RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 LYSTQ99698 3801 aa17.84■□□□□ 0.45
TM6SF1-202ENST00000322019 GAGE12HA6NDE8 117 aa17.84■□□□□ 0.45
TM6SF1-202ENST00000322019 RPL24P83731 157 aaKnown RBP17.83■□□□□ 0.44
TM6SF1-202ENST00000322019 PRO1854Q9UHT4 67 aa17.83■□□□□ 0.44
TM6SF1-202ENST00000322019 TIMM17BO60830 172 aa17.82■□□□□ 0.44
TM6SF1-202ENST00000322019 WFDC2Q14508 124 aa17.82■□□□□ 0.44
TM6SF1-202ENST00000322019 PRO0461Q9UI25 63 aa17.82■□□□□ 0.44
TM6SF1-202ENST00000322019 K7ERU9 68 aa17.81■□□□□ 0.44
TM6SF1-202ENST00000322019 CRPP02741 224 aa17.81■□□□□ 0.44
TM6SF1-202ENST00000322019 C2orf82Q6UX34 121 aa17.81■□□□□ 0.44
TM6SF1-202ENST00000322019 MTURNQ8N3F0 131 aa17.81■□□□□ 0.44
TM6SF1-202ENST00000322019 LOC107984156A0A0G2JMH3 177 aa17.81■□□□□ 0.44
TM6SF1-202ENST00000322019 C6orf226Q5I0X4 101 aa17.81■□□□□ 0.44
TM6SF1-202ENST00000322019 ARL17AQ8IVW1 177 aa17.81■□□□□ 0.44
TM6SF1-202ENST00000322019 MALP21145 153 aa17.8■□□□□ 0.44
TM6SF1-202ENST00000322019 CIRBPQ14011 172 aaKnown RBP17.8■□□□□ 0.44
TM6SF1-202ENST00000322019 C15orf53Q8NAA6 179 aa17.8■□□□□ 0.44
TM6SF1-202ENST00000322019 HERV-K104P63124 156 aa17.79■□□□□ 0.44
TM6SF1-202ENST00000322019 LINC00588Q9Y4M8 146 aa17.79■□□□□ 0.44
TM6SF1-202ENST00000322019 A0A0B4J2C4 111 aa17.79■□□□□ 0.44
TM6SF1-202ENST00000322019 F8W1H4 67 aa17.79■□□□□ 0.44
TM6SF1-202ENST00000322019 CBY1Q9Y3M2 126 aa17.78■□□□□ 0.44
TM6SF1-202ENST00000322019 CSMD3Q7Z407 3707 aa17.77■□□□□ 0.44
TM6SF1-202ENST00000322019 SOSTDC1Q6X4U4 206 aa17.76■□□□□ 0.43
TM6SF1-202ENST00000322019 Q8IZM0 81 aa17.76■□□□□ 0.43
TM6SF1-202ENST00000322019 LINC00526Q96FQ7 95 aa17.76■□□□□ 0.43
TM6SF1-202ENST00000322019 PSMB2P49721 201 aa17.75■□□□□ 0.43
TM6SF1-202ENST00000322019 LINC00308Q8TCZ7 52 aa17.75■□□□□ 0.43
TM6SF1-202ENST00000322019 KIAA0087Q14695 138 aa17.75■□□□□ 0.43
TM6SF1-202ENST00000322019 LINC01556Q5JQF7 62 aa17.75■□□□□ 0.43
TM6SF1-202ENST00000322019 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.74■□□□□ 0.43
TM6SF1-202ENST00000322019 PFN2P35080 140 aa17.73■□□□□ 0.43
TM6SF1-202ENST00000322019 LINC01561Q8N1V8 128 aa17.73■□□□□ 0.43
TM6SF1-202ENST00000322019 TCL1BO95988 128 aa17.73■□□□□ 0.43
TM6SF1-202ENST00000322019 H7C2G1 150 aa17.71■□□□□ 0.43
TM6SF1-202ENST00000322019 MIR7-3HGQ8N6C7 128 aa17.71■□□□□ 0.43
TM6SF1-202ENST00000322019 LINC00158P58513 81 aa17.71■□□□□ 0.43
TM6SF1-202ENST00000322019 C6orf223Q8N319 242 aa17.71■□□□□ 0.43
TM6SF1-202ENST00000322019 VPS25Q9BRG1 176 aa17.71■□□□□ 0.43
TM6SF1-202ENST00000322019 ERG28Q9UKR5 140 aa17.71■□□□□ 0.43
TM6SF1-202ENST00000322019 SMCPP49901 116 aaPredicted RBP17.7■□□□□ 0.42
TM6SF1-202ENST00000322019 CKS1BP61024 79 aa17.7■□□□□ 0.42
TM6SF1-202ENST00000322019 TRAV8-4A0A0B4J246 113 aa17.7■□□□□ 0.42
TM6SF1-202ENST00000322019 LYRM7Q5U5X0 104 aa17.7■□□□□ 0.42
TM6SF1-202ENST00000322019 IFITM1P13164 125 aa17.69■□□□□ 0.42
TM6SF1-202ENST00000322019 CCL18P55774 89 aa17.69■□□□□ 0.42
TM6SF1-202ENST00000322019 CFAP161Q6P656 301 aa17.69■□□□□ 0.42
TM6SF1-202ENST00000322019 TENM2Q9NT68 2774 aa17.69■□□□□ 0.42
TM6SF1-202ENST00000322019 DNAH10OSP0CZ25 163 aa17.68■□□□□ 0.42
TM6SF1-202ENST00000322019 ETDBQ3ZM63 59 aa17.68■□□□□ 0.42
TM6SF1-202ENST00000322019 KRTAP26-1Q6PEX3 210 aa17.68■□□□□ 0.42
TM6SF1-202ENST00000322019 Q9HAA7 133 aa17.68■□□□□ 0.42
TM6SF1-202ENST00000322019 SPAG11BQ08648 103 aa17.67■□□□□ 0.42
TM6SF1-202ENST00000322019 C9orf116Q5BN46 136 aaPredicted RBP17.66■□□□□ 0.42
TM6SF1-202ENST00000322019 DYNC2H1Q8NCM8 4307 aaKnown RBP17.65■□□□□ 0.42
TM6SF1-202ENST00000322019 IBA57-AS1B1ANH7 110 aa17.65■□□□□ 0.42
TM6SF1-202ENST00000322019 SCGB1C2P0DMR2 95 aa17.65■□□□□ 0.42
TM6SF1-202ENST00000322019 KLK5Q9Y337 293 aaPredicted RBP17.65■□□□□ 0.42
TM6SF1-202ENST00000322019 DNAH1Q9P2D7 4330 aa17.65■□□□□ 0.42
TM6SF1-202ENST00000322019 TRBV20-1A0A075B6N2 111 aa17.64■□□□□ 0.41
TM6SF1-202ENST00000322019 C10orf25Q5T742 122 aa17.64■□□□□ 0.41
TM6SF1-202ENST00000322019 IGKV2D-24A0A075B6R9 120 aa17.63■□□□□ 0.41
TM6SF1-202ENST00000322019 Q1RN00 199 aa17.62■□□□□ 0.41
TM6SF1-202ENST00000322019 UNQ6190/PRO20217Q6UXQ8 127 aa17.62■□□□□ 0.41
TM6SF1-202ENST00000322019 C1orf43Q9BWL3 253 aa17.62■□□□□ 0.41
TM6SF1-202ENST00000322019 DNAH7Q8WXX0 4024 aa17.62■□□□□ 0.41
TM6SF1-202ENST00000322019 HIGD2BQ4VC39 106 aa17.62■□□□□ 0.41
TM6SF1-202ENST00000322019 NHLRC4P0CG21 123 aaPredicted RBP17.61■□□□□ 0.41
TM6SF1-202ENST00000322019 PLECQ15149 4684 aaKnown RBP17.61■□□□□ 0.41
TM6SF1-202ENST00000322019 TRIAP1O43715 76 aa17.59■□□□□ 0.41
TM6SF1-202ENST00000322019 CXCL5P42830 114 aa17.58■□□□□ 0.4
TM6SF1-202ENST00000322019 TRBV30A0A0K0K1B3 111 aa17.57■□□□□ 0.4
TM6SF1-202ENST00000322019 APLNQ9ULZ1 77 aa17.57■□□□□ 0.4
TM6SF1-202ENST00000322019 RPL13AP40429 203 aaKnown RBP17.56■□□□□ 0.4
TM6SF1-202ENST00000322019 STARD9Q9P2P6 4700 aa17.56■□□□□ 0.4
TM6SF1-202ENST00000322019 C15orf56Q8N910 161 aa17.56■□□□□ 0.4
TM6SF1-202ENST00000322019 COPS9Q8WXC6 57 aa17.56■□□□□ 0.4
TM6SF1-202ENST00000322019 UPK3BQ9BT76 320 aa17.55■□□□□ 0.4
TM6SF1-202ENST00000322019 SND1-IT1Q9HBX3 110 aa17.55■□□□□ 0.4
TM6SF1-202ENST00000322019 NTN5Q8WTR8 489 aaPredicted RBP17.52■□□□□ 0.4
TM6SF1-202ENST00000322019 FBN3Q75N90 2809 aa17.52■□□□□ 0.4
TM6SF1-202ENST00000322019 CASC10Q5T4H9 136 aa17.52■□□□□ 0.39
TM6SF1-202ENST00000322019 IGKV2-28A0A075B6P5 120 aa17.51■□□□□ 0.39
TM6SF1-202ENST00000322019 IGKV2D-28P01615 120 aa17.51■□□□□ 0.39
TM6SF1-202ENST00000322019 ZNF561-AS1K7EIQ3 104 aa17.5■□□□□ 0.39
TM6SF1-202ENST00000322019 DNAH10Q8IVF4 4471 aa17.5■□□□□ 0.39
TM6SF1-202ENST00000322019 KRTAP21-3Q3LHN1 58 aa17.49■□□□□ 0.39
TM6SF1-202ENST00000322019 C6orf48Q9UBA6 75 aa17.49■□□□□ 0.39
TM6SF1-202ENST00000322019 C9JAW5 83 aa17.49■□□□□ 0.39
TM6SF1-202ENST00000322019 PCP4P48539 62 aa17.49■□□□□ 0.39
TM6SF1-202ENST00000322019 UBE2DNLQ8IWF7 75 aa17.49■□□□□ 0.39
TM6SF1-202ENST00000322019 KRTAP1-5Q9BYS1 174 aa17.49■□□□□ 0.39
TM6SF1-202ENST00000322019 ATXN8Q156A1 80 aa17.48■□□□□ 0.39
TM6SF1-202ENST00000322019 LINC00337Q8N6G1 96 aa17.48■□□□□ 0.39
TM6SF1-202ENST00000322019 SLC25A20O43772 301 aa17.46■□□□□ 0.39
TM6SF1-202ENST00000322019 COX17Q14061 63 aa17.46■□□□□ 0.39
TM6SF1-202ENST00000322019 CARD19Q96LW7 228 aa17.46■□□□□ 0.39
TM6SF1-202ENST00000322019 CAMK2N2Q96S95 79 aa17.46■□□□□ 0.39
TM6SF1-202ENST00000322019 J3QR89 54 aa17.46■□□□□ 0.39
TM6SF1-202ENST00000322019 LINC01620Q4KN68 170 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms