q8N2A0 174 aa6.54□□□□□ -1.36
SYN3-201ENST00000332840 HSPG2P98160 4391 aa6.53□□□□□ -1.36
SYN3-201ENST00000332840 IGLV5-39A0A0G2JS06 123 aa6.53□□□□□ -1.36
SYN3-201ENST00000332840 IBA57-AS1B1ANH7 110 aa6.53□□□□□ -1.36
SYN3-201ENST00000332840 GHRHP01286 108 aa6.53□□□□□ -1.36
SYN3-201ENST00000332840 HINT1P49773 126 aaPredicted RBP6.53□□□□□ -1.36
SYN3-201ENST00000332840 REG3AQ06141 175 aa6.53□□□□□ -1.36
SYN3-201ENST00000332840 TAL2Q16559 108 aa6.53□□□□□ -1.36
SYN3-201ENST00000332840 SCGB1D4Q6XE38 83 aa6.53□□□□□ -1.36
SYN3-201ENST00000332840 IGHV3OR16-9A0A0B4J2B5 98 aa6.52□□□□□ -1.37
SYN3-201ENST00000332840 SMIM1B2RUZ4 78 aa6.52□□□□□ -1.37
SYN3-201ENST00000332840 PSCAO43653 123 aa6.52□□□□□ -1.37
SYN3-201ENST00000332840 BATFQ16520 125 aa6.52□□□□□ -1.37
SYN3-201ENST00000332840 CLPSL2Q6UWE3 100 aa6.52□□□□□ -1.37
SYN3-201ENST00000332840 LINC01561Q8N1V8 128 aa6.52□□□□□ -1.37
SYN3-201ENST00000332840 KLK12Q9UKR0 248 aa6.52□□□□□ -1.37
SYN3-201ENST00000332840 A0A087WZ39 114 aa6.51□□□□□ -1.37
SYN3-201ENST00000332840 IGHV3-30P01768 117 aa6.51□□□□□ -1.37
SYN3-201ENST00000332840 IGHV3-33P01772 117 aa6.51□□□□□ -1.37
SYN3-201ENST00000332840 IGHV3-30-5P0DP03 117 aa6.51□□□□□ -1.37
SYN3-201ENST00000332840 BVES-AS1Q5T3Y7 98 aa6.51□□□□□ -1.37
SYN3-201ENST00000332840 CD164L2Q6UWJ8 174 aa6.51□□□□□ -1.37
SYN3-201ENST00000332840 TM2D2Q9BX73 214 aa6.51□□□□□ -1.37
SYN3-201ENST00000332840 PRR34Q9NV39 138 aa6.51□□□□□ -1.37
SYN3-201ENST00000332840 NDUFA12Q9UI09 145 aa6.51□□□□□ -1.37
SYN3-201ENST00000332840 COX11Q9Y6N1 276 aa6.51□□□□□ -1.37
SYN3-201ENST00000332840 TRAV8-4A0A0B4J246 113 aa6.5□□□□□ -1.37
SYN3-201ENST00000332840 CDK2AP2O75956 126 aa6.5□□□□□ -1.37
SYN3-201ENST00000332840 CRPP02741 224 aa6.5□□□□□ -1.37
SYN3-201ENST00000332840 XCL1P47992 114 aa6.5□□□□□ -1.37
SYN3-201ENST00000332840 C5orf38Q86SI9 138 aa6.5□□□□□ -1.37
SYN3-201ENST00000332840 ORAOV1Q8WV07 137 aa6.5□□□□□ -1.37
SYN3-201ENST00000332840 CHCHD10Q8WYQ3 142 aaPredicted RBP6.5□□□□□ -1.37
SYN3-201ENST00000332840 RMI2Q96E14 147 aa6.5□□□□□ -1.37
SYN3-201ENST00000332840 HIST1H4GQ99525 98 aa6.5□□□□□ -1.37
SYN3-201ENST00000332840 A0A087WTM6 91 aa6.49□□□□□ -1.37
SYN3-201ENST00000332840 NDUFA1O15239 70 aa6.49□□□□□ -1.37
SYN3-201ENST00000332840 COL5A1-AS1Q5SY13 56 aa6.49□□□□□ -1.37
SYN3-201ENST00000332840 ENHOQ6UWT2 76 aa6.49□□□□□ -1.37
SYN3-201ENST00000332840 COX7B2Q8TF08 81 aa6.49□□□□□ -1.37
SYN3-201ENST00000332840 UBE2WQ96B02 151 aa6.49□□□□□ -1.37
SYN3-201ENST00000332840 SPANXB1Q9NS25 103 aaPredicted RBP6.49□□□□□ -1.37
SYN3-201ENST00000332840 A0A0J9YXY3 114 aa6.48□□□□□ -1.37
SYN3-201ENST00000332840 TMEM238C9JI98 176 aa6.48□□□□□ -1.37
SYN3-201ENST00000332840 COX7A2LO14548 114 aa6.48□□□□□ -1.37
SYN3-201ENST00000332840 GCSHP23434 173 aa6.48□□□□□ -1.37
SYN3-201ENST00000332840 HERV-K104P63124 156 aa6.48□□□□□ -1.37
SYN3-201ENST00000332840 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
SYN3-201ENST00000332840 MIAQ16674 131 aa6.48□□□□□ -1.37
SYN3-201ENST00000332840 CEND1Q8N111 149 aa6.48□□□□□ -1.37
SYN3-201ENST00000332840 Q9HAA7 133 aa6.48□□□□□ -1.37
SYN3-201ENST00000332840 IGLV10-54A0A075B6I4 117 aa6.47□□□□□ -1.37
SYN3-201ENST00000332840 GAGE12HA6NDE8 117 aa6.47□□□□□ -1.37
SYN3-201ENST00000332840 A6NDN8 102 aa6.47□□□□□ -1.37
SYN3-201ENST00000332840 TIMM17BO60830 172 aa6.47□□□□□ -1.37
SYN3-201ENST00000332840 MALP21145 153 aa6.47□□□□□ -1.37
SYN3-201ENST00000332840 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
SYN3-201ENST00000332840 NTN5Q8WTR8 489 aaPredicted RBP6.47□□□□□ -1.37
SYN3-201ENST00000332840 TOMM7Q9P0U1 55 aa6.47□□□□□ -1.37
SYN3-201ENST00000332840 DMBT1Q9UGM3 2413 aaPredicted RBP6.46□□□□□ -1.38
SYN3-201ENST00000332840 APOMO95445 188 aa6.46□□□□□ -1.38
SYN3-201ENST00000332840 PRSS2P07478 247 aa6.46□□□□□ -1.38
SYN3-201ENST00000332840 PTTG1IPP53801 180 aa6.46□□□□□ -1.38
SYN3-201ENST00000332840 FOXI1Q12951 378 aa6.46□□□□□ -1.38
SYN3-201ENST00000332840 CIRBPQ14011 172 aaKnown RBP6.46□□□□□ -1.38
SYN3-201ENST00000332840 SFTA2Q6UW10 78 aa6.46□□□□□ -1.38
SYN3-201ENST00000332840 Q6ZVH6 145 aa6.46□□□□□ -1.38
SYN3-201ENST00000332840 Q8IZM0 81 aa6.46□□□□□ -1.38
SYN3-201ENST00000332840 ZNF625Q96I27 306 aaPredicted RBP6.46□□□□□ -1.38
SYN3-201ENST00000332840 HERC1Q15751 4861 aa6.46□□□□□ -1.38
SYN3-201ENST00000332840 TMEM238LA0A1B0GVL6 79 aa6.45□□□□□ -1.38
SYN3-201ENST00000332840 FXYD2P54710 66 aa6.45□□□□□ -1.38
SYN3-201ENST00000332840 C6orf226Q5I0X4 101 aa6.45□□□□□ -1.38
SYN3-201ENST00000332840 CXCL5P42830 114 aa6.44□□□□□ -1.38
SYN3-201ENST00000332840 MEIG1Q5JSS6 88 aa6.44□□□□□ -1.38
SYN3-201ENST00000332840 CFAP161Q6P656 301 aa6.44□□□□□ -1.38
SYN3-201ENST00000332840 C1orf43Q9BWL3 253 aa6.44□□□□□ -1.38
SYN3-201ENST00000332840 SPANXDQ9BXN6 97 aa6.44□□□□□ -1.38
SYN3-201ENST00000332840 SPANXCQ9NY87 97 aa6.44□□□□□ -1.38
SYN3-201ENST00000332840 IGLV5-52A0A0A0MRZ9 124 aa6.43□□□□□ -1.38
SYN3-201ENST00000332840 LRCOL1A6NCL2 159 aa6.43□□□□□ -1.38
SYN3-201ENST00000332840 SMIM13P0DJ93 91 aa6.43□□□□□ -1.38
SYN3-201ENST00000332840 IFITM1P13164 125 aa6.43□□□□□ -1.38
SYN3-201ENST00000332840 Q8N814 137 aa6.43□□□□□ -1.38
SYN3-201ENST00000332840 LITAFQ99732 161 aa6.43□□□□□ -1.38
SYN3-201ENST00000332840 APOBP04114 4563 aaKnown RBP6.43□□□□□ -1.38
SYN3-201ENST00000332840 IGKV2D-24A0A075B6R9 120 aa6.42□□□□□ -1.38
SYN3-201ENST00000332840 RPL24P83731 157 aaKnown RBP6.42□□□□□ -1.38
SYN3-201ENST00000332840 KRTAP26-1Q6PEX3 210 aa6.42□□□□□ -1.38
SYN3-201ENST00000332840 MUSTN1Q8IVN3 82 aa6.42□□□□□ -1.38
SYN3-201ENST00000332840 COPS9Q8WXC6 57 aa6.42□□□□□ -1.38
SYN3-201ENST00000332840 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
SYN3-201ENST00000332840 SRRM2Q9UQ35 2752 aaKnown RBP6.42□□□□□ -1.38
SYN3-201ENST00000332840 LRP1BQ9NZR2 4599 aa6.41□□□□□ -1.38
SYN3-201ENST00000332840 TAX1BP3O14907 124 aa6.41□□□□□ -1.38
SYN3-201ENST00000332840 CKS1BP61024 79 aa6.41□□□□□ -1.38
SYN3-201ENST00000332840 KIAA0087Q14695 138 aa6.41□□□□□ -1.38
SYN3-201ENST00000332840 C14orf177Q52M58 125 aa6.41□□□□□ -1.38
SYN3-201ENST00000332840 ADAMTSL4-AS1Q5T5F5 129 aa6.41□□□□□ -1.38
SYN3-201ENST00000332840 NHP2Q9NX24 153 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms