RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 UBE2WQ96B02 151 aa4.19□□□□□ -1.74
TNFSF4-201ENST00000281834 TRBV20-1A0A075B6N2 111 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 REG3AQ06141 175 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 NTN5Q8WTR8 489 aaPredicted RBP4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 CHCHD10Q8WYQ3 142 aaPredicted RBP4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 SPANXDQ9BXN6 97 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 SPANXCQ9NY87 97 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 MIFP14174 115 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 PRR3P79522 188 aaKnown RBP4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 ATXN8Q156A1 80 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 Q6ZTC4 211 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 SND1-IT1Q9HBX3 110 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 ANK2Q01484 3957 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 B5MCH6 92 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 LINC01620Q4KN68 170 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 RNF183Q96D59 192 aa4.18□□□□□ -1.74
TNFSF4-201ENST00000281834 TEX49A0A1B0GTD5 131 aa4.17□□□□□ -1.74
TNFSF4-201ENST00000281834 FOXI1Q12951 378 aa4.17□□□□□ -1.74
TNFSF4-201ENST00000281834 MRPL23Q16540 153 aaKnown RBP4.17□□□□□ -1.74
TNFSF4-201ENST00000281834 CFAP161Q6P656 301 aa4.17□□□□□ -1.74
TNFSF4-201ENST00000281834 WFDC9Q8NEX5 89 aa4.17□□□□□ -1.74
TNFSF4-201ENST00000281834 CRPP02741 224 aa4.17□□□□□ -1.74
TNFSF4-201ENST00000281834 NANOS2P60321 138 aaKnown RBP4.17□□□□□ -1.74
TNFSF4-201ENST00000281834 A0A087WZ39 114 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 COX7A2LO14548 114 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 IFITM1P13164 125 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 C6orf223Q8N319 242 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 A0A0J9YWU9 116 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 GAGE12HA6NDE8 117 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 TEN1Q86WV5 123 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 SMIM20Q8N5G0 67 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 LINC00612Q8N6U2 182 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 CARD19Q96LW7 228 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 Q9HAA7 133 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 H7C423 109 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 CCL18P55774 89 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 HERV-K104P63124 156 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 ANAPC13Q9BS18 74 aa4.16□□□□□ -1.74
TNFSF4-201ENST00000281834 KPRPQ5T749 579 aaPredicted RBP4.15□□□□□ -1.74
TNFSF4-201ENST00000281834 WFDC10BQ8IUB3 73 aa4.15□□□□□ -1.74
TNFSF4-201ENST00000281834 TRBV30A0A0K0K1B3 111 aa4.15□□□□□ -1.75
TNFSF4-201ENST00000281834 HIGD2BQ4VC39 106 aa4.15□□□□□ -1.75
TNFSF4-201ENST00000281834 LINC00337Q8N6G1 96 aa4.15□□□□□ -1.75
TNFSF4-201ENST00000281834 TIMM17BO60830 172 aa4.15□□□□□ -1.75
TNFSF4-201ENST00000281834 PPDPFLQ8WWR9 84 aa4.14□□□□□ -1.75
TNFSF4-201ENST00000281834 TENM2Q9NT68 2774 aa4.14□□□□□ -1.75
TNFSF4-201ENST00000281834 A0A1B0GUV1 79 aa4.14□□□□□ -1.75
TNFSF4-201ENST00000281834 SPAG11BQ08648 103 aa4.14□□□□□ -1.75
TNFSF4-201ENST00000281834 C10orf25Q5T742 122 aa4.14□□□□□ -1.75
TNFSF4-201ENST00000281834 UNQ6190/PRO20217Q6UXQ8 127 aa4.14□□□□□ -1.75
TNFSF4-201ENST00000281834 COPS9Q8WXC6 57 aa4.14□□□□□ -1.75
TNFSF4-201ENST00000281834 NCR3O14931 201 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 CD164L2Q6UWJ8 174 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 XAGE1AQ9HD64 81 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 IGKV2-28A0A075B6P5 120 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 DEFB131BA0A096LNP1 70 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 IGKV2D-28P01615 120 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 SLPIP03973 132 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 SHISA2Q6UWI4 295 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 LYPD5Q6UWN5 251 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 C11orf45Q8TAV5 145 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 FAM218AQ96MZ4 157 aa4.13□□□□□ -1.75
TNFSF4-201ENST00000281834 TRBV10-2A0A0K0K1G8 114 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 LST1O00453 97 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 LELP1Q5T871 98 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 FAM19A3Q7Z5A8 133 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 SMIM11BQ8TCY0 68 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 IGKV2D-24A0A075B6R9 120 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 IBA57-AS1B1ANH7 110 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 DNAL4O96015 105 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 MT-ATP8P03928 68 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 TTC32Q5I0X7 151 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 TRAV13-2A0A0B4J235 113 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 TRAV8-4A0A0B4J246 113 aa4.12□□□□□ -1.75
TNFSF4-201ENST00000281834 LECT2O14960 151 aa4.11□□□□□ -1.75
TNFSF4-201ENST00000281834 Q8IZM0 81 aa4.11□□□□□ -1.75
TNFSF4-201ENST00000281834 A0A087WYN8 130 aa4.11□□□□□ -1.75
TNFSF4-201ENST00000281834 BAALC-AS2P0C853 105 aa4.11□□□□□ -1.75
TNFSF4-201ENST00000281834 XGP55808 180 aa4.11□□□□□ -1.75
TNFSF4-201ENST00000281834 ESRGQ1W209 222 aa4.11□□□□□ -1.75
TNFSF4-201ENST00000281834 ENHOQ6UWT2 76 aa4.11□□□□□ -1.75
TNFSF4-201ENST00000281834 ZNF561-AS1K7EIQ3 104 aa4.1□□□□□ -1.75
TNFSF4-201ENST00000281834 GAGE2EQ4V326 116 aa4.1□□□□□ -1.75
TNFSF4-201ENST00000281834 S100A7L2Q5SY68 101 aa4.1□□□□□ -1.75
TNFSF4-201ENST00000281834 GAGE2DQ9UEU5 116 aa4.1□□□□□ -1.75
TNFSF4-201ENST00000281834 CSMD3Q7Z407 3707 aa4.1□□□□□ -1.75
TNFSF4-201ENST00000281834 RPL18AQ02543 176 aaKnown RBP4.1□□□□□ -1.75
TNFSF4-201ENST00000281834 KIAA0087Q14695 138 aa4.09□□□□□ -1.75
TNFSF4-201ENST00000281834 CDIP1Q9H305 208 aa4.09□□□□□ -1.75
TNFSF4-201ENST00000281834 C15orf53Q8NAA6 179 aa4.09□□□□□ -1.76
TNFSF4-201ENST00000281834 CAMK2N2Q96S95 79 aa4.09□□□□□ -1.76
TNFSF4-201ENST00000281834 C1orf43Q9BWL3 253 aa4.08□□□□□ -1.76
TNFSF4-201ENST00000281834 WIPF1O43516 503 aa4.08□□□□□ -1.76
TNFSF4-201ENST00000281834 SNCGO76070 127 aa4.08□□□□□ -1.76
TNFSF4-201ENST00000281834 Q8NDZ9 215 aa4.08□□□□□ -1.76
TNFSF4-201ENST00000281834 H3BT86 120 aa4.08□□□□□ -1.76
TNFSF4-201ENST00000281834 GAGE2AQ6NT46 116 aa4.08□□□□□ -1.76
TNFSF4-201ENST00000281834 SPATA25Q9BR10 227 aa4.08□□□□□ -1.76
TNFSF4-201ENST00000281834 C6orf99Q4VX62 202 aa4.07□□□□□ -1.76
TNFSF4-201ENST00000281834 EGFEM1PQ0D2K5 195 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms