RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 NXT2Q9NPJ8 142 aaKnown RBP11.73□□□□□ -0.53
CXCL3-201ENST00000296026 CDKN2A-AS1Q9UH64 79 aa11.73□□□□□ -0.53
CXCL3-201ENST00000296026 ZNF861PO60384 105 aa11.72□□□□□ -0.53
CXCL3-201ENST00000296026 SEC11AP67812 179 aa11.72□□□□□ -0.53
CXCL3-201ENST00000296026 PAPPA-AS1Q5QFB9 102 aa11.71□□□□□ -0.53
CXCL3-201ENST00000296026 CTDSP1Q9GZU7 261 aa11.71□□□□□ -0.53
CXCL3-201ENST00000296026 GEMIN7Q9H840 131 aaKnown RBP11.71□□□□□ -0.53
CXCL3-201ENST00000296026 F8VRH5 84 aa11.7□□□□□ -0.54
CXCL3-201ENST00000296026 NUPR1O60356 82 aa11.7□□□□□ -0.54
CXCL3-201ENST00000296026 LBHQ53QV2 105 aaPredicted RBP11.7□□□□□ -0.54
CXCL3-201ENST00000296026 CARHSP1Q9Y2V2 147 aaKnown RBP11.7□□□□□ -0.54
CXCL3-201ENST00000296026 G0S2P27469 103 aa11.69□□□□□ -0.54
CXCL3-201ENST00000296026 PRR4Q16378 134 aa11.69□□□□□ -0.54
CXCL3-201ENST00000296026 TIMM17AQ99595 171 aa11.69□□□□□ -0.54
CXCL3-201ENST00000296026 TOMM6Q96B49 74 aa11.68□□□□□ -0.54
CXCL3-201ENST00000296026 CXCL5P42830 114 aa11.66□□□□□ -0.54
CXCL3-201ENST00000296026 MRPL55Q7Z7F7 128 aaKnown RBP11.66□□□□□ -0.54
CXCL3-201ENST00000296026 TP73-AS1Q9UF72 201 aa11.66□□□□□ -0.54
CXCL3-201ENST00000296026 RAB14P61106 215 aa11.65□□□□□ -0.54
CXCL3-201ENST00000296026 KIAA1644Q3SXP7 199 aa11.65□□□□□ -0.54
CXCL3-201ENST00000296026 ERASQ7Z444 233 aa11.65□□□□□ -0.54
CXCL3-201ENST00000296026 SMIM1B2RUZ4 78 aa11.64□□□□□ -0.55
CXCL3-201ENST00000296026 SCGB3A1Q96QR1 104 aa11.64□□□□□ -0.55
CXCL3-201ENST00000296026 RPL28P46779 137 aaKnown RBP11.63□□□□□ -0.55
CXCL3-201ENST00000296026 BCE1O60756 84 aa11.62□□□□□ -0.55
CXCL3-201ENST00000296026 PDZD11Q5EBL8 140 aa11.62□□□□□ -0.55
CXCL3-201ENST00000296026 COX7B2Q8TF08 81 aa11.62□□□□□ -0.55
CXCL3-201ENST00000296026 TINCRA0A1B0GVN0 87 aa11.61□□□□□ -0.55
CXCL3-201ENST00000296026 ADCYAP1P18509 176 aa11.61□□□□□ -0.55
CXCL3-201ENST00000296026 LINC00167Q96N53 147 aa11.61□□□□□ -0.55
CXCL3-201ENST00000296026 RPL37AP8A6NKH3 93 aa11.6□□□□□ -0.55
CXCL3-201ENST00000296026 TSPAN13O95857 204 aa11.6□□□□□ -0.55
CXCL3-201ENST00000296026 A0A087X002 238 aa11.59□□□□□ -0.55
CXCL3-201ENST00000296026 IGLV5-45A0A087WSX0 123 aa11.58□□□□□ -0.56
CXCL3-201ENST00000296026 GAGE10A6NGK3 116 aa11.57□□□□□ -0.56
CXCL3-201ENST00000296026 LINC01549A6NIU2 74 aa11.57□□□□□ -0.56
CXCL3-201ENST00000296026 CRYGAP11844 174 aa11.57□□□□□ -0.56
CXCL3-201ENST00000296026 RAB5BP61020 215 aa11.57□□□□□ -0.56
CXCL3-201ENST00000296026 CST9LQ9H4G1 147 aa11.57□□□□□ -0.56
CXCL3-201ENST00000296026 TRAV9-1A0A075B6T8 112 aa11.56□□□□□ -0.56
CXCL3-201ENST00000296026 SPINK8P0C7L1 97 aa11.56□□□□□ -0.56
CXCL3-201ENST00000296026 TYMSOSQ8TAI1 123 aa11.56□□□□□ -0.56
CXCL3-201ENST00000296026 LINC01546A6NGU7 62 aa11.55□□□□□ -0.56
CXCL3-201ENST00000296026 CLLU1Q5K131 121 aa11.55□□□□□ -0.56
CXCL3-201ENST00000296026 IGLV5-37A0A075B6J1 123 aa11.54□□□□□ -0.56
CXCL3-201ENST00000296026 PMVKQ15126 192 aa11.54□□□□□ -0.56
CXCL3-201ENST00000296026 NKAPP1Q8N9T2 125 aa11.54□□□□□ -0.56
CXCL3-201ENST00000296026 GNB1LQ9BYB4 327 aa11.53□□□□□ -0.56
CXCL3-201ENST00000296026 ANAPC11Q9NYG5 84 aa11.53□□□□□ -0.56
CXCL3-201ENST00000296026 MRPL18Q9H0U6 180 aaKnown RBP11.52□□□□□ -0.57
CXCL3-201ENST00000296026 TMEM218A2RU14 115 aa11.51□□□□□ -0.57
CXCL3-201ENST00000296026 S100PP25815 95 aa11.51□□□□□ -0.57
CXCL3-201ENST00000296026 UBE2AP49459 152 aa11.51□□□□□ -0.57
CXCL3-201ENST00000296026 KRTAP13-1Q8IUC0 172 aa11.51□□□□□ -0.57
CXCL3-201ENST00000296026 H3BRM9 83 aa11.5□□□□□ -0.57
CXCL3-201ENST00000296026 ATP5LO75964 103 aa11.5□□□□□ -0.57
CXCL3-201ENST00000296026 UQCC3Q6UW78 93 aa11.5□□□□□ -0.57
CXCL3-201ENST00000296026 FA2HQ7L5A8 372 aa11.5□□□□□ -0.57
CXCL3-201ENST00000296026 SMCO4Q9NRQ5 59 aa11.5□□□□□ -0.57
CXCL3-201ENST00000296026 SCO1O75880 301 aa11.49□□□□□ -0.57
CXCL3-201ENST00000296026 IGKV2-28A0A075B6P5 120 aa11.48□□□□□ -0.57
CXCL3-201ENST00000296026 IGKV2D-28P01615 120 aa11.48□□□□□ -0.57
CXCL3-201ENST00000296026 PFN2P35080 140 aa11.48□□□□□ -0.57
CXCL3-201ENST00000296026 KRTAP13-2Q52LG2 175 aa11.48□□□□□ -0.57
CXCL3-201ENST00000296026 COX19Q49B96 90 aa11.47□□□□□ -0.57
CXCL3-201ENST00000296026 FABP9Q0Z7S8 132 aa11.46□□□□□ -0.57
CXCL3-201ENST00000296026 IGLV5-39A0A0G2JS06 123 aa11.45□□□□□ -0.58
CXCL3-201ENST00000296026 IGLC3P0DOY3 106 aa11.45□□□□□ -0.58
CXCL3-201ENST00000296026 FAM229BQ4G0N7 80 aa11.45□□□□□ -0.58
CXCL3-201ENST00000296026 SEC11CQ9BY50 192 aa11.45□□□□□ -0.58
CXCL3-201ENST00000296026 NDUFA6P56556 154 aa11.44□□□□□ -0.58
CXCL3-201ENST00000296026 A0A0U1RQV1 116 aa11.43□□□□□ -0.58
CXCL3-201ENST00000296026 VPREB1P12018 145 aa11.43□□□□□ -0.58
CXCL3-201ENST00000296026 ZNF22P17026 224 aaPredicted RBP11.43□□□□□ -0.58
CXCL3-201ENST00000296026 PRLHP81277 87 aa11.43□□□□□ -0.58
CXCL3-201ENST00000296026 SND1-IT1Q9HBX3 110 aa11.43□□□□□ -0.58
CXCL3-201ENST00000296026 MUC2Q02817 5179 aa11.43□□□□□ -0.58
CXCL3-201ENST00000296026 A0A096LNJ9 63 aa11.42□□□□□ -0.58
CXCL3-201ENST00000296026 FAM19A1Q7Z5A9 133 aa11.42□□□□□ -0.58
CXCL3-201ENST00000296026 LINC00304Q8N9R0 145 aa11.42□□□□□ -0.58
CXCL3-201ENST00000296026 RETNLBQ9BQ08 111 aa11.42□□□□□ -0.58
CXCL3-201ENST00000296026 ERG28Q9UKR5 140 aa11.42□□□□□ -0.58
CXCL3-201ENST00000296026 TMEM126AQ9H061 195 aa11.41□□□□□ -0.58
CXCL3-201ENST00000296026 IGKV2D-26A0A0A0MRZ7 120 aa11.4□□□□□ -0.58
CXCL3-201ENST00000296026 TMEM238C9JI98 176 aa11.4□□□□□ -0.58
CXCL3-201ENST00000296026 ZNF625Q96I27 306 aaPredicted RBP11.4□□□□□ -0.58
CXCL3-201ENST00000296026 RPL24P83731 157 aaKnown RBP11.39□□□□□ -0.59
CXCL3-201ENST00000296026 IFITM2Q01629 132 aa11.39□□□□□ -0.59
CXCL3-201ENST00000296026 COX17Q14061 63 aa11.39□□□□□ -0.59
CXCL3-201ENST00000296026 URB1-AS1Q96HZ7 61 aa11.39□□□□□ -0.59
CXCL3-201ENST00000296026 M0R378 163 aa11.37□□□□□ -0.59
CXCL3-201ENST00000296026 LINC00614P0C842 121 aa11.37□□□□□ -0.59
CXCL3-201ENST00000296026 Q8NDZ9 215 aa11.37□□□□□ -0.59
CXCL3-201ENST00000296026 RPS10P5Q9NQ39 176 aa11.37□□□□□ -0.59
CXCL3-201ENST00000296026 HBDP02042 147 aa11.36□□□□□ -0.59
CXCL3-201ENST00000296026 PMCHL1Q16048 86 aa11.36□□□□□ -0.59
CXCL3-201ENST00000296026 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
CXCL3-201ENST00000296026 C11orf86A6NJI1 115 aa11.35□□□□□ -0.59
CXCL3-201ENST00000296026 RHEBQ15382 184 aa11.35□□□□□ -0.59
CXCL3-201ENST00000296026 TMEM170BQ5T4T1 132 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms