RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 CDIP1Q9H305 208 aa9.66□□□□□ -0.86
NXF1-201ENST00000294172 ANGP03950 147 aaKnown RBP9.65□□□□□ -0.86
NXF1-201ENST00000294172 SCGB1A1P11684 91 aa9.65□□□□□ -0.86
NXF1-201ENST00000294172 COX6CP09669 75 aa9.65□□□□□ -0.87
NXF1-201ENST00000294172 LINC00158P58513 81 aa9.65□□□□□ -0.87
NXF1-201ENST00000294172 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.87
NXF1-201ENST00000294172 C6orf226Q5I0X4 101 aa9.64□□□□□ -0.87
NXF1-201ENST00000294172 MIR7-3HGQ8N6C7 128 aa9.64□□□□□ -0.87
NXF1-201ENST00000294172 IGLV10-54A0A075B6I4 117 aa9.64□□□□□ -0.87
NXF1-201ENST00000294172 PFN2P35080 140 aa9.63□□□□□ -0.87
NXF1-201ENST00000294172 COL6A5A8TX70 2615 aa9.63□□□□□ -0.87
NXF1-201ENST00000294172 M0QXV9 152 aa9.62□□□□□ -0.87
NXF1-201ENST00000294172 CLEC2BQ92478 149 aa9.62□□□□□ -0.87
NXF1-201ENST00000294172 NOTCH1P46531 2555 aa9.62□□□□□ -0.87
NXF1-201ENST00000294172 REG3AQ06141 175 aa9.62□□□□□ -0.87
NXF1-201ENST00000294172 CMYA5Q8N3K9 4069 aa9.62□□□□□ -0.87
NXF1-201ENST00000294172 NTN5Q8WTR8 489 aaPredicted RBP9.61□□□□□ -0.87
NXF1-201ENST00000294172 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
NXF1-201ENST00000294172 SHISA2Q6UWI4 295 aa9.61□□□□□ -0.87
NXF1-201ENST00000294172 CHCHD10Q8WYQ3 142 aaPredicted RBP9.61□□□□□ -0.87
NXF1-201ENST00000294172 MT-ATP8P03928 68 aa9.6□□□□□ -0.87
NXF1-201ENST00000294172 LELP1Q5T871 98 aa9.6□□□□□ -0.87
NXF1-201ENST00000294172 C2orf82Q6UX34 121 aa9.6□□□□□ -0.87
NXF1-201ENST00000294172 IBA57-AS1B1ANH7 110 aa9.59□□□□□ -0.87
NXF1-201ENST00000294172 XGP55808 180 aa9.59□□□□□ -0.87
NXF1-201ENST00000294172 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
NXF1-201ENST00000294172 CD164L2Q6UWJ8 174 aa9.59□□□□□ -0.87
NXF1-201ENST00000294172 SND1-IT1Q9HBX3 110 aa9.59□□□□□ -0.87
NXF1-201ENST00000294172 COX7A2LO14548 114 aa9.59□□□□□ -0.87
NXF1-201ENST00000294172 TENM3Q9P273 2699 aa9.58□□□□□ -0.88
NXF1-201ENST00000294172 MALP21145 153 aa9.58□□□□□ -0.88
NXF1-201ENST00000294172 TEX49A0A1B0GTD5 131 aa9.57□□□□□ -0.88
NXF1-201ENST00000294172 CKS1BP61024 79 aa9.57□□□□□ -0.88
NXF1-201ENST00000294172 Q8IZM0 81 aa9.57□□□□□ -0.88
NXF1-201ENST00000294172 BAHCC1Q9P281 2608 aa9.57□□□□□ -0.88
NXF1-201ENST00000294172 LST1O00453 97 aa9.56□□□□□ -0.88
NXF1-201ENST00000294172 CCL18P55774 89 aa9.56□□□□□ -0.88
NXF1-201ENST00000294172 CRPP02741 224 aa9.56□□□□□ -0.88
NXF1-201ENST00000294172 LYPD5Q6UWN5 251 aa9.56□□□□□ -0.88
NXF1-201ENST00000294172 Q6ZTC4 211 aa9.56□□□□□ -0.88
NXF1-201ENST00000294172 KLK12Q9UKR0 248 aa9.56□□□□□ -0.88
NXF1-201ENST00000294172 UBE2WQ96B02 151 aa9.55□□□□□ -0.88
NXF1-201ENST00000294172 LINC01600Q96MT4 127 aa9.55□□□□□ -0.88
NXF1-201ENST00000294172 PPDPFQ9H3Y8 114 aa9.55□□□□□ -0.88
NXF1-201ENST00000294172 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
NXF1-201ENST00000294172 TRAV13-2A0A0B4J235 113 aa9.55□□□□□ -0.88
NXF1-201ENST00000294172 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
NXF1-201ENST00000294172 LINC01561Q8N1V8 128 aa9.55□□□□□ -0.88
NXF1-201ENST00000294172 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
NXF1-201ENST00000294172 KPRPQ5T749 579 aaPredicted RBP9.54□□□□□ -0.88
NXF1-201ENST00000294172 CYSRT1A8MQ03 144 aa9.53□□□□□ -0.88
NXF1-201ENST00000294172 H3BT86 120 aa9.53□□□□□ -0.88
NXF1-201ENST00000294172 KIAA0087Q14695 138 aa9.53□□□□□ -0.88
NXF1-201ENST00000294172 NBEAL1Q6ZS30 2694 aa9.53□□□□□ -0.88
NXF1-201ENST00000294172 A0A0J9YWU9 116 aa9.53□□□□□ -0.88
NXF1-201ENST00000294172 TRAV8-4A0A0B4J246 113 aa9.51□□□□□ -0.89
NXF1-201ENST00000294172 NANOS2P60321 138 aaKnown RBP9.51□□□□□ -0.89
NXF1-201ENST00000294172 A0A1B0GV72 72 aa9.5□□□□□ -0.89
NXF1-201ENST00000294172 PRB2P02812 416 aaPredicted RBP9.5□□□□□ -0.89
NXF1-201ENST00000294172 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
NXF1-201ENST00000294172 ENHOQ6UWT2 76 aa9.5□□□□□ -0.89
NXF1-201ENST00000294172 PRR34Q9NV39 138 aa9.5□□□□□ -0.89
NXF1-201ENST00000294172 WFDC10BQ8IUB3 73 aa9.5□□□□□ -0.89
NXF1-201ENST00000294172 OR13C6PQ8NH95 151 aa9.5□□□□□ -0.89
NXF1-201ENST00000294172 LINC00526Q96FQ7 95 aa9.5□□□□□ -0.89
NXF1-201ENST00000294172 CXCL5P42830 114 aa9.49□□□□□ -0.89
NXF1-201ENST00000294172 DNAH3Q8TD57 4116 aa9.49□□□□□ -0.89
NXF1-201ENST00000294172 RPL28P46779 137 aaKnown RBP9.49□□□□□ -0.89
NXF1-201ENST00000294172 C6orf223Q8N319 242 aa9.49□□□□□ -0.89
NXF1-201ENST00000294172 SMIM11BQ8TCY0 68 aa9.49□□□□□ -0.89
NXF1-201ENST00000294172 H3BNG1 76 aa9.48□□□□□ -0.89
NXF1-201ENST00000294172 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
NXF1-201ENST00000294172 C11orf45Q8TAV5 145 aa9.48□□□□□ -0.89
NXF1-201ENST00000294172 FAM218AQ96MZ4 157 aa9.48□□□□□ -0.89
NXF1-201ENST00000294172 DEFB131BA0A096LNP1 70 aa9.47□□□□□ -0.89
NXF1-201ENST00000294172 PRR3P79522 188 aaKnown RBP9.47□□□□□ -0.89
NXF1-201ENST00000294172 KLK5Q9Y337 293 aaPredicted RBP9.47□□□□□ -0.89
NXF1-201ENST00000294172 SNCGO76070 127 aa9.46□□□□□ -0.9
NXF1-201ENST00000294172 COX17Q14061 63 aa9.46□□□□□ -0.9
NXF1-201ENST00000294172 C10orf25Q5T742 122 aa9.46□□□□□ -0.9
NXF1-201ENST00000294172 UNQ6190/PRO20217Q6UXQ8 127 aa9.46□□□□□ -0.9
NXF1-201ENST00000294172 ESRGQ1W209 222 aa9.45□□□□□ -0.9
NXF1-201ENST00000294172 MGAM2Q2M2H8 2515 aa9.45□□□□□ -0.9
NXF1-201ENST00000294172 TRACP01848 142 aa9.44□□□□□ -0.9
NXF1-201ENST00000294172 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
NXF1-201ENST00000294172 Q9HAA7 133 aa9.44□□□□□ -0.9
NXF1-201ENST00000294172 DEFB121Q5J5C9 76 aa9.43□□□□□ -0.9
NXF1-201ENST00000294172 C15orf53Q8NAA6 179 aa9.43□□□□□ -0.9
NXF1-201ENST00000294172 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
NXF1-201ENST00000294172 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
NXF1-201ENST00000294172 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
NXF1-201ENST00000294172 A0A087WYN8 130 aa9.42□□□□□ -0.9
NXF1-201ENST00000294172 BAALC-AS2P0C853 105 aa9.42□□□□□ -0.9
NXF1-201ENST00000294172 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
NXF1-201ENST00000294172 H0YGX0 51 aa9.39□□□□□ -0.91
NXF1-201ENST00000294172 NCR3O14931 201 aa9.39□□□□□ -0.91
NXF1-201ENST00000294172 DNAL4O96015 105 aa9.39□□□□□ -0.91
NXF1-201ENST00000294172 HIGD2BQ4VC39 106 aa9.39□□□□□ -0.91
NXF1-201ENST00000294172 NDUFC2O95298 119 aa9.39□□□□□ -0.91
NXF1-201ENST00000294172 Q8NDZ9 215 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms