RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 Q8IZM0 81 aa11.62□□□□□ -0.55
SSR4-201ENST00000320857 IBA57-AS1B1ANH7 110 aa11.61□□□□□ -0.55
SSR4-201ENST00000320857 NANOS2P60321 138 aaKnown RBP11.61□□□□□ -0.55
SSR4-201ENST00000320857 DEFB121Q5J5C9 76 aa11.61□□□□□ -0.55
SSR4-201ENST00000320857 TM2D3Q9BRN9 247 aa11.6□□□□□ -0.55
SSR4-201ENST00000320857 DEFB131BA0A096LNP1 70 aa11.59□□□□□ -0.55
SSR4-201ENST00000320857 IGLV10-54A0A075B6I4 117 aa11.59□□□□□ -0.55
SSR4-201ENST00000320857 TRBV30A0A0K0K1B3 111 aa11.59□□□□□ -0.55
SSR4-201ENST00000320857 MALP21145 153 aa11.59□□□□□ -0.55
SSR4-201ENST00000320857 LINC00158P58513 81 aa11.59□□□□□ -0.55
SSR4-201ENST00000320857 OCIAD2Q56VL3 154 aa11.59□□□□□ -0.55
SSR4-201ENST00000320857 SOSTDC1Q6X4U4 206 aa11.59□□□□□ -0.55
SSR4-201ENST00000320857 PRR34Q9NV39 138 aa11.59□□□□□ -0.55
SSR4-201ENST00000320857 KLK12Q9UKR0 248 aa11.58□□□□□ -0.56
SSR4-201ENST00000320857 TCL1BO95988 128 aa11.57□□□□□ -0.56
SSR4-201ENST00000320857 RPL13AP40429 203 aaKnown RBP11.57□□□□□ -0.56
SSR4-201ENST00000320857 CXCL5P42830 114 aa11.57□□□□□ -0.56
SSR4-201ENST00000320857 MIR7-3HGQ8N6C7 128 aa11.57□□□□□ -0.56
SSR4-201ENST00000320857 MRAPQ8TCY5 172 aa11.57□□□□□ -0.56
SSR4-201ENST00000320857 FOXI1Q12951 378 aa11.56□□□□□ -0.56
SSR4-201ENST00000320857 CFAP161Q6P656 301 aa11.56□□□□□ -0.56
SSR4-201ENST00000320857 CRPP02741 224 aa11.55□□□□□ -0.56
SSR4-201ENST00000320857 CKS1BP61024 79 aa11.55□□□□□ -0.56
SSR4-201ENST00000320857 PRO0461Q9UI25 63 aa11.55□□□□□ -0.56
SSR4-201ENST00000320857 GAGE12HA6NDE8 117 aa11.55□□□□□ -0.56
SSR4-201ENST00000320857 K7ERU9 68 aa11.55□□□□□ -0.56
SSR4-201ENST00000320857 COX6CP09669 75 aa11.55□□□□□ -0.56
SSR4-201ENST00000320857 WFDC2Q14508 124 aa11.55□□□□□ -0.56
SSR4-201ENST00000320857 TRAV8-4A0A0B4J246 113 aa11.54□□□□□ -0.56
SSR4-201ENST00000320857 TRIAP1O43715 76 aa11.54□□□□□ -0.56
SSR4-201ENST00000320857 KIAA0087Q14695 138 aa11.53□□□□□ -0.56
SSR4-201ENST00000320857 ENHOQ6UWT2 76 aa11.53□□□□□ -0.56
SSR4-201ENST00000320857 WFDC10BQ8IUB3 73 aa11.53□□□□□ -0.56
SSR4-201ENST00000320857 MEGF8Q7Z7M0 2845 aa11.53□□□□□ -0.56
SSR4-201ENST00000320857 TRAV10A0A0B4J240 114 aa11.52□□□□□ -0.56
SSR4-201ENST00000320857 PFN2P35080 140 aa11.52□□□□□ -0.56
SSR4-201ENST00000320857 ATXN8Q156A1 80 aa11.52□□□□□ -0.56
SSR4-201ENST00000320857 ESRGQ1W209 222 aa11.52□□□□□ -0.56
SSR4-201ENST00000320857 KLK5Q9Y337 293 aaPredicted RBP11.52□□□□□ -0.56
SSR4-201ENST00000320857 TENM3Q9P273 2699 aa11.52□□□□□ -0.57
SSR4-201ENST00000320857 UBE2WQ96B02 151 aa11.52□□□□□ -0.57
SSR4-201ENST00000320857 C2orf82Q6UX34 121 aa11.51□□□□□ -0.57
SSR4-201ENST00000320857 MTURNQ8N3F0 131 aa11.51□□□□□ -0.57
SSR4-201ENST00000320857 SND1-IT1Q9HBX3 110 aa11.51□□□□□ -0.57
SSR4-201ENST00000320857 TRAV13-2A0A0B4J235 113 aa11.5□□□□□ -0.57
SSR4-201ENST00000320857 CCL18P55774 89 aa11.49□□□□□ -0.57
SSR4-201ENST00000320857 C15orf53Q8NAA6 179 aa11.49□□□□□ -0.57
SSR4-201ENST00000320857 COX17Q14061 63 aa11.49□□□□□ -0.57
SSR4-201ENST00000320857 SPAG11BQ08648 103 aa11.48□□□□□ -0.57
SSR4-201ENST00000320857 FBN3Q75N90 2809 aa11.47□□□□□ -0.57
SSR4-201ENST00000320857 SMCPP49901 116 aaPredicted RBP11.47□□□□□ -0.57
SSR4-201ENST00000320857 ETDBQ3ZM63 59 aa11.47□□□□□ -0.57
SSR4-201ENST00000320857 LINC01556Q5JQF7 62 aa11.47□□□□□ -0.57
SSR4-201ENST00000320857 C9JAW5 83 aa11.45□□□□□ -0.58
SSR4-201ENST00000320857 RNF151Q2KHN1 245 aa11.45□□□□□ -0.58
SSR4-201ENST00000320857 LINC01620Q4KN68 170 aa11.45□□□□□ -0.58
SSR4-201ENST00000320857 M0QXV9 152 aa11.44□□□□□ -0.58
SSR4-201ENST00000320857 HUWE1Q7Z6Z7 4374 aaKnown RBP11.44□□□□□ -0.58
SSR4-201ENST00000320857 IGKV2-28A0A075B6P5 120 aa11.43□□□□□ -0.58
SSR4-201ENST00000320857 J3QR89 54 aa11.43□□□□□ -0.58
SSR4-201ENST00000320857 SLC25A20O43772 301 aa11.43□□□□□ -0.58
SSR4-201ENST00000320857 IGKV2D-28P01615 120 aa11.43□□□□□ -0.58
SSR4-201ENST00000320857 MUC7Q8TAX7 377 aa11.43□□□□□ -0.58
SSR4-201ENST00000320857 LINC00337Q8N6G1 96 aa11.43□□□□□ -0.58
SSR4-201ENST00000320857 LST1O00453 97 aa11.42□□□□□ -0.58
SSR4-201ENST00000320857 CLEC2BQ92478 149 aa11.42□□□□□ -0.58
SSR4-201ENST00000320857 PRKDCP78527 4128 aaKnown RBP11.41□□□□□ -0.58
SSR4-201ENST00000320857 TRBV10-2A0A0K0K1G8 114 aa11.4□□□□□ -0.58
SSR4-201ENST00000320857 DNAH10OSP0CZ25 163 aa11.4□□□□□ -0.58
SSR4-201ENST00000320857 RPL28P46779 137 aaKnown RBP11.4□□□□□ -0.58
SSR4-201ENST00000320857 KRTAP26-1Q6PEX3 210 aa11.4□□□□□ -0.58
SSR4-201ENST00000320857 UNQ6190/PRO20217Q6UXQ8 127 aa11.4□□□□□ -0.58
SSR4-201ENST00000320857 C6orf223Q8N319 242 aa11.4□□□□□ -0.58
SSR4-201ENST00000320857 B9D2Q9BPU9 175 aa11.4□□□□□ -0.58
SSR4-201ENST00000320857 C1orf43Q9BWL3 253 aa11.4□□□□□ -0.58
SSR4-201ENST00000320857 TEN1Q86WV5 123 aa11.4□□□□□ -0.59
SSR4-201ENST00000320857 NTN5Q8WTR8 489 aaPredicted RBP11.4□□□□□ -0.59
SSR4-201ENST00000320857 VPS25Q9BRG1 176 aa11.4□□□□□ -0.59
SSR4-201ENST00000320857 GVQW2A0A096LPI5 108 aaPredicted RBP11.39□□□□□ -0.59
SSR4-201ENST00000320857 ANKRD29Q8N6D5 301 aa11.39□□□□□ -0.59
SSR4-201ENST00000320857 LINC01600Q96MT4 127 aa11.39□□□□□ -0.59
SSR4-201ENST00000320857 NDUFC2O95298 119 aa11.38□□□□□ -0.59
SSR4-201ENST00000320857 C9orf116Q5BN46 136 aaPredicted RBP11.38□□□□□ -0.59
SSR4-201ENST00000320857 C10orf25Q5T742 122 aa11.38□□□□□ -0.59
SSR4-201ENST00000320857 ZNF561-AS1K7EIQ3 104 aa11.37□□□□□ -0.59
SSR4-201ENST00000320857 LINC00526Q96FQ7 95 aa11.37□□□□□ -0.59
SSR4-201ENST00000320857 CBY1Q9Y3M2 126 aa11.37□□□□□ -0.59
SSR4-201ENST00000320857 LINC00588Q9Y4M8 146 aa11.37□□□□□ -0.59
SSR4-201ENST00000320857 DNAH9Q9NYC9 4486 aa11.37□□□□□ -0.59
SSR4-201ENST00000320857 OR13C6PQ8NH95 151 aa11.36□□□□□ -0.59
SSR4-201ENST00000320857 PPDPFLQ8WWR9 84 aa11.36□□□□□ -0.59
SSR4-201ENST00000320857 H3BT86 120 aa11.36□□□□□ -0.59
SSR4-201ENST00000320857 IGKV2D-24A0A075B6R9 120 aa11.35□□□□□ -0.59
SSR4-201ENST00000320857 SMIM11BQ8TCY0 68 aa11.35□□□□□ -0.59
SSR4-201ENST00000320857 F8WDY8 70 aa11.33□□□□□ -0.6
SSR4-201ENST00000320857 TRACP01848 142 aa11.33□□□□□ -0.6
SSR4-201ENST00000320857 HIGD2BQ4VC39 106 aa11.33□□□□□ -0.6
SSR4-201ENST00000320857 C2orf48Q96LS8 159 aa11.33□□□□□ -0.6
SSR4-201ENST00000320857 CAMK2N2Q96S95 79 aa11.33□□□□□ -0.6
SSR4-201ENST00000320857 C6orf48Q9UBA6 75 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms