RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 FOXI1Q12951 378 aa17.36■□□□□ 0.37
SDCCAG3-201ENST00000298537 LYSTQ99698 3801 aa17.35■□□□□ 0.37
SDCCAG3-201ENST00000298537 UBE2WQ96B02 151 aa17.35■□□□□ 0.37
SDCCAG3-201ENST00000298537 GAGE12HA6NDE8 117 aa17.34■□□□□ 0.37
SDCCAG3-201ENST00000298537 LINC00308Q8TCZ7 52 aa17.34■□□□□ 0.37
SDCCAG3-201ENST00000298537 TRAV10A0A0B4J240 114 aa17.33■□□□□ 0.37
SDCCAG3-201ENST00000298537 H7C2G1 150 aa17.33■□□□□ 0.37
SDCCAG3-201ENST00000298537 COX7A2LO14548 114 aa17.33■□□□□ 0.37
SDCCAG3-201ENST00000298537 CIRBPQ14011 172 aaKnown RBP17.33■□□□□ 0.37
SDCCAG3-201ENST00000298537 PRO1854Q9UHT4 67 aa17.33■□□□□ 0.36
SDCCAG3-201ENST00000298537 HERV-K104P63124 156 aa17.32■□□□□ 0.36
SDCCAG3-201ENST00000298537 C6orf226Q5I0X4 101 aa17.32■□□□□ 0.36
SDCCAG3-201ENST00000298537 LINC00526Q96FQ7 95 aa17.3■□□□□ 0.36
SDCCAG3-201ENST00000298537 KIAA0087Q14695 138 aa17.3■□□□□ 0.36
SDCCAG3-201ENST00000298537 PRKDCP78527 4128 aaKnown RBP17.29■□□□□ 0.36
SDCCAG3-201ENST00000298537 PFN2P35080 140 aa17.29■□□□□ 0.36
SDCCAG3-201ENST00000298537 A0A0B4J2C4 111 aa17.29■□□□□ 0.36
SDCCAG3-201ENST00000298537 MALP21145 153 aa17.29■□□□□ 0.36
SDCCAG3-201ENST00000298537 MIR7-3HGQ8N6C7 128 aa17.29■□□□□ 0.36
SDCCAG3-201ENST00000298537 Q8IZM0 81 aa17.28■□□□□ 0.36
SDCCAG3-201ENST00000298537 GTF2H5Q6ZYL4 71 aa17.27■□□□□ 0.36
SDCCAG3-201ENST00000298537 LOC107984156A0A0G2JMH3 177 aa17.27■□□□□ 0.35
SDCCAG3-201ENST00000298537 ARL17AQ8IVW1 177 aa17.27■□□□□ 0.35
SDCCAG3-201ENST00000298537 SVIPQ8NHG7 77 aa17.27■□□□□ 0.35
SDCCAG3-201ENST00000298537 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.26■□□□□ 0.35
SDCCAG3-201ENST00000298537 CRPP02741 224 aa17.26■□□□□ 0.35
SDCCAG3-201ENST00000298537 IFITM1P13164 125 aa17.26■□□□□ 0.35
SDCCAG3-201ENST00000298537 LINC00158P58513 81 aa17.26■□□□□ 0.35
SDCCAG3-201ENST00000298537 C6orf223Q8N319 242 aa17.26■□□□□ 0.35
SDCCAG3-201ENST00000298537 LINC00588Q9Y4M8 146 aa17.24■□□□□ 0.35
SDCCAG3-201ENST00000298537 CSMD3Q7Z407 3707 aa17.24■□□□□ 0.35
SDCCAG3-201ENST00000298537 H3BMG7 143 aa17.24■□□□□ 0.35
SDCCAG3-201ENST00000298537 LINC01561Q8N1V8 128 aa17.24■□□□□ 0.35
SDCCAG3-201ENST00000298537 MTURNQ8N3F0 131 aa17.24■□□□□ 0.35
SDCCAG3-201ENST00000298537 C9orf116Q5BN46 136 aaPredicted RBP17.22■□□□□ 0.35
SDCCAG3-201ENST00000298537 ERG28Q9UKR5 140 aa17.22■□□□□ 0.35
SDCCAG3-201ENST00000298537 B9D2Q9BPU9 175 aa17.21■□□□□ 0.35
SDCCAG3-201ENST00000298537 CKS1BP61024 79 aa17.2■□□□□ 0.34
SDCCAG3-201ENST00000298537 KRTAP26-1Q6PEX3 210 aa17.2■□□□□ 0.34
SDCCAG3-201ENST00000298537 C10orf25Q5T742 122 aa17.2■□□□□ 0.34
SDCCAG3-201ENST00000298537 MEGF8Q7Z7M0 2845 aa17.19■□□□□ 0.34
SDCCAG3-201ENST00000298537 IBA57-AS1B1ANH7 110 aa17.19■□□□□ 0.34
SDCCAG3-201ENST00000298537 Q1RN00 199 aa17.19■□□□□ 0.34
SDCCAG3-201ENST00000298537 LINC01556Q5JQF7 62 aa17.19■□□□□ 0.34
SDCCAG3-201ENST00000298537 C15orf53Q8NAA6 179 aa17.19■□□□□ 0.34
SDCCAG3-201ENST00000298537 DNAH1Q9P2D7 4330 aa17.19■□□□□ 0.34
SDCCAG3-201ENST00000298537 CFAP161Q6P656 301 aa17.18■□□□□ 0.34
SDCCAG3-201ENST00000298537 SPAG11BQ08648 103 aa17.17■□□□□ 0.34
SDCCAG3-201ENST00000298537 RPL13AP40429 203 aaKnown RBP17.16■□□□□ 0.34
SDCCAG3-201ENST00000298537 PSMB2P49721 201 aa17.16■□□□□ 0.34
SDCCAG3-201ENST00000298537 CCL18P55774 89 aa17.16■□□□□ 0.34
SDCCAG3-201ENST00000298537 UNQ6190/PRO20217Q6UXQ8 127 aa17.16■□□□□ 0.34
SDCCAG3-201ENST00000298537 TRAV8-4A0A0B4J246 113 aa17.15■□□□□ 0.34
SDCCAG3-201ENST00000298537 TCL1BO95988 128 aa17.15■□□□□ 0.34
SDCCAG3-201ENST00000298537 KLK5Q9Y337 293 aaPredicted RBP17.15■□□□□ 0.34
SDCCAG3-201ENST00000298537 Q9HAA7 133 aa17.14■□□□□ 0.33
SDCCAG3-201ENST00000298537 TRIAP1O43715 76 aa17.14■□□□□ 0.33
SDCCAG3-201ENST00000298537 SCGB1C2P0DMR2 95 aa17.14■□□□□ 0.33
SDCCAG3-201ENST00000298537 DNAH10OSP0CZ25 163 aa17.13■□□□□ 0.33
SDCCAG3-201ENST00000298537 DNAH7Q8WXX0 4024 aa17.13■□□□□ 0.33
SDCCAG3-201ENST00000298537 DYNC2H1Q8NCM8 4307 aaKnown RBP17.12■□□□□ 0.33
SDCCAG3-201ENST00000298537 HIGD2BQ4VC39 106 aa17.12■□□□□ 0.33
SDCCAG3-201ENST00000298537 SND1-IT1Q9HBX3 110 aa17.12■□□□□ 0.33
SDCCAG3-201ENST00000298537 PLECQ15149 4684 aaKnown RBP17.11■□□□□ 0.33
SDCCAG3-201ENST00000298537 IGKV2-28A0A075B6P5 120 aa17.11■□□□□ 0.33
SDCCAG3-201ENST00000298537 IGKV2D-28P01615 120 aa17.11■□□□□ 0.33
SDCCAG3-201ENST00000298537 IGKV2D-24A0A075B6R9 120 aa17.1■□□□□ 0.33
SDCCAG3-201ENST00000298537 TENM2Q9NT68 2774 aa17.1■□□□□ 0.33
SDCCAG3-201ENST00000298537 WFDC2Q14508 124 aa17.08■□□□□ 0.33
SDCCAG3-201ENST00000298537 LINC00337Q8N6G1 96 aa17.08■□□□□ 0.33
SDCCAG3-201ENST00000298537 CXCL5P42830 114 aa17.08■□□□□ 0.32
SDCCAG3-201ENST00000298537 C1orf43Q9BWL3 253 aa17.08■□□□□ 0.32
SDCCAG3-201ENST00000298537 PRO0461Q9UI25 63 aa17.08■□□□□ 0.32
SDCCAG3-201ENST00000298537 COPS9Q8WXC6 57 aa17.07■□□□□ 0.32
SDCCAG3-201ENST00000298537 C15orf56Q8N910 161 aa17.07■□□□□ 0.32
SDCCAG3-201ENST00000298537 TRBV30A0A0K0K1B3 111 aa17.05■□□□□ 0.32
SDCCAG3-201ENST00000298537 DNAH10Q8IVF4 4471 aa17.05■□□□□ 0.32
SDCCAG3-201ENST00000298537 PRR3P79522 188 aaKnown RBP17.04■□□□□ 0.32
SDCCAG3-201ENST00000298537 NTN5Q8WTR8 489 aaPredicted RBP17.04■□□□□ 0.32
SDCCAG3-201ENST00000298537 CASC10Q5T4H9 136 aa17.03■□□□□ 0.32
SDCCAG3-201ENST00000298537 Q8NDZ9 215 aa17.03■□□□□ 0.32
SDCCAG3-201ENST00000298537 STARD9Q9P2P6 4700 aa17.03■□□□□ 0.32
SDCCAG3-201ENST00000298537 C6orf48Q9UBA6 75 aa17.03■□□□□ 0.32
SDCCAG3-201ENST00000298537 SMCPP49901 116 aaPredicted RBP17.02■□□□□ 0.32
SDCCAG3-201ENST00000298537 CLEC2BQ92478 149 aa17.02■□□□□ 0.32
SDCCAG3-201ENST00000298537 PPDPFQ9H3Y8 114 aa17.02■□□□□ 0.31
SDCCAG3-201ENST00000298537 LYRM7Q5U5X0 104 aa17■□□□□ 0.31
SDCCAG3-201ENST00000298537 SCGB1A1P11684 91 aa16.99■□□□□ 0.31
SDCCAG3-201ENST00000298537 APLNQ9ULZ1 77 aa16.99■□□□□ 0.31
SDCCAG3-201ENST00000298537 ZNF561-AS1K7EIQ3 104 aa16.98■□□□□ 0.31
SDCCAG3-201ENST00000298537 COX17Q14061 63 aa16.98■□□□□ 0.31
SDCCAG3-201ENST00000298537 TRBV20-1A0A075B6N2 111 aa16.98■□□□□ 0.31
SDCCAG3-201ENST00000298537 F8W1H4 67 aa16.98■□□□□ 0.31
SDCCAG3-201ENST00000298537 UPK3BQ9BT76 320 aa16.97■□□□□ 0.31
SDCCAG3-201ENST00000298537 KRTAP1-5Q9BYS1 174 aa16.97■□□□□ 0.31
SDCCAG3-201ENST00000298537 Q6ZRU5 148 aa16.96■□□□□ 0.3
SDCCAG3-201ENST00000298537 CAMK2N2Q96S95 79 aa16.96■□□□□ 0.3
SDCCAG3-201ENST00000298537 ETDBQ3ZM63 59 aa16.95■□□□□ 0.3
SDCCAG3-201ENST00000298537 TRAV13-2A0A0B4J235 113 aa16.93■□□□□ 0.3
SDCCAG3-201ENST00000298537 NHLRC4P0CG21 123 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms