RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 LINC00526Q96FQ7 95 aa12.31□□□□□ -0.44
CAPN1-201ENST00000279247 TRIAP1O43715 76 aa12.3□□□□□ -0.44
CAPN1-201ENST00000279247 KPRPQ5T749 579 aaPredicted RBP12.3□□□□□ -0.44
CAPN1-201ENST00000279247 TIMM17BO60830 172 aa12.3□□□□□ -0.44
CAPN1-201ENST00000279247 K7ERU9 68 aa12.29□□□□□ -0.44
CAPN1-201ENST00000279247 MALP21145 153 aa12.29□□□□□ -0.44
CAPN1-201ENST00000279247 LYRM7Q5U5X0 104 aa12.29□□□□□ -0.44
CAPN1-201ENST00000279247 F8W1H4 67 aa12.28□□□□□ -0.44
CAPN1-201ENST00000279247 HERV-K104P63124 156 aa12.28□□□□□ -0.44
CAPN1-201ENST00000279247 IFITM1P13164 125 aa12.28□□□□□ -0.44
CAPN1-201ENST00000279247 LYPD5Q6UWN5 251 aa12.27□□□□□ -0.44
CAPN1-201ENST00000279247 LELP1Q5T871 98 aa12.27□□□□□ -0.45
CAPN1-201ENST00000279247 CLEC2BQ92478 149 aa12.27□□□□□ -0.45
CAPN1-201ENST00000279247 PRO0461Q9UI25 63 aa12.27□□□□□ -0.45
CAPN1-201ENST00000279247 WFDC10BQ8IUB3 73 aa12.26□□□□□ -0.45
CAPN1-201ENST00000279247 UBE2WQ96B02 151 aa12.26□□□□□ -0.45
CAPN1-201ENST00000279247 C9JAW5 83 aa12.26□□□□□ -0.45
CAPN1-201ENST00000279247 COX7A2LO14548 114 aa12.26□□□□□ -0.45
CAPN1-201ENST00000279247 SMCPP49901 116 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-201ENST00000279247 C11orf45Q8TAV5 145 aa12.25□□□□□ -0.45
CAPN1-201ENST00000279247 CKS1BP61024 79 aa12.25□□□□□ -0.45
CAPN1-201ENST00000279247 COL7A1Q02388 2944 aa12.24□□□□□ -0.45
CAPN1-201ENST00000279247 DEFB131BA0A096LNP1 70 aa12.24□□□□□ -0.45
CAPN1-201ENST00000279247 C9orf116Q5BN46 136 aaPredicted RBP12.24□□□□□ -0.45
CAPN1-201ENST00000279247 GAGE12HA6NDE8 117 aa12.23□□□□□ -0.45
CAPN1-201ENST00000279247 CD164L2Q6UWJ8 174 aa12.23□□□□□ -0.45
CAPN1-201ENST00000279247 TRBV20-1A0A075B6N2 111 aa12.22□□□□□ -0.45
CAPN1-201ENST00000279247 CFAP161Q6P656 301 aa12.22□□□□□ -0.45
CAPN1-201ENST00000279247 SND1-IT1Q9HBX3 110 aa12.22□□□□□ -0.45
CAPN1-201ENST00000279247 C6orf223Q8N319 242 aa12.21□□□□□ -0.45
CAPN1-201ENST00000279247 K7EIL1 84 aa12.2□□□□□ -0.46
CAPN1-201ENST00000279247 CRPP02741 224 aa12.2□□□□□ -0.46
CAPN1-201ENST00000279247 STAB2Q8WWQ8 2551 aa12.2□□□□□ -0.46
CAPN1-201ENST00000279247 COX6CP09669 75 aa12.2□□□□□ -0.46
CAPN1-201ENST00000279247 CCL18P55774 89 aa12.19□□□□□ -0.46
CAPN1-201ENST00000279247 TRBV30A0A0K0K1B3 111 aa12.19□□□□□ -0.46
CAPN1-201ENST00000279247 ESRGQ1W209 222 aa12.19□□□□□ -0.46
CAPN1-201ENST00000279247 ENHOQ6UWT2 76 aa12.19□□□□□ -0.46
CAPN1-201ENST00000279247 SLC25A20O43772 301 aa12.18□□□□□ -0.46
CAPN1-201ENST00000279247 FOXI1Q12951 378 aa12.18□□□□□ -0.46
CAPN1-201ENST00000279247 ATXN8Q156A1 80 aa12.18□□□□□ -0.46
CAPN1-201ENST00000279247 Q8IZM0 81 aa12.18□□□□□ -0.46
CAPN1-201ENST00000279247 COPS9Q8WXC6 57 aa12.18□□□□□ -0.46
CAPN1-201ENST00000279247 HUWE1Q7Z6Z7 4374 aaKnown RBP12.18□□□□□ -0.46
CAPN1-201ENST00000279247 OR13C6PQ8NH95 151 aa12.17□□□□□ -0.46
CAPN1-201ENST00000279247 IBA57-AS1B1ANH7 110 aa12.17□□□□□ -0.46
CAPN1-201ENST00000279247 LINC00337Q8N6G1 96 aa12.16□□□□□ -0.46
CAPN1-201ENST00000279247 PRR3P79522 188 aaKnown RBP12.16□□□□□ -0.46
CAPN1-201ENST00000279247 LINC01620Q4KN68 170 aa12.16□□□□□ -0.46
CAPN1-201ENST00000279247 SPAG11BQ08648 103 aa12.15□□□□□ -0.46
CAPN1-201ENST00000279247 KIAA0087Q14695 138 aa12.15□□□□□ -0.46
CAPN1-201ENST00000279247 C10orf25Q5T742 122 aa12.15□□□□□ -0.46
CAPN1-201ENST00000279247 UNQ6190/PRO20217Q6UXQ8 127 aa12.15□□□□□ -0.46
CAPN1-201ENST00000279247 IGKV2-28A0A075B6P5 120 aa12.14□□□□□ -0.47
CAPN1-201ENST00000279247 IGKV2D-28P01615 120 aa12.14□□□□□ -0.47
CAPN1-201ENST00000279247 ANKRD29Q8N6D5 301 aa12.14□□□□□ -0.47
CAPN1-201ENST00000279247 HIGD2BQ4VC39 106 aa12.13□□□□□ -0.47
CAPN1-201ENST00000279247 Q9HAA7 133 aa12.13□□□□□ -0.47
CAPN1-201ENST00000279247 SPATA25Q9BR10 227 aa12.12□□□□□ -0.47
CAPN1-201ENST00000279247 CBY1Q9Y3M2 126 aa12.12□□□□□ -0.47
CAPN1-201ENST00000279247 PRR34Q9NV39 138 aa12.11□□□□□ -0.47
CAPN1-201ENST00000279247 C21orf62-AS1Q17RA5 79 aa12.09□□□□□ -0.47
CAPN1-201ENST00000279247 TEN1Q86WV5 123 aa12.09□□□□□ -0.47
CAPN1-201ENST00000279247 NTN5Q8WTR8 489 aaPredicted RBP12.09□□□□□ -0.47
CAPN1-201ENST00000279247 J3QR89 54 aa12.09□□□□□ -0.47
CAPN1-201ENST00000279247 MEGF8Q7Z7M0 2845 aa12.09□□□□□ -0.47
CAPN1-201ENST00000279247 TRAV13-2A0A0B4J235 113 aa12.08□□□□□ -0.47
CAPN1-201ENST00000279247 CARD19Q96LW7 228 aa12.08□□□□□ -0.47
CAPN1-201ENST00000279247 IGKV2D-24A0A075B6R9 120 aa12.08□□□□□ -0.48
CAPN1-201ENST00000279247 H3BNG1 76 aa12.07□□□□□ -0.48
CAPN1-201ENST00000279247 LST1O00453 97 aa12.07□□□□□ -0.48
CAPN1-201ENST00000279247 SMIM11BQ8TCY0 68 aa12.07□□□□□ -0.48
CAPN1-201ENST00000279247 PRKDCP78527 4128 aaKnown RBP12.07□□□□□ -0.48
CAPN1-201ENST00000279247 TEX49A0A1B0GTD5 131 aa12.06□□□□□ -0.48
CAPN1-201ENST00000279247 FAM218AQ96MZ4 157 aa12.06□□□□□ -0.48
CAPN1-201ENST00000279247 DNAH9Q9NYC9 4486 aa12.06□□□□□ -0.48
CAPN1-201ENST00000279247 LYSTQ99698 3801 aa12.05□□□□□ -0.48
CAPN1-201ENST00000279247 TENM2Q9NT68 2774 aa12.05□□□□□ -0.48
CAPN1-201ENST00000279247 NCR3O14931 201 aa12.05□□□□□ -0.48
CAPN1-201ENST00000279247 TM2D3Q9BRN9 247 aa12.05□□□□□ -0.48
CAPN1-201ENST00000279247 TRBV10-2A0A0K0K1G8 114 aa12.05□□□□□ -0.48
CAPN1-201ENST00000279247 XAGE1AQ9HD64 81 aa12.04□□□□□ -0.48
CAPN1-201ENST00000279247 CXCL5P42830 114 aa12.04□□□□□ -0.48
CAPN1-201ENST00000279247 PPDPFLQ8WWR9 84 aa12.04□□□□□ -0.48
CAPN1-201ENST00000279247 TRAV10A0A0B4J240 114 aa12.03□□□□□ -0.48
CAPN1-201ENST00000279247 LINC01561Q8N1V8 128 aa12.03□□□□□ -0.48
CAPN1-201ENST00000279247 C1orf43Q9BWL3 253 aa12.03□□□□□ -0.48
CAPN1-201ENST00000279247 ZNF561-AS1K7EIQ3 104 aa12.03□□□□□ -0.48
CAPN1-201ENST00000279247 KLK5Q9Y337 293 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-201ENST00000279247 TRAV8-4A0A0B4J246 113 aa12.02□□□□□ -0.49
CAPN1-201ENST00000279247 Q8NDZ9 215 aa12.02□□□□□ -0.49
CAPN1-201ENST00000279247 PCP4P48539 62 aa12.01□□□□□ -0.49
CAPN1-201ENST00000279247 CAMK2N2Q96S95 79 aa12□□□□□ -0.49
CAPN1-201ENST00000279247 LINC00588Q9Y4M8 146 aa12□□□□□ -0.49
CAPN1-201ENST00000279247 C6orf48Q9UBA6 75 aa11.99□□□□□ -0.49
CAPN1-201ENST00000279247 A0A1B0GV72 72 aa11.99□□□□□ -0.49
CAPN1-201ENST00000279247 A0A087WYN8 130 aa11.98□□□□□ -0.49
CAPN1-201ENST00000279247 RPL28P46779 137 aaKnown RBP11.98□□□□□ -0.49
CAPN1-201ENST00000279247 LINC01556Q5JQF7 62 aa11.97□□□□□ -0.49
CAPN1-201ENST00000279247 COX17Q14061 63 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms