RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SPANXDQ9BXN6 97 aa10.37□□□□□ -0.75
PTPN9-201ENST00000306726 SPANXCQ9NY87 97 aa10.37□□□□□ -0.75
PTPN9-201ENST00000306726 Q8N3U1 123 aa10.37□□□□□ -0.75
PTPN9-201ENST00000306726 MGAM2Q2M2H8 2515 aa10.37□□□□□ -0.75
PTPN9-201ENST00000306726 LINC00482Q8N8I6 264 aa10.36□□□□□ -0.75
PTPN9-201ENST00000306726 SCXQ7RTU7 201 aa10.36□□□□□ -0.75
PTPN9-201ENST00000306726 RNF152Q8N8N0 203 aa10.35□□□□□ -0.75
PTPN9-201ENST00000306726 CCL18P55774 89 aa10.35□□□□□ -0.75
PTPN9-201ENST00000306726 LINC00269Q8N2A0 174 aa10.35□□□□□ -0.75
PTPN9-201ENST00000306726 CDC42SE2Q9NRR3 84 aa10.35□□□□□ -0.75
PTPN9-201ENST00000306726 COPS9Q8WXC6 57 aa10.34□□□□□ -0.75
PTPN9-201ENST00000306726 C11orf72Q8NBR9 251 aa10.33□□□□□ -0.75
PTPN9-201ENST00000306726 TRAV13-2A0A0B4J235 113 aa10.33□□□□□ -0.76
PTPN9-201ENST00000306726 CXCL5P42830 114 aa10.33□□□□□ -0.76
PTPN9-201ENST00000306726 MAST4O15021 2626 aa10.33□□□□□ -0.76
PTPN9-201ENST00000306726 INAFM2P0DMQ5 153 aa10.32□□□□□ -0.76
PTPN9-201ENST00000306726 TMEM126AQ9H061 195 aa10.32□□□□□ -0.76
PTPN9-201ENST00000306726 DSCR8Q96T75 97 aa10.31□□□□□ -0.76
PTPN9-201ENST00000306726 LINC00643Q86TS7 51 aa10.31□□□□□ -0.76
PTPN9-201ENST00000306726 F5H768 121 aa10.3□□□□□ -0.76
PTPN9-201ENST00000306726 DEFB135Q30KP9 77 aa10.3□□□□□ -0.76
PTPN9-201ENST00000306726 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
PTPN9-201ENST00000306726 PRB2P02812 416 aaPredicted RBP10.3□□□□□ -0.76
PTPN9-201ENST00000306726 LINC00846Q9NV44 126 aa10.3□□□□□ -0.76
PTPN9-201ENST00000306726 DNAJC30Q96LL9 226 aa10.3□□□□□ -0.76
PTPN9-201ENST00000306726 CYSRT1A8MQ03 144 aa10.29□□□□□ -0.76
PTPN9-201ENST00000306726 COL6A5A8TX70 2615 aa10.29□□□□□ -0.76
PTPN9-201ENST00000306726 M0QXV9 152 aa10.29□□□□□ -0.76
PTPN9-201ENST00000306726 LINC01006Q8NI28 216 aa10.29□□□□□ -0.76
PTPN9-201ENST00000306726 SS18Q15532 418 aa10.28□□□□□ -0.76
PTPN9-201ENST00000306726 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
PTPN9-201ENST00000306726 VWFP04275 2813 aa10.28□□□□□ -0.76
PTPN9-201ENST00000306726 NBPF19A0A087WUL8 3843 aa10.26□□□□□ -0.77
PTPN9-201ENST00000306726 RPL18AQ02543 176 aaKnown RBP10.26□□□□□ -0.77
PTPN9-201ENST00000306726 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
PTPN9-201ENST00000306726 C4orf3Q8WVX3 66 aa10.26□□□□□ -0.77
PTPN9-201ENST00000306726 FAM19A1Q7Z5A9 133 aa10.26□□□□□ -0.77
PTPN9-201ENST00000306726 C20orf197Q8N268 126 aa10.26□□□□□ -0.77
PTPN9-201ENST00000306726 ORMDL1Q9P0S3 153 aa10.26□□□□□ -0.77
PTPN9-201ENST00000306726 C6orf99Q4VX62 202 aa10.25□□□□□ -0.77
PTPN9-201ENST00000306726 TRACP01848 142 aa10.25□□□□□ -0.77
PTPN9-201ENST00000306726 C3orf22Q8N5N4 141 aa10.25□□□□□ -0.77
PTPN9-201ENST00000306726 IGKV2-28A0A075B6P5 120 aa10.24□□□□□ -0.77
PTPN9-201ENST00000306726 TRBV6-8A0A0A6YYG3 113 aa10.24□□□□□ -0.77
PTPN9-201ENST00000306726 IGKV2D-28P01615 120 aa10.24□□□□□ -0.77
PTPN9-201ENST00000306726 C6orf223Q8N319 242 aa10.24□□□□□ -0.77
PTPN9-201ENST00000306726 OTOGQ6ZRI0 2925 aa10.24□□□□□ -0.77
PTPN9-201ENST00000306726 DEFB105AQ8NG35 78 aa10.23□□□□□ -0.77
PTPN9-201ENST00000306726 KLK12Q9UKR0 248 aa10.23□□□□□ -0.77
PTPN9-201ENST00000306726 AKAP9Q99996 3911 aa10.23□□□□□ -0.77
PTPN9-201ENST00000306726 DAD1P61803 113 aa10.23□□□□□ -0.77
PTPN9-201ENST00000306726 STAB1Q9NY15 2570 aa10.23□□□□□ -0.77
PTPN9-201ENST00000306726 IGHV4-28A0A0C4DH34 117 aa10.22□□□□□ -0.77
PTPN9-201ENST00000306726 TRAV25A0A0B4J276 109 aa10.22□□□□□ -0.77
PTPN9-201ENST00000306726 HIGD2BQ4VC39 106 aa10.22□□□□□ -0.77
PTPN9-201ENST00000306726 TRBV10-1A0A0K0K1A3 114 aa10.21□□□□□ -0.77
PTPN9-201ENST00000306726 GHRHP01286 108 aa10.21□□□□□ -0.77
PTPN9-201ENST00000306726 IGLV5-39A0A0G2JS06 123 aa10.21□□□□□ -0.78
PTPN9-201ENST00000306726 SNURFQ9Y675 71 aa10.21□□□□□ -0.78
PTPN9-201ENST00000306726 LINC00959A0A1B0GUT2 108 aa10.21□□□□□ -0.78
PTPN9-201ENST00000306726 ACYP1P07311 99 aa10.21□□□□□ -0.78
PTPN9-201ENST00000306726 FAM222AQ5U5X8 452 aa10.21□□□□□ -0.78
PTPN9-201ENST00000306726 USP17L23D6RBM5 183 aa10.2□□□□□ -0.78
PTPN9-201ENST00000306726 UQCRQO14949 82 aa10.19□□□□□ -0.78
PTPN9-201ENST00000306726 TIMM17BO60830 172 aa10.19□□□□□ -0.78
PTPN9-201ENST00000306726 C16orf74Q96GX8 76 aa10.18□□□□□ -0.78
PTPN9-201ENST00000306726 CYSTM1Q9H1C7 97 aa10.18□□□□□ -0.78
PTPN9-201ENST00000306726 BEAN1Q3B7T3 259 aa10.18□□□□□ -0.78
PTPN9-201ENST00000306726 UNQ6190/PRO20217Q6UXQ8 127 aa10.18□□□□□ -0.78
PTPN9-201ENST00000306726 Q6Q795 121 aa10.17□□□□□ -0.78
PTPN9-201ENST00000306726 UBL5Q9BZL1 73 aa10.17□□□□□ -0.78
PTPN9-201ENST00000306726 CHCHD10Q8WYQ3 142 aaPredicted RBP10.17□□□□□ -0.78
PTPN9-201ENST00000306726 H0YGX0 51 aa10.16□□□□□ -0.78
PTPN9-201ENST00000306726 ATOX1O00244 68 aa10.15□□□□□ -0.78
PTPN9-201ENST00000306726 COX7CP15954 63 aa10.15□□□□□ -0.78
PTPN9-201ENST00000306726 FHL2Q14192 279 aa10.15□□□□□ -0.78
PTPN9-201ENST00000306726 FAM19A5Q7Z5A7 132 aaPredicted RBP10.15□□□□□ -0.78
PTPN9-201ENST00000306726 RPL28P46779 137 aaKnown RBP10.14□□□□□ -0.79
PTPN9-201ENST00000306726 IGHV3OR16-9A0A0B4J2B5 98 aa10.14□□□□□ -0.79
PTPN9-201ENST00000306726 FAM240AA0A1B0GVK7 77 aa10.14□□□□□ -0.79
PTPN9-201ENST00000306726 Q6ZQY7 126 aa10.14□□□□□ -0.79
PTPN9-201ENST00000306726 KRTAP24-1Q3LI83 254 aa10.13□□□□□ -0.79
PTPN9-201ENST00000306726 TRBV7-7A0A0K0K1E9 115 aa10.13□□□□□ -0.79
PTPN9-201ENST00000306726 SPAG11BQ08648 103 aa10.13□□□□□ -0.79
PTPN9-201ENST00000306726 NSD1Q96L73 2696 aaPredicted RBP10.13□□□□□ -0.79
PTPN9-201ENST00000306726 ANK3Q12955 4377 aaKnown RBP10.13□□□□□ -0.79
PTPN9-201ENST00000306726 REG3AQ06141 175 aa10.13□□□□□ -0.79
PTPN9-201ENST00000306726 HRCT1Q6UXD1 115 aa10.13□□□□□ -0.79
PTPN9-201ENST00000306726 UPK3BQ9BT76 320 aa10.13□□□□□ -0.79
PTPN9-201ENST00000306726 Q8N9L7 120 aa10.12□□□□□ -0.79
PTPN9-201ENST00000306726 FAM110AQ9BQ89 295 aa10.12□□□□□ -0.79
PTPN9-201ENST00000306726 IGLV5-45A0A087WSX0 123 aa10.12□□□□□ -0.79
PTPN9-201ENST00000306726 C10orf25Q5T742 122 aa10.12□□□□□ -0.79
PTPN9-201ENST00000306726 TENM1Q9UKZ4 2725 aa10.11□□□□□ -0.79
PTPN9-201ENST00000306726 IBA57-AS1B1ANH7 110 aa10.11□□□□□ -0.79
PTPN9-201ENST00000306726 PKD1L1Q8TDX9 2849 aa10.11□□□□□ -0.79
PTPN9-201ENST00000306726 J3KT08 172 aa10.1□□□□□ -0.79
PTPN9-201ENST00000306726 TRBV6-4A0A1B0GX49 114 aa10.09□□□□□ -0.79
PTPN9-201ENST00000306726 GIG44P09565 113 aaPredicted RBP10.09□□□□□ -0.79
PTPN9-201ENST00000306726 SVIPQ8NHG7 77 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms