RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 DEFB131BA0A096LNP1 70 aa14.61□□□□□ -0.07
SOX17-201ENST00000297316 PPDPFLQ8WWR9 84 aa14.61□□□□□ -0.07
SOX17-201ENST00000297316 ERG28Q9UKR5 140 aa14.61□□□□□ -0.07
SOX17-201ENST00000297316 DNHD1Q96M86 4753 aa14.61□□□□□ -0.07
SOX17-201ENST00000297316 DNAH9Q9NYC9 4486 aa14.61□□□□□ -0.07
SOX17-201ENST00000297316 LYPD5Q6UWN5 251 aa14.61□□□□□ -0.07
SOX17-201ENST00000297316 XCL1P47992 114 aa14.6□□□□□ -0.07
SOX17-201ENST00000297316 CDIP1Q9H305 208 aa14.6□□□□□ -0.07
SOX17-201ENST00000297316 A0A087WZ39 114 aa14.6□□□□□ -0.07
SOX17-201ENST00000297316 LINC00269Q8N2A0 174 aa14.6□□□□□ -0.07
SOX17-201ENST00000297316 COX7B2Q8TF08 81 aa14.6□□□□□ -0.07
SOX17-201ENST00000297316 TOMM7Q9P0U1 55 aa14.6□□□□□ -0.07
SOX17-201ENST00000297316 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.59□□□□□ -0.07
SOX17-201ENST00000297316 LELP1Q5T871 98 aa14.59□□□□□ -0.07
SOX17-201ENST00000297316 ANKRD29Q8N6D5 301 aa14.58□□□□□ -0.08
SOX17-201ENST00000297316 Q1RN00 199 aa14.57□□□□□ -0.08
SOX17-201ENST00000297316 ANGP03950 147 aaKnown RBP14.57□□□□□ -0.08
SOX17-201ENST00000297316 SS18Q15532 418 aa14.57□□□□□ -0.08
SOX17-201ENST00000297316 C9JAW5 83 aa14.56□□□□□ -0.08
SOX17-201ENST00000297316 H3BNG1 76 aa14.56□□□□□ -0.08
SOX17-201ENST00000297316 MEIG1Q5JSS6 88 aa14.56□□□□□ -0.08
SOX17-201ENST00000297316 SOSTDC1Q6X4U4 206 aa14.56□□□□□ -0.08
SOX17-201ENST00000297316 SLC25A20O43772 301 aa14.55□□□□□ -0.08
SOX17-201ENST00000297316 CIRBPQ14011 172 aaKnown RBP14.55□□□□□ -0.08
SOX17-201ENST00000297316 LINC00308Q8TCZ7 52 aa14.55□□□□□ -0.08
SOX17-201ENST00000297316 STAB2Q8WWQ8 2551 aa14.54□□□□□ -0.08
SOX17-201ENST00000297316 IFITM1P13164 125 aa14.54□□□□□ -0.08
SOX17-201ENST00000297316 HERV-K104P63124 156 aa14.54□□□□□ -0.08
SOX17-201ENST00000297316 IGLV10-54A0A075B6I4 117 aa14.53□□□□□ -0.08
SOX17-201ENST00000297316 REG3AQ06141 175 aa14.53□□□□□ -0.08
SOX17-201ENST00000297316 WFDC10BQ8IUB3 73 aa14.53□□□□□ -0.08
SOX17-201ENST00000297316 ESRGQ1W209 222 aa14.52□□□□□ -0.08
SOX17-201ENST00000297316 MT-ATP8P03928 68 aa14.51□□□□□ -0.09
SOX17-201ENST00000297316 TRIAP1O43715 76 aa14.5□□□□□ -0.09
SOX17-201ENST00000297316 XGP55808 180 aa14.5□□□□□ -0.09
SOX17-201ENST00000297316 CHCHD10Q8WYQ3 142 aaPredicted RBP14.5□□□□□ -0.09
SOX17-201ENST00000297316 ATXN8Q156A1 80 aa14.5□□□□□ -0.09
SOX17-201ENST00000297316 TRBV30A0A0K0K1B3 111 aa14.49□□□□□ -0.09
SOX17-201ENST00000297316 M0QXV9 152 aa14.49□□□□□ -0.09
SOX17-201ENST00000297316 KLK12Q9UKR0 248 aa14.49□□□□□ -0.09
SOX17-201ENST00000297316 TRAV10A0A0B4J240 114 aa14.48□□□□□ -0.09
SOX17-201ENST00000297316 LINC01620Q4KN68 170 aa14.48□□□□□ -0.09
SOX17-201ENST00000297316 CD164L2Q6UWJ8 174 aa14.48□□□□□ -0.09
SOX17-201ENST00000297316 A0A1B0GV72 72 aa14.47□□□□□ -0.09
SOX17-201ENST00000297316 MIR7-3HGQ8N6C7 128 aa14.46□□□□□ -0.1
SOX17-201ENST00000297316 C2orf82Q6UX34 121 aa14.45□□□□□ -0.1
SOX17-201ENST00000297316 C6orf226Q5I0X4 101 aa14.44□□□□□ -0.1
SOX17-201ENST00000297316 B9D2Q9BPU9 175 aa14.44□□□□□ -0.1
SOX17-201ENST00000297316 COX7A2LO14548 114 aa14.44□□□□□ -0.1
SOX17-201ENST00000297316 RPL13AP40429 203 aaKnown RBP14.44□□□□□ -0.1
SOX17-201ENST00000297316 CKS1BP61024 79 aa14.44□□□□□ -0.1
SOX17-201ENST00000297316 ENHOQ6UWT2 76 aa14.44□□□□□ -0.1
SOX17-201ENST00000297316 NTN5Q8WTR8 489 aaPredicted RBP14.44□□□□□ -0.1
SOX17-201ENST00000297316 PRKDCP78527 4128 aaKnown RBP14.43□□□□□ -0.1
SOX17-201ENST00000297316 PRR34Q9NV39 138 aa14.43□□□□□ -0.1
SOX17-201ENST00000297316 Q8IZM0 81 aa14.43□□□□□ -0.1
SOX17-201ENST00000297316 LINC01561Q8N1V8 128 aa14.43□□□□□ -0.1
SOX17-201ENST00000297316 KIAA0087Q14695 138 aa14.42□□□□□ -0.1
SOX17-201ENST00000297316 TRBV10-2A0A0K0K1G8 114 aa14.42□□□□□ -0.1
SOX17-201ENST00000297316 PFN2P35080 140 aa14.42□□□□□ -0.1
SOX17-201ENST00000297316 LINC00158P58513 81 aa14.42□□□□□ -0.1
SOX17-201ENST00000297316 UBE2WQ96B02 151 aa14.41□□□□□ -0.1
SOX17-201ENST00000297316 IBA57-AS1B1ANH7 110 aa14.4□□□□□ -0.1
SOX17-201ENST00000297316 LINC01600Q96MT4 127 aa14.4□□□□□ -0.11
SOX17-201ENST00000297316 COX6CP09669 75 aa14.39□□□□□ -0.11
SOX17-201ENST00000297316 MEGF8Q7Z7M0 2845 aa14.39□□□□□ -0.11
SOX17-201ENST00000297316 TEX49A0A1B0GTD5 131 aa14.38□□□□□ -0.11
SOX17-201ENST00000297316 MALP21145 153 aa14.38□□□□□ -0.11
SOX17-201ENST00000297316 COPS9Q8WXC6 57 aa14.38□□□□□ -0.11
SOX17-201ENST00000297316 CLEC2BQ92478 149 aa14.38□□□□□ -0.11
SOX17-201ENST00000297316 CCL18P55774 89 aa14.36□□□□□ -0.11
SOX17-201ENST00000297316 C15orf53Q8NAA6 179 aa14.36□□□□□ -0.11
SOX17-201ENST00000297316 LYSTQ99698 3801 aa14.36□□□□□ -0.11
SOX17-201ENST00000297316 PPDPFQ9H3Y8 114 aa14.36□□□□□ -0.11
SOX17-201ENST00000297316 LINC00588Q9Y4M8 146 aa14.36□□□□□ -0.11
SOX17-201ENST00000297316 CRPP02741 224 aa14.35□□□□□ -0.11
SOX17-201ENST00000297316 CSMD3Q7Z407 3707 aa14.34□□□□□ -0.11
SOX17-201ENST00000297316 IGKV2-28A0A075B6P5 120 aa14.34□□□□□ -0.11
SOX17-201ENST00000297316 IGKV2D-28P01615 120 aa14.34□□□□□ -0.11
SOX17-201ENST00000297316 LINC00526Q96FQ7 95 aa14.34□□□□□ -0.11
SOX17-201ENST00000297316 SND1-IT1Q9HBX3 110 aa14.34□□□□□ -0.11
SOX17-201ENST00000297316 CFAP161Q6P656 301 aa14.33□□□□□ -0.11
SOX17-201ENST00000297316 LST1O00453 97 aa14.33□□□□□ -0.12
SOX17-201ENST00000297316 C6orf223Q8N319 242 aa14.33□□□□□ -0.12
SOX17-201ENST00000297316 C9orf116Q5BN46 136 aaPredicted RBP14.32□□□□□ -0.12
SOX17-201ENST00000297316 LINC00337Q8N6G1 96 aa14.32□□□□□ -0.12
SOX17-201ENST00000297316 H3BT86 120 aa14.31□□□□□ -0.12
SOX17-201ENST00000297316 LINC01556Q5JQF7 62 aa14.31□□□□□ -0.12
SOX17-201ENST00000297316 C10orf25Q5T742 122 aa14.3□□□□□ -0.12
SOX17-201ENST00000297316 TRAV8-4A0A0B4J246 113 aa14.3□□□□□ -0.12
SOX17-201ENST00000297316 SPAG11BQ08648 103 aa14.3□□□□□ -0.12
SOX17-201ENST00000297316 KLK5Q9Y337 293 aaPredicted RBP14.3□□□□□ -0.12
SOX17-201ENST00000297316 CXCL5P42830 114 aa14.28□□□□□ -0.12
SOX17-201ENST00000297316 KRTAP26-1Q6PEX3 210 aa14.28□□□□□ -0.12
SOX17-201ENST00000297316 DNAH10OSP0CZ25 163 aa14.27□□□□□ -0.13
SOX17-201ENST00000297316 UNQ6190/PRO20217Q6UXQ8 127 aa14.27□□□□□ -0.13
SOX17-201ENST00000297316 SNCGO76070 127 aa14.26□□□□□ -0.13
SOX17-201ENST00000297316 TENM2Q9NT68 2774 aa14.25□□□□□ -0.13
SOX17-201ENST00000297316 DYNC2H1Q8NCM8 4307 aaKnown RBP14.25□□□□□ -0.13
SOX17-201ENST00000297316 Q9HAA7 133 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms