RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CHCHD7Q9BUK0 85 aa9.09□□□□□ -0.95
RETREG3-201ENST00000309428 PYGO1Q9Y3Y4 419 aa9.09□□□□□ -0.95
RETREG3-201ENST00000309428 DAD1P61803 113 aa9.09□□□□□ -0.96
RETREG3-201ENST00000309428 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.96
RETREG3-201ENST00000309428 SMIM11BQ8TCY0 68 aa9.09□□□□□ -0.96
RETREG3-201ENST00000309428 LINC01006Q8NI28 216 aa9.08□□□□□ -0.96
RETREG3-201ENST00000309428 OVOL2Q9BRP0 275 aa9.08□□□□□ -0.96
RETREG3-201ENST00000309428 FBN1P35555 2871 aaKnown RBP9.08□□□□□ -0.96
RETREG3-201ENST00000309428 A0A087WYN8 130 aa9.08□□□□□ -0.96
RETREG3-201ENST00000309428 Q6Q795 121 aa9.08□□□□□ -0.96
RETREG3-201ENST00000309428 FAM19A4Q96LR4 140 aa9.08□□□□□ -0.96
RETREG3-201ENST00000309428 USP17L23D6RBM5 183 aa9.07□□□□□ -0.96
RETREG3-201ENST00000309428 RBM3P98179 157 aaKnown RBP9.07□□□□□ -0.96
RETREG3-201ENST00000309428 C4orf3Q8WVX3 66 aa9.07□□□□□ -0.96
RETREG3-201ENST00000309428 FAM110AQ9BQ89 295 aa9.07□□□□□ -0.96
RETREG3-201ENST00000309428 TRAV25A0A0B4J276 109 aa9.07□□□□□ -0.96
RETREG3-201ENST00000309428 CXCL5P42830 114 aa9.07□□□□□ -0.96
RETREG3-201ENST00000309428 FAM218AQ96MZ4 157 aa9.07□□□□□ -0.96
RETREG3-201ENST00000309428 SMIM1B2RUZ4 78 aa9.06□□□□□ -0.96
RETREG3-201ENST00000309428 FAM19A5Q7Z5A7 132 aaPredicted RBP9.06□□□□□ -0.96
RETREG3-201ENST00000309428 C1orf43Q9BWL3 253 aa9.06□□□□□ -0.96
RETREG3-201ENST00000309428 TMEM89A2RUT3 159 aa9.06□□□□□ -0.96
RETREG3-201ENST00000309428 COX7CP15954 63 aa9.06□□□□□ -0.96
RETREG3-201ENST00000309428 DEFB135Q30KP9 77 aa9.06□□□□□ -0.96
RETREG3-201ENST00000309428 SOSTDC1Q6X4U4 206 aa9.06□□□□□ -0.96
RETREG3-201ENST00000309428 HRCT1Q6UXD1 115 aa9.06□□□□□ -0.96
RETREG3-201ENST00000309428 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.06□□□□□ -0.96
RETREG3-201ENST00000309428 GYPEP15421 78 aa9.05□□□□□ -0.96
RETREG3-201ENST00000309428 C1orf158Q8N1D5 194 aa9.05□□□□□ -0.96
RETREG3-201ENST00000309428 H0YGX0 51 aa9.05□□□□□ -0.96
RETREG3-201ENST00000309428 NSD1Q96L73 2696 aaPredicted RBP9.05□□□□□ -0.96
RETREG3-201ENST00000309428 INAFM1C9JVW0 142 aa9.04□□□□□ -0.96
RETREG3-201ENST00000309428 HILS1P60008 231 aa9.04□□□□□ -0.96
RETREG3-201ENST00000309428 SNURFQ9Y675 71 aa9.04□□□□□ -0.96
RETREG3-201ENST00000309428 A0A096LNT2 108 aa9.03□□□□□ -0.96
RETREG3-201ENST00000309428 CCL18P55774 89 aa9.03□□□□□ -0.96
RETREG3-201ENST00000309428 LINC00846Q9NV44 126 aa9.03□□□□□ -0.96
RETREG3-201ENST00000309428 J3QKU1 62 aa9.03□□□□□ -0.96
RETREG3-201ENST00000309428 KIR2DL5BQ8NHK3 375 aa9.03□□□□□ -0.96
RETREG3-201ENST00000309428 RPL18AQ02543 176 aaKnown RBP9.02□□□□□ -0.96
RETREG3-201ENST00000309428 MRAPQ8TCY5 172 aa9.02□□□□□ -0.96
RETREG3-201ENST00000309428 SMCR5Q8TEV8 140 aa9.02□□□□□ -0.96
RETREG3-201ENST00000309428 LINC00337Q8N6G1 96 aa9.02□□□□□ -0.97
RETREG3-201ENST00000309428 LITAFQ99732 161 aa9.02□□□□□ -0.97
RETREG3-201ENST00000309428 IGHV4-28A0A0C4DH34 117 aa9.02□□□□□ -0.97
RETREG3-201ENST00000309428 FAM240AA0A1B0GVK7 77 aa9.02□□□□□ -0.97
RETREG3-201ENST00000309428 LINC00269Q8N2A0 174 aa9.02□□□□□ -0.97
RETREG3-201ENST00000309428 F5H768 121 aa9.01□□□□□ -0.97
RETREG3-201ENST00000309428 A8MTW9 85 aa9.01□□□□□ -0.97
RETREG3-201ENST00000309428 DEFB105AQ8NG35 78 aa9.01□□□□□ -0.97
RETREG3-201ENST00000309428 BAHCC1Q9P281 2608 aa9.01□□□□□ -0.97
RETREG3-201ENST00000309428 IGLV4-60A0A075B6I1 120 aa9□□□□□ -0.97
RETREG3-201ENST00000309428 C6orf99Q4VX62 202 aa9□□□□□ -0.97
RETREG3-201ENST00000309428 C9orf116Q5BN46 136 aaPredicted RBP9□□□□□ -0.97
RETREG3-201ENST00000309428 FAM19A1Q7Z5A9 133 aa9□□□□□ -0.97
RETREG3-201ENST00000309428 UPK3BQ9BT76 320 aa9□□□□□ -0.97
RETREG3-201ENST00000309428 IMUPQ9GZP8 106 aa8.99□□□□□ -0.97
RETREG3-201ENST00000309428 CDC42SE2Q9NRR3 84 aa8.99□□□□□ -0.97
RETREG3-201ENST00000309428 SERP2Q8N6R1 65 aa8.99□□□□□ -0.97
RETREG3-201ENST00000309428 SPATA3Q8NHX4 192 aa8.99□□□□□ -0.97
RETREG3-201ENST00000309428 SMIM9A6NGZ8 99 aa8.98□□□□□ -0.97
RETREG3-201ENST00000309428 TIMM17BO60830 172 aa8.98□□□□□ -0.97
RETREG3-201ENST00000309428 PKIGQ9Y2B9 76 aa8.98□□□□□ -0.97
RETREG3-201ENST00000309428 LRRC75A-AS1Q8N1F1 130 aa8.98□□□□□ -0.97
RETREG3-201ENST00000309428 XAGE1AQ9HD64 81 aa8.98□□□□□ -0.97
RETREG3-201ENST00000309428 Q8N3U1 123 aa8.97□□□□□ -0.97
RETREG3-201ENST00000309428 CSDC2Q9Y534 153 aaKnown RBP8.97□□□□□ -0.97
RETREG3-201ENST00000309428 C5orf47Q569G3 176 aa8.97□□□□□ -0.97
RETREG3-201ENST00000309428 C11orf72Q8NBR9 251 aa8.97□□□□□ -0.97
RETREG3-201ENST00000309428 TRBV7-7A0A0K0K1E9 115 aa8.97□□□□□ -0.97
RETREG3-201ENST00000309428 A0A0U1RQV1 116 aa8.97□□□□□ -0.97
RETREG3-201ENST00000309428 NTM-AS1Q6ZSK4 140 aa8.96□□□□□ -0.98
RETREG3-201ENST00000309428 MPLKIPQ8TAP9 179 aa8.95□□□□□ -0.98
RETREG3-201ENST00000309428 AKAP9Q99996 3911 aa8.95□□□□□ -0.98
RETREG3-201ENST00000309428 KLK9Q2XQG4 91 aa8.95□□□□□ -0.98
RETREG3-201ENST00000309428 TRBV10-1A0A0K0K1A3 114 aa8.95□□□□□ -0.98
RETREG3-201ENST00000309428 PKD1L1Q8TDX9 2849 aa8.94□□□□□ -0.98
RETREG3-201ENST00000309428 TRRAPQ9Y4A5 3859 aa8.93□□□□□ -0.98
RETREG3-201ENST00000309428 LY6G6DO95868 133 aa8.93□□□□□ -0.98
RETREG3-201ENST00000309428 FAM222AQ5U5X8 452 aa8.93□□□□□ -0.98
RETREG3-201ENST00000309428 TRBV6-8A0A0A6YYG3 113 aa8.93□□□□□ -0.98
RETREG3-201ENST00000309428 C9orf129Q5T035 196 aaKnown RBP8.93□□□□□ -0.98
RETREG3-201ENST00000309428 KLK12Q9UKR0 248 aa8.93□□□□□ -0.98
RETREG3-201ENST00000309428 JMJD7-PLA2G4BH0Y9G9 81 aa8.92□□□□□ -0.98
RETREG3-201ENST00000309428 KRTAP1-3Q8IUG1 177 aa8.92□□□□□ -0.98
RETREG3-201ENST00000309428 BRK1Q8WUW1 75 aa8.92□□□□□ -0.98
RETREG3-201ENST00000309428 TMEM256-PLSCR3K7ERE1 68 aa8.92□□□□□ -0.98
RETREG3-201ENST00000309428 C4orf26Q17RF5 130 aa8.92□□□□□ -0.98
RETREG3-201ENST00000309428 RPL28P46779 137 aaKnown RBP8.91□□□□□ -0.98
RETREG3-201ENST00000309428 Q6ZQY7 126 aa8.91□□□□□ -0.98
RETREG3-201ENST00000309428 IBA57-AS1B1ANH7 110 aa8.91□□□□□ -0.98
RETREG3-201ENST00000309428 BRI3O95415 125 aa8.91□□□□□ -0.98
RETREG3-201ENST00000309428 FAM236DA0A1B0GTK5 79 aa8.91□□□□□ -0.98
RETREG3-201ENST00000309428 ZNF561-AS1K7EIQ3 104 aa8.91□□□□□ -0.98
RETREG3-201ENST00000309428 FAM236CP0DP71 79 aa8.91□□□□□ -0.98
RETREG3-201ENST00000309428 C16orf74Q96GX8 76 aa8.91□□□□□ -0.98
RETREG3-201ENST00000309428 FSHBP01225 129 aa8.9□□□□□ -0.98
RETREG3-201ENST00000309428 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
RETREG3-201ENST00000309428 HIGD2BQ4VC39 106 aa8.9□□□□□ -0.99
RETREG3-201ENST00000309428 LINC00959A0A1B0GUT2 108 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms