RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 IFITM1P13164 125 aa8.05□□□□□ -1.12
TRIM40-205ENST00000307859 FOXI1Q12951 378 aa8.05□□□□□ -1.12
TRIM40-205ENST00000307859 SFTA2Q6UW10 78 aa8.05□□□□□ -1.12
TRIM40-205ENST00000307859 ENHOQ6UWT2 76 aa8.05□□□□□ -1.12
TRIM40-205ENST00000307859 TOMM7Q9P0U1 55 aa8.05□□□□□ -1.12
TRIM40-205ENST00000307859 A0A0B4J2C4 111 aa8.04□□□□□ -1.12
TRIM40-205ENST00000307859 APOMO95445 188 aa8.04□□□□□ -1.12
TRIM40-205ENST00000307859 IGHV3-33P01772 117 aa8.04□□□□□ -1.12
TRIM40-205ENST00000307859 Q8IZM0 81 aa8.04□□□□□ -1.12
TRIM40-205ENST00000307859 IGLV10-54A0A075B6I4 117 aa8.03□□□□□ -1.12
TRIM40-205ENST00000307859 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.03□□□□□ -1.12
TRIM40-205ENST00000307859 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
TRIM40-205ENST00000307859 PRSS2P07478 247 aa8.03□□□□□ -1.12
TRIM40-205ENST00000307859 PPDPFQ9H3Y8 114 aa8.03□□□□□ -1.12
TRIM40-205ENST00000307859 TRAV8-4A0A0B4J246 113 aa8.03□□□□□ -1.12
TRIM40-205ENST00000307859 LINC01556Q5JQF7 62 aa8.03□□□□□ -1.12
TRIM40-205ENST00000307859 MEIG1Q5JSS6 88 aa8.03□□□□□ -1.12
TRIM40-205ENST00000307859 PGPEP1Q9NXJ5 209 aa8.03□□□□□ -1.12
TRIM40-205ENST00000307859 HYDINQ4G0P3 5121 aa8.03□□□□□ -1.12
TRIM40-205ENST00000307859 K7EP34 96 aa8.02□□□□□ -1.13
TRIM40-205ENST00000307859 CRPP02741 224 aa8.02□□□□□ -1.13
TRIM40-205ENST00000307859 FABP2P12104 132 aa8.02□□□□□ -1.13
TRIM40-205ENST00000307859 DAND5Q8N907 189 aa8.02□□□□□ -1.13
TRIM40-205ENST00000307859 LINC00308Q8TCZ7 52 aa8.02□□□□□ -1.13
TRIM40-205ENST00000307859 PRO1854Q9UHT4 67 aa8.02□□□□□ -1.13
TRIM40-205ENST00000307859 GAGE12HA6NDE8 117 aa8.01□□□□□ -1.13
TRIM40-205ENST00000307859 TSPAN13O95857 204 aa8.01□□□□□ -1.13
TRIM40-205ENST00000307859 KIAA0087Q14695 138 aa8.01□□□□□ -1.13
TRIM40-205ENST00000307859 COPS9Q8WXC6 57 aa8.01□□□□□ -1.13
TRIM40-205ENST00000307859 IBA57-AS1B1ANH7 110 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 DNAH10OSP0CZ25 163 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 C6orf226Q5I0X4 101 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 GTF2H5Q6ZYL4 71 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 UBE2WQ96B02 151 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 SPCS1Q9Y6A9 102 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 HERC2O95714 4834 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 STAB2Q8WWQ8 2551 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 GAGE10A6NGK3 116 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 MALP21145 153 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 CXCL5P42830 114 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 NPC2P61916 151 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 SOSTDC1Q6X4U4 206 aa8□□□□□ -1.13
TRIM40-205ENST00000307859 KLK5Q9Y337 293 aaPredicted RBP8□□□□□ -1.13
TRIM40-205ENST00000307859 A0A0U1RRA0 63 aa7.99□□□□□ -1.13
TRIM40-205ENST00000307859 KRTAP26-1Q6PEX3 210 aa7.99□□□□□ -1.13
TRIM40-205ENST00000307859 ERG28Q9UKR5 140 aa7.98□□□□□ -1.13
TRIM40-205ENST00000307859 LINC00588Q9Y4M8 146 aa7.98□□□□□ -1.13
TRIM40-205ENST00000307859 CFAP161Q6P656 301 aa7.97□□□□□ -1.13
TRIM40-205ENST00000307859 C2orf82Q6UX34 121 aa7.97□□□□□ -1.13
TRIM40-205ENST00000307859 MIR7-3HGQ8N6C7 128 aa7.97□□□□□ -1.13
TRIM40-205ENST00000307859 CCL18P55774 89 aa7.96□□□□□ -1.13
TRIM40-205ENST00000307859 CKS1BP61024 79 aa7.96□□□□□ -1.13
TRIM40-205ENST00000307859 LINC00158P58513 81 aa7.96□□□□□ -1.14
TRIM40-205ENST00000307859 SPAG11BQ08648 103 aa7.96□□□□□ -1.14
TRIM40-205ENST00000307859 UPK3BQ9BT76 320 aa7.96□□□□□ -1.14
TRIM40-205ENST00000307859 PCLOQ9Y6V0 5065 aa7.95□□□□□ -1.14
TRIM40-205ENST00000307859 LYRM7Q5U5X0 104 aa7.95□□□□□ -1.14
TRIM40-205ENST00000307859 PFN2P35080 140 aa7.94□□□□□ -1.14
TRIM40-205ENST00000307859 COX17Q14061 63 aa7.94□□□□□ -1.14
TRIM40-205ENST00000307859 C1orf43Q9BWL3 253 aa7.93□□□□□ -1.14
TRIM40-205ENST00000307859 LOC107984156A0A0G2JMH3 177 aa7.92□□□□□ -1.14
TRIM40-205ENST00000307859 TRBV30A0A0K0K1B3 111 aa7.92□□□□□ -1.14
TRIM40-205ENST00000307859 ARL17AQ8IVW1 177 aa7.92□□□□□ -1.14
TRIM40-205ENST00000307859 H7C2G1 150 aa7.92□□□□□ -1.14
TRIM40-205ENST00000307859 RPL13AP40429 203 aaKnown RBP7.92□□□□□ -1.14
TRIM40-205ENST00000307859 Q1RN00 199 aa7.92□□□□□ -1.14
TRIM40-205ENST00000307859 C6orf223Q8N319 242 aa7.92□□□□□ -1.14
TRIM40-205ENST00000307859 NTN5Q8WTR8 489 aaPredicted RBP7.92□□□□□ -1.14
TRIM40-205ENST00000307859 SND1-IT1Q9HBX3 110 aa7.92□□□□□ -1.14
TRIM40-205ENST00000307859 CBY1Q9Y3M2 126 aa7.92□□□□□ -1.14
TRIM40-205ENST00000307859 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
TRIM40-205ENST00000307859 C15orf56Q8N910 161 aa7.91□□□□□ -1.14
TRIM40-205ENST00000307859 TRBV20-1A0A075B6N2 111 aa7.9□□□□□ -1.14
TRIM40-205ENST00000307859 IGKV2D-24A0A075B6R9 120 aa7.9□□□□□ -1.14
TRIM40-205ENST00000307859 PSMB2P49721 201 aa7.9□□□□□ -1.14
TRIM40-205ENST00000307859 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
TRIM40-205ENST00000307859 UNQ6190/PRO20217Q6UXQ8 127 aa7.9□□□□□ -1.14
TRIM40-205ENST00000307859 APLNQ9ULZ1 77 aa7.9□□□□□ -1.14
TRIM40-205ENST00000307859 LYSTQ99698 3801 aa7.9□□□□□ -1.15
TRIM40-205ENST00000307859 H3BMG7 143 aa7.89□□□□□ -1.15
TRIM40-205ENST00000307859 TRIAP1O43715 76 aa7.89□□□□□ -1.15
TRIM40-205ENST00000307859 LINC00526Q96FQ7 95 aa7.89□□□□□ -1.15
TRIM40-205ENST00000307859 IGKV2-28A0A075B6P5 120 aa7.89□□□□□ -1.15
TRIM40-205ENST00000307859 TCL1BO95988 128 aa7.89□□□□□ -1.15
TRIM40-205ENST00000307859 IGKV2D-28P01615 120 aa7.89□□□□□ -1.15
TRIM40-205ENST00000307859 C9orf116Q5BN46 136 aaPredicted RBP7.89□□□□□ -1.15
TRIM40-205ENST00000307859 DNAH7Q8WXX0 4024 aa7.88□□□□□ -1.15
TRIM40-205ENST00000307859 TRAV13-2A0A0B4J235 113 aa7.88□□□□□ -1.15
TRIM40-205ENST00000307859 SCGB1C2P0DMR2 95 aa7.88□□□□□ -1.15
TRIM40-205ENST00000307859 C2orf48Q96LS8 159 aa7.88□□□□□ -1.15
TRIM40-205ENST00000307859 Q9HAA7 133 aa7.88□□□□□ -1.15
TRIM40-205ENST00000307859 NUPR2A6NF83 97 aa7.87□□□□□ -1.15
TRIM40-205ENST00000307859 F8WDY8 70 aa7.87□□□□□ -1.15
TRIM40-205ENST00000307859 ZNF561-AS1K7EIQ3 104 aa7.87□□□□□ -1.15
TRIM40-205ENST00000307859 HIGD2BQ4VC39 106 aa7.87□□□□□ -1.15
TRIM40-205ENST00000307859 LINC00337Q8N6G1 96 aa7.87□□□□□ -1.15
TRIM40-205ENST00000307859 C6orf48Q9UBA6 75 aa7.87□□□□□ -1.15
TRIM40-205ENST00000307859 PRO0461Q9UI25 63 aa7.87□□□□□ -1.15
TRIM40-205ENST00000307859 F8W1H4 67 aa7.86□□□□□ -1.15
TRIM40-205ENST00000307859 NDUFC2O95298 119 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms