RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 LINC01561Q8N1V8 128 aa11.27□□□□□ -0.61
TVP23B-201ENST00000307767 CLEC2BQ92478 149 aa11.27□□□□□ -0.61
TVP23B-201ENST00000307767 IBA57-AS1B1ANH7 110 aa11.26□□□□□ -0.61
TVP23B-201ENST00000307767 ANKRD29Q8N6D5 301 aa11.26□□□□□ -0.61
TVP23B-201ENST00000307767 REG3AQ06141 175 aa11.26□□□□□ -0.61
TVP23B-201ENST00000307767 LELP1Q5T871 98 aa11.26□□□□□ -0.61
TVP23B-201ENST00000307767 LST1O00453 97 aa11.25□□□□□ -0.61
TVP23B-201ENST00000307767 CCL18P55774 89 aa11.25□□□□□ -0.61
TVP23B-201ENST00000307767 CD164L2Q6UWJ8 174 aa11.25□□□□□ -0.61
TVP23B-201ENST00000307767 CHCHD10Q8WYQ3 142 aaPredicted RBP11.25□□□□□ -0.61
TVP23B-201ENST00000307767 ANGP03950 147 aaKnown RBP11.24□□□□□ -0.61
TVP23B-201ENST00000307767 Q8IZM0 81 aa11.24□□□□□ -0.61
TVP23B-201ENST00000307767 C3orf56Q8N813 242 aa11.24□□□□□ -0.61
TVP23B-201ENST00000307767 COPS9Q8WXC6 57 aa11.24□□□□□ -0.61
TVP23B-201ENST00000307767 IGLV10-54A0A075B6I4 117 aa11.24□□□□□ -0.61
TVP23B-201ENST00000307767 C2orf82Q6UX34 121 aa11.24□□□□□ -0.61
TVP23B-201ENST00000307767 LINC00337Q8N6G1 96 aa11.24□□□□□ -0.61
TVP23B-201ENST00000307767 PCP4P48539 62 aa11.23□□□□□ -0.61
TVP23B-201ENST00000307767 LINC00158P58513 81 aa11.23□□□□□ -0.61
TVP23B-201ENST00000307767 C6orf226Q5I0X4 101 aa11.23□□□□□ -0.61
TVP23B-201ENST00000307767 TRBV10-2A0A0K0K1G8 114 aa11.23□□□□□ -0.61
TVP23B-201ENST00000307767 LYPD5Q6UWN5 251 aa11.23□□□□□ -0.61
TVP23B-201ENST00000307767 PPDPFLQ8WWR9 84 aa11.23□□□□□ -0.61
TVP23B-201ENST00000307767 C11orf68Q9H3H3 251 aaKnown RBP11.23□□□□□ -0.61
TVP23B-201ENST00000307767 PFN2P35080 140 aa11.22□□□□□ -0.61
TVP23B-201ENST00000307767 SPATA25Q9BR10 227 aa11.22□□□□□ -0.61
TVP23B-201ENST00000307767 J3QR89 54 aa11.21□□□□□ -0.61
TVP23B-201ENST00000307767 COX6CP09669 75 aa11.21□□□□□ -0.61
TVP23B-201ENST00000307767 SND1-IT1Q9HBX3 110 aa11.21□□□□□ -0.61
TVP23B-201ENST00000307767 PRR34Q9NV39 138 aa11.21□□□□□ -0.61
TVP23B-201ENST00000307767 TENM3Q9P273 2699 aa11.21□□□□□ -0.62
TVP23B-201ENST00000307767 GAGE12HA6NDE8 117 aa11.21□□□□□ -0.62
TVP23B-201ENST00000307767 COX7A2LO14548 114 aa11.2□□□□□ -0.62
TVP23B-201ENST00000307767 ENHOQ6UWT2 76 aa11.2□□□□□ -0.62
TVP23B-201ENST00000307767 Q6ZTC4 211 aa11.2□□□□□ -0.62
TVP23B-201ENST00000307767 CDIP1Q9H305 208 aa11.19□□□□□ -0.62
TVP23B-201ENST00000307767 MAST4O15021 2626 aa11.18□□□□□ -0.62
TVP23B-201ENST00000307767 H3BNG1 76 aa11.18□□□□□ -0.62
TVP23B-201ENST00000307767 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
TVP23B-201ENST00000307767 NTN5Q8WTR8 489 aaPredicted RBP11.17□□□□□ -0.62
TVP23B-201ENST00000307767 FAM218AQ96MZ4 157 aa11.17□□□□□ -0.62
TVP23B-201ENST00000307767 KLK12Q9UKR0 248 aa11.17□□□□□ -0.62
TVP23B-201ENST00000307767 RPL28P46779 137 aaKnown RBP11.16□□□□□ -0.62
TVP23B-201ENST00000307767 TRAV13-2A0A0B4J235 113 aa11.16□□□□□ -0.62
TVP23B-201ENST00000307767 C21orf62-AS1Q17RA5 79 aa11.15□□□□□ -0.62
TVP23B-201ENST00000307767 H3BT86 120 aa11.15□□□□□ -0.63
TVP23B-201ENST00000307767 A0A0J9YWU9 116 aa11.14□□□□□ -0.63
TVP23B-201ENST00000307767 TEX49A0A1B0GTD5 131 aa11.14□□□□□ -0.63
TVP23B-201ENST00000307767 WFDC10BQ8IUB3 73 aa11.14□□□□□ -0.63
TVP23B-201ENST00000307767 KLK5Q9Y337 293 aaPredicted RBP11.14□□□□□ -0.63
TVP23B-201ENST00000307767 CRPP02741 224 aa11.13□□□□□ -0.63
TVP23B-201ENST00000307767 C9orf116Q5BN46 136 aaPredicted RBP11.13□□□□□ -0.63
TVP23B-201ENST00000307767 CKS1BP61024 79 aa11.13□□□□□ -0.63
TVP23B-201ENST00000307767 C10orf25Q5T742 122 aa11.13□□□□□ -0.63
TVP23B-201ENST00000307767 C6orf223Q8N319 242 aa11.13□□□□□ -0.63
TVP23B-201ENST00000307767 SMIM11BQ8TCY0 68 aa11.13□□□□□ -0.63
TVP23B-201ENST00000307767 MALP21145 153 aa11.12□□□□□ -0.63
TVP23B-201ENST00000307767 NANOS2P60321 138 aaKnown RBP11.12□□□□□ -0.63
TVP23B-201ENST00000307767 CXCL5P42830 114 aa11.12□□□□□ -0.63
TVP23B-201ENST00000307767 Q8NDZ9 215 aa11.12□□□□□ -0.63
TVP23B-201ENST00000307767 C22orf24Q9Y442 160 aa11.12□□□□□ -0.63
TVP23B-201ENST00000307767 COL6A5A8TX70 2615 aa11.11□□□□□ -0.63
TVP23B-201ENST00000307767 TRAV8-4A0A0B4J246 113 aa11.11□□□□□ -0.63
TVP23B-201ENST00000307767 ESRGQ1W209 222 aa11.11□□□□□ -0.63
TVP23B-201ENST00000307767 KRTAP26-1Q6PEX3 210 aa11.11□□□□□ -0.63
TVP23B-201ENST00000307767 LINC00526Q96FQ7 95 aa11.11□□□□□ -0.63
TVP23B-201ENST00000307767 SIGMAR1Q99720 223 aa11.11□□□□□ -0.63
TVP23B-201ENST00000307767 CFAP161Q6P656 301 aa11.1□□□□□ -0.63
TVP23B-201ENST00000307767 NOTCH1P46531 2555 aa11.1□□□□□ -0.63
TVP23B-201ENST00000307767 TRACP01848 142 aa11.1□□□□□ -0.63
TVP23B-201ENST00000307767 PRR3P79522 188 aaKnown RBP11.1□□□□□ -0.63
TVP23B-201ENST00000307767 COX17Q14061 63 aa11.1□□□□□ -0.63
TVP23B-201ENST00000307767 UNQ6190/PRO20217Q6UXQ8 127 aa11.1□□□□□ -0.63
TVP23B-201ENST00000307767 PRB2P02812 416 aaPredicted RBP11.08□□□□□ -0.63
TVP23B-201ENST00000307767 HUWE1Q7Z6Z7 4374 aaKnown RBP11.08□□□□□ -0.64
TVP23B-201ENST00000307767 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
TVP23B-201ENST00000307767 UBE2WQ96B02 151 aa11.08□□□□□ -0.64
TVP23B-201ENST00000307767 DEFB121Q5J5C9 76 aa11.07□□□□□ -0.64
TVP23B-201ENST00000307767 C11orf45Q8TAV5 145 aa11.06□□□□□ -0.64
TVP23B-201ENST00000307767 DEFB131BA0A096LNP1 70 aa11.05□□□□□ -0.64
TVP23B-201ENST00000307767 XGP55808 180 aa11.05□□□□□ -0.64
TVP23B-201ENST00000307767 A0A087WYN8 130 aa11.05□□□□□ -0.64
TVP23B-201ENST00000307767 NDUFC2O95298 119 aa11.05□□□□□ -0.64
TVP23B-201ENST00000307767 K7EIL1 84 aa11.04□□□□□ -0.64
TVP23B-201ENST00000307767 MT-ATP8P03928 68 aa11.04□□□□□ -0.64
TVP23B-201ENST00000307767 NBEAL1Q6ZS30 2694 aa11.04□□□□□ -0.64
TVP23B-201ENST00000307767 Q9HAA7 133 aa11.03□□□□□ -0.64
TVP23B-201ENST00000307767 OR13C6PQ8NH95 151 aa11.02□□□□□ -0.64
TVP23B-201ENST00000307767 TM2D3Q9BRN9 247 aa11.02□□□□□ -0.64
TVP23B-201ENST00000307767 GVQW2A0A096LPI5 108 aaPredicted RBP11.02□□□□□ -0.65
TVP23B-201ENST00000307767 BAALC-AS2P0C853 105 aa11.02□□□□□ -0.65
TVP23B-201ENST00000307767 C6orf48Q9UBA6 75 aa11.02□□□□□ -0.65
TVP23B-201ENST00000307767 H0YGX0 51 aa11□□□□□ -0.65
TVP23B-201ENST00000307767 LINC01556Q5JQF7 62 aa10.99□□□□□ -0.65
TVP23B-201ENST00000307767 C15orf56Q8N910 161 aa10.99□□□□□ -0.65
TVP23B-201ENST00000307767 SCGB1A1P11684 91 aa10.97□□□□□ -0.65
TVP23B-201ENST00000307767 MUC7Q8TAX7 377 aa10.97□□□□□ -0.65
TVP23B-201ENST00000307767 DNAH1Q9P2D7 4330 aa10.97□□□□□ -0.65
TVP23B-201ENST00000307767 NCR3O14931 201 aa10.96□□□□□ -0.65
TVP23B-201ENST00000307767 HIGD2BQ4VC39 106 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms