RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 GAGE12HA6NDE8 117 aa11.3□□□□□ -0.6
HIF3A-203ENST00000291300 COX7A2LO14548 114 aa11.3□□□□□ -0.6
HIF3A-203ENST00000291300 KIAA0087Q14695 138 aa11.29□□□□□ -0.6
HIF3A-203ENST00000291300 LOC107984156A0A0G2JMH3 177 aa11.29□□□□□ -0.6
HIF3A-203ENST00000291300 H3BMG7 143 aa11.29□□□□□ -0.6
HIF3A-203ENST00000291300 C6orf226Q5I0X4 101 aa11.29□□□□□ -0.6
HIF3A-203ENST00000291300 ARL17AQ8IVW1 177 aa11.29□□□□□ -0.6
HIF3A-203ENST00000291300 UBE2WQ96B02 151 aa11.29□□□□□ -0.6
HIF3A-203ENST00000291300 STAB2Q8WWQ8 2551 aa11.28□□□□□ -0.6
HIF3A-203ENST00000291300 DNHD1Q96M86 4753 aa11.28□□□□□ -0.6
HIF3A-203ENST00000291300 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.28□□□□□ -0.6
HIF3A-203ENST00000291300 IFITM1P13164 125 aa11.28□□□□□ -0.6
HIF3A-203ENST00000291300 MTURNQ8N3F0 131 aa11.28□□□□□ -0.6
HIF3A-203ENST00000291300 MIR7-3HGQ8N6C7 128 aa11.27□□□□□ -0.6
HIF3A-203ENST00000291300 LINC00526Q96FQ7 95 aa11.27□□□□□ -0.6
HIF3A-203ENST00000291300 PFN2P35080 140 aa11.27□□□□□ -0.61
HIF3A-203ENST00000291300 Q8IZM0 81 aa11.27□□□□□ -0.61
HIF3A-203ENST00000291300 TRAV10A0A0B4J240 114 aa11.26□□□□□ -0.61
HIF3A-203ENST00000291300 ERG28Q9UKR5 140 aa11.26□□□□□ -0.61
HIF3A-203ENST00000291300 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
HIF3A-203ENST00000291300 MALP21145 153 aa11.25□□□□□ -0.61
HIF3A-203ENST00000291300 LINC00158P58513 81 aa11.25□□□□□ -0.61
HIF3A-203ENST00000291300 C6orf223Q8N319 242 aa11.25□□□□□ -0.61
HIF3A-203ENST00000291300 TCL1BO95988 128 aa11.23□□□□□ -0.61
HIF3A-203ENST00000291300 PSMB2P49721 201 aa11.23□□□□□ -0.61
HIF3A-203ENST00000291300 CRPP02741 224 aa11.23□□□□□ -0.61
HIF3A-203ENST00000291300 Q1RN00 199 aa11.23□□□□□ -0.61
HIF3A-203ENST00000291300 C9orf116Q5BN46 136 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-203ENST00000291300 KRTAP26-1Q6PEX3 210 aa11.23□□□□□ -0.61
HIF3A-203ENST00000291300 IBA57-AS1B1ANH7 110 aa11.22□□□□□ -0.61
HIF3A-203ENST00000291300 RPL13AP40429 203 aaKnown RBP11.22□□□□□ -0.61
HIF3A-203ENST00000291300 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
HIF3A-203ENST00000291300 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.61
HIF3A-203ENST00000291300 TRIAP1O43715 76 aa11.21□□□□□ -0.62
HIF3A-203ENST00000291300 CCL18P55774 89 aa11.21□□□□□ -0.62
HIF3A-203ENST00000291300 CKS1BP61024 79 aa11.21□□□□□ -0.62
HIF3A-203ENST00000291300 LYSTQ99698 3801 aa11.21□□□□□ -0.62
HIF3A-203ENST00000291300 WFDC2Q14508 124 aa11.2□□□□□ -0.62
HIF3A-203ENST00000291300 PRO0461Q9UI25 63 aa11.2□□□□□ -0.62
HIF3A-203ENST00000291300 DNAH1Q9P2D7 4330 aa11.19□□□□□ -0.62
HIF3A-203ENST00000291300 PRKDCP78527 4128 aaKnown RBP11.19□□□□□ -0.62
HIF3A-203ENST00000291300 SCGB1C2P0DMR2 95 aa11.19□□□□□ -0.62
HIF3A-203ENST00000291300 SPAG11BQ08648 103 aa11.19□□□□□ -0.62
HIF3A-203ENST00000291300 LINC01556Q5JQF7 62 aa11.19□□□□□ -0.62
HIF3A-203ENST00000291300 CFAP161Q6P656 301 aa11.19□□□□□ -0.62
HIF3A-203ENST00000291300 UNQ6190/PRO20217Q6UXQ8 127 aa11.19□□□□□ -0.62
HIF3A-203ENST00000291300 KLK5Q9Y337 293 aaPredicted RBP11.19□□□□□ -0.62
HIF3A-203ENST00000291300 IGKV2-28A0A075B6P5 120 aa11.18□□□□□ -0.62
HIF3A-203ENST00000291300 IGKV2D-28P01615 120 aa11.18□□□□□ -0.62
HIF3A-203ENST00000291300 TRAV8-4A0A0B4J246 113 aa11.17□□□□□ -0.62
HIF3A-203ENST00000291300 C15orf53Q8NAA6 179 aa11.17□□□□□ -0.62
HIF3A-203ENST00000291300 SND1-IT1Q9HBX3 110 aa11.17□□□□□ -0.62
HIF3A-203ENST00000291300 SMCPP49901 116 aaPredicted RBP11.17□□□□□ -0.62
HIF3A-203ENST00000291300 B9D2Q9BPU9 175 aa11.17□□□□□ -0.62
HIF3A-203ENST00000291300 TRBV30A0A0K0K1B3 111 aa11.16□□□□□ -0.62
HIF3A-203ENST00000291300 LINC00337Q8N6G1 96 aa11.16□□□□□ -0.62
HIF3A-203ENST00000291300 CSMD3Q7Z407 3707 aa11.16□□□□□ -0.62
HIF3A-203ENST00000291300 DNAH10OSP0CZ25 163 aa11.15□□□□□ -0.62
HIF3A-203ENST00000291300 HIGD2BQ4VC39 106 aa11.15□□□□□ -0.62
HIF3A-203ENST00000291300 COPS9Q8WXC6 57 aa11.14□□□□□ -0.63
HIF3A-203ENST00000291300 Q9HAA7 133 aa11.14□□□□□ -0.63
HIF3A-203ENST00000291300 CXCL5P42830 114 aa11.14□□□□□ -0.63
HIF3A-203ENST00000291300 CLEC2BQ92478 149 aa11.14□□□□□ -0.63
HIF3A-203ENST00000291300 PPDPFQ9H3Y8 114 aa11.14□□□□□ -0.63
HIF3A-203ENST00000291300 Q8NDZ9 215 aa11.13□□□□□ -0.63
HIF3A-203ENST00000291300 DYNC2H1Q8NCM8 4307 aaKnown RBP11.13□□□□□ -0.63
HIF3A-203ENST00000291300 F8W1H4 67 aa11.12□□□□□ -0.63
HIF3A-203ENST00000291300 PRR3P79522 188 aaKnown RBP11.12□□□□□ -0.63
HIF3A-203ENST00000291300 OCIAD2Q56VL3 154 aa11.12□□□□□ -0.63
HIF3A-203ENST00000291300 C15orf56Q8N910 161 aa11.12□□□□□ -0.63
HIF3A-203ENST00000291300 IGKV2D-24A0A075B6R9 120 aa11.12□□□□□ -0.63
HIF3A-203ENST00000291300 LYRM7Q5U5X0 104 aa11.12□□□□□ -0.63
HIF3A-203ENST00000291300 NTN5Q8WTR8 489 aaPredicted RBP11.12□□□□□ -0.63
HIF3A-203ENST00000291300 TRBV20-1A0A075B6N2 111 aa11.11□□□□□ -0.63
HIF3A-203ENST00000291300 MEGF8Q7Z7M0 2845 aa11.11□□□□□ -0.63
HIF3A-203ENST00000291300 C1orf43Q9BWL3 253 aa11.11□□□□□ -0.63
HIF3A-203ENST00000291300 ETDBQ3ZM63 59 aa11.1□□□□□ -0.63
HIF3A-203ENST00000291300 C6orf48Q9UBA6 75 aa11.1□□□□□ -0.63
HIF3A-203ENST00000291300 CASC10Q5T4H9 136 aa11.09□□□□□ -0.63
HIF3A-203ENST00000291300 DNAH7Q8WXX0 4024 aa11.08□□□□□ -0.64
HIF3A-203ENST00000291300 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
HIF3A-203ENST00000291300 COX17Q14061 63 aa11.08□□□□□ -0.64
HIF3A-203ENST00000291300 TENM2Q9NT68 2774 aa11.07□□□□□ -0.64
HIF3A-203ENST00000291300 C9JAW5 83 aa11.06□□□□□ -0.64
HIF3A-203ENST00000291300 DNAH10Q8IVF4 4471 aa11.06□□□□□ -0.64
HIF3A-203ENST00000291300 TRAV13-2A0A0B4J235 113 aa11.06□□□□□ -0.64
HIF3A-203ENST00000291300 ATXN8Q156A1 80 aa11.06□□□□□ -0.64
HIF3A-203ENST00000291300 ZNF561-AS1K7EIQ3 104 aa11.05□□□□□ -0.64
HIF3A-203ENST00000291300 LINC01620Q4KN68 170 aa11.05□□□□□ -0.64
HIF3A-203ENST00000291300 Q6ZRU5 148 aa11.05□□□□□ -0.64
HIF3A-203ENST00000291300 SMIM11BQ8TCY0 68 aa11.05□□□□□ -0.64
HIF3A-203ENST00000291300 UPK3BQ9BT76 320 aa11.05□□□□□ -0.64
HIF3A-203ENST00000291300 APLNQ9ULZ1 77 aa11.05□□□□□ -0.64
HIF3A-203ENST00000291300 COX6CP09669 75 aa11.04□□□□□ -0.64
HIF3A-203ENST00000291300 FAM218AQ96MZ4 157 aa11.04□□□□□ -0.64
HIF3A-203ENST00000291300 KRTAP1-5Q9BYS1 174 aa11.04□□□□□ -0.64
HIF3A-203ENST00000291300 GVQW2A0A096LPI5 108 aaPredicted RBP11.03□□□□□ -0.64
HIF3A-203ENST00000291300 CAMK2N2Q96S95 79 aa11.03□□□□□ -0.64
HIF3A-203ENST00000291300 LST1O00453 97 aa11.03□□□□□ -0.64
HIF3A-203ENST00000291300 OR13C6PQ8NH95 151 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms