RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 CRYBA4P53673 196 aa11.36□□□□□ -0.59
SYNM-201ENST00000328642 SMIM9A6NGZ8 99 aa11.35□□□□□ -0.59
SYNM-201ENST00000328642 FOXI1Q12951 378 aa11.35□□□□□ -0.59
SYNM-201ENST00000328642 SPATA3Q8NHX4 192 aa11.35□□□□□ -0.59
SYNM-201ENST00000328642 Q6ZTC4 211 aa11.35□□□□□ -0.59
SYNM-201ENST00000328642 NKAPP1Q8N9T2 125 aa11.35□□□□□ -0.59
SYNM-201ENST00000328642 TIRAPP58753 221 aa11.35□□□□□ -0.59
SYNM-201ENST00000328642 MIFP14174 115 aa11.35□□□□□ -0.59
SYNM-201ENST00000328642 SMIM1B2RUZ4 78 aa11.34□□□□□ -0.59
SYNM-201ENST00000328642 CCL18P55774 89 aa11.34□□□□□ -0.59
SYNM-201ENST00000328642 G3V4G9 280 aa11.33□□□□□ -0.6
SYNM-201ENST00000328642 NDUFA1O15239 70 aa11.33□□□□□ -0.6
SYNM-201ENST00000328642 AMELXQ99217 191 aa11.32□□□□□ -0.6
SYNM-201ENST00000328642 KRTAP10-3P60369 221 aa11.31□□□□□ -0.6
SYNM-201ENST00000328642 IGKV2-24A0A0C4DH68 120 aa11.31□□□□□ -0.6
SYNM-201ENST00000328642 SS18L2Q9UHA2 77 aa11.31□□□□□ -0.6
SYNM-201ENST00000328642 SHISA2Q6UWI4 295 aa11.3□□□□□ -0.6
SYNM-201ENST00000328642 SPANXB1Q9NS25 103 aaPredicted RBP11.3□□□□□ -0.6
SYNM-201ENST00000328642 KRTAP1-1Q07627 177 aa11.3□□□□□ -0.6
SYNM-201ENST00000328642 B5MCH6 92 aa11.29□□□□□ -0.6
SYNM-201ENST00000328642 UNQ6190/PRO20217Q6UXQ8 127 aa11.29□□□□□ -0.6
SYNM-201ENST00000328642 A0A0B4J2C4 111 aa11.28□□□□□ -0.6
SYNM-201ENST00000328642 HAMPP81172 84 aa11.28□□□□□ -0.6
SYNM-201ENST00000328642 C6orf223Q8N319 242 aa11.28□□□□□ -0.6
SYNM-201ENST00000328642 SPANXCQ9NY87 97 aa11.28□□□□□ -0.6
SYNM-201ENST00000328642 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.27□□□□□ -0.61
SYNM-201ENST00000328642 TRBV10-2A0A0K0K1G8 114 aa11.26□□□□□ -0.61
SYNM-201ENST00000328642 KRTAP24-1Q3LI83 254 aa11.26□□□□□ -0.61
SYNM-201ENST00000328642 KIR2DL5BQ8NHK3 375 aa11.26□□□□□ -0.61
SYNM-201ENST00000328642 KMT2BQ9UMN6 2715 aaPredicted RBP11.26□□□□□ -0.61
SYNM-201ENST00000328642 C14orf132Q9NPU4 83 aa11.26□□□□□ -0.61
SYNM-201ENST00000328642 IGKV3D-7A0A0C4DH55 119 aa11.26□□□□□ -0.61
SYNM-201ENST00000328642 WFDC10BQ8IUB3 73 aa11.25□□□□□ -0.61
SYNM-201ENST00000328642 UFSP1Q6NVU6 142 aa11.24□□□□□ -0.61
SYNM-201ENST00000328642 X6R8D5 127 aa11.24□□□□□ -0.61
SYNM-201ENST00000328642 MT-ATP8P03928 68 aa11.23□□□□□ -0.61
SYNM-201ENST00000328642 GIG44P09565 113 aaPredicted RBP11.23□□□□□ -0.61
SYNM-201ENST00000328642 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
SYNM-201ENST00000328642 C6orf99Q4VX62 202 aa11.23□□□□□ -0.61
SYNM-201ENST00000328642 CD164L2Q6UWJ8 174 aa11.23□□□□□ -0.61
SYNM-201ENST00000328642 TENM4Q6N022 2769 aa11.23□□□□□ -0.61
SYNM-201ENST00000328642 ORMDL1Q9P0S3 153 aa11.22□□□□□ -0.61
SYNM-201ENST00000328642 CYSRT1A8MQ03 144 aa11.22□□□□□ -0.61
SYNM-201ENST00000328642 INAFM2P0DMQ5 153 aa11.22□□□□□ -0.61
SYNM-201ENST00000328642 A8MTW9 85 aa11.21□□□□□ -0.61
SYNM-201ENST00000328642 M0R2N4 97 aa11.21□□□□□ -0.61
SYNM-201ENST00000328642 OVOL2Q9BRP0 275 aa11.21□□□□□ -0.61
SYNM-201ENST00000328642 EIF4EBP3O60516 100 aaPredicted RBP11.21□□□□□ -0.61
SYNM-201ENST00000328642 IBA57-AS1B1ANH7 110 aa11.2□□□□□ -0.62
SYNM-201ENST00000328642 LELP1Q5T871 98 aa11.2□□□□□ -0.62
SYNM-201ENST00000328642 IGKV2-28A0A075B6P5 120 aa11.2□□□□□ -0.62
SYNM-201ENST00000328642 IGKV2D-28P01615 120 aa11.2□□□□□ -0.62
SYNM-201ENST00000328642 SMIM11BQ8TCY0 68 aa11.2□□□□□ -0.62
SYNM-201ENST00000328642 TMEM126AQ9H061 195 aa11.2□□□□□ -0.62
SYNM-201ENST00000328642 RNF183Q96D59 192 aa11.19□□□□□ -0.62
SYNM-201ENST00000328642 UBE2BP63146 152 aa11.19□□□□□ -0.62
SYNM-201ENST00000328642 H7C423 109 aa11.18□□□□□ -0.62
SYNM-201ENST00000328642 SPANXDQ9BXN6 97 aa11.18□□□□□ -0.62
SYNM-201ENST00000328642 BSNQ9UPA5 3926 aa11.18□□□□□ -0.62
SYNM-201ENST00000328642 TRBV30A0A0K0K1B3 111 aa11.17□□□□□ -0.62
SYNM-201ENST00000328642 H0YGX0 51 aa11.17□□□□□ -0.62
SYNM-201ENST00000328642 A0A087WZ39 114 aa11.17□□□□□ -0.62
SYNM-201ENST00000328642 NBPF19A0A087WUL8 3843 aa11.17□□□□□ -0.62
SYNM-201ENST00000328642 SMIM20Q8N5G0 67 aa11.17□□□□□ -0.62
SYNM-201ENST00000328642 C19orf73Q9NVV2 129 aa11.17□□□□□ -0.62
SYNM-201ENST00000328642 SPATA25Q9BR10 227 aa11.16□□□□□ -0.62
SYNM-201ENST00000328642 ZFHX3Q15911 3703 aa11.16□□□□□ -0.62
SYNM-201ENST00000328642 A0A096LNI7 61 aa11.15□□□□□ -0.63
SYNM-201ENST00000328642 DSCR8Q96T75 97 aa11.15□□□□□ -0.63
SYNM-201ENST00000328642 CXCL5P42830 114 aa11.14□□□□□ -0.63
SYNM-201ENST00000328642 IGHV3OR16-9A0A0B4J2B5 98 aa11.14□□□□□ -0.63
SYNM-201ENST00000328642 H3BT86 120 aa11.14□□□□□ -0.63
SYNM-201ENST00000328642 SOSTDC1Q6X4U4 206 aa11.14□□□□□ -0.63
SYNM-201ENST00000328642 ETDCA0A1B0GVM5 59 aa11.13□□□□□ -0.63
SYNM-201ENST00000328642 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
SYNM-201ENST00000328642 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
SYNM-201ENST00000328642 RPL37AP8A6NKH3 93 aa11.13□□□□□ -0.63
SYNM-201ENST00000328642 LYPD5Q6UWN5 251 aa11.13□□□□□ -0.63
SYNM-201ENST00000328642 RMI2Q96E14 147 aa11.13□□□□□ -0.63
SYNM-201ENST00000328642 FAM19A5Q7Z5A7 132 aaPredicted RBP11.12□□□□□ -0.63
SYNM-201ENST00000328642 LST1O00453 97 aa11.12□□□□□ -0.63
SYNM-201ENST00000328642 LINC00337Q8N6G1 96 aa11.11□□□□□ -0.63
SYNM-201ENST00000328642 CITED1Q99966 193 aa11.11□□□□□ -0.63
SYNM-201ENST00000328642 FBN1P35555 2871 aaKnown RBP11.11□□□□□ -0.63
SYNM-201ENST00000328642 DIRC1Q969H9 104 aa11.11□□□□□ -0.63
SYNM-201ENST00000328642 SYCNQ0VAF6 134 aa11.1□□□□□ -0.63
SYNM-201ENST00000328642 UBL5Q9BZL1 73 aa11.1□□□□□ -0.63
SYNM-201ENST00000328642 TIMM17BO60830 172 aa11.1□□□□□ -0.63
SYNM-201ENST00000328642 SBSPONQ8IVN8 264 aa11.1□□□□□ -0.63
SYNM-201ENST00000328642 OTOGQ6ZRI0 2925 aa11.1□□□□□ -0.63
SYNM-201ENST00000328642 PLAC8L1A1L4L8 177 aa11.1□□□□□ -0.63
SYNM-201ENST00000328642 TENM1Q9UKZ4 2725 aa11.09□□□□□ -0.63
SYNM-201ENST00000328642 TRAV10A0A0B4J240 114 aa11.09□□□□□ -0.63
SYNM-201ENST00000328642 XGP55808 180 aa11.09□□□□□ -0.63
SYNM-201ENST00000328642 C10orf25Q5T742 122 aa11.09□□□□□ -0.63
SYNM-201ENST00000328642 Q6ZQY7 126 aa11.09□□□□□ -0.63
SYNM-201ENST00000328642 Q8IZM0 81 aa11.09□□□□□ -0.63
SYNM-201ENST00000328642 HIGD2AQ9BW72 106 aa11.09□□□□□ -0.63
SYNM-201ENST00000328642 A0A087WYN8 130 aa11.08□□□□□ -0.64
SYNM-201ENST00000328642 SCXQ7RTU7 201 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms