RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 LINC00612Q8N6U2 182 aa12.95□□□□□ -0.34
SMARCC2-201ENST00000267064 IFITM1P13164 125 aa12.94□□□□□ -0.34
SMARCC2-201ENST00000267064 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
SMARCC2-201ENST00000267064 TCL1BO95988 128 aa12.94□□□□□ -0.34
SMARCC2-201ENST00000267064 WFDC10BQ8IUB3 73 aa12.94□□□□□ -0.34
SMARCC2-201ENST00000267064 IGHV3OR16-9A0A0B4J2B5 98 aa12.93□□□□□ -0.34
SMARCC2-201ENST00000267064 HIGD2BQ4VC39 106 aa12.93□□□□□ -0.34
SMARCC2-201ENST00000267064 EIF4EBP3O60516 100 aaPredicted RBP12.93□□□□□ -0.34
SMARCC2-201ENST00000267064 CLEC2BQ92478 149 aa12.93□□□□□ -0.34
SMARCC2-201ENST00000267064 SPATA25Q9BR10 227 aa12.93□□□□□ -0.34
SMARCC2-201ENST00000267064 SPAG11BQ08648 103 aa12.93□□□□□ -0.34
SMARCC2-201ENST00000267064 ZNF561-AS1K7EIQ3 104 aa12.92□□□□□ -0.34
SMARCC2-201ENST00000267064 IGLV5-45A0A087WSX0 123 aa12.92□□□□□ -0.34
SMARCC2-201ENST00000267064 IGLV5-39A0A0G2JS06 123 aa12.92□□□□□ -0.34
SMARCC2-201ENST00000267064 LYPD5Q6UWN5 251 aa12.92□□□□□ -0.34
SMARCC2-201ENST00000267064 A0A087WZ39 114 aa12.91□□□□□ -0.34
SMARCC2-201ENST00000267064 C9orf116Q5BN46 136 aaPredicted RBP12.91□□□□□ -0.34
SMARCC2-201ENST00000267064 A0A1B0GUV1 79 aa12.9□□□□□ -0.34
SMARCC2-201ENST00000267064 A0A1B0GV72 72 aa12.9□□□□□ -0.34
SMARCC2-201ENST00000267064 ATXN8Q156A1 80 aa12.9□□□□□ -0.34
SMARCC2-201ENST00000267064 CD164L2Q6UWJ8 174 aa12.9□□□□□ -0.34
SMARCC2-201ENST00000267064 A0A0B4J2C4 111 aa12.89□□□□□ -0.35
SMARCC2-201ENST00000267064 F8W1H4 67 aa12.89□□□□□ -0.35
SMARCC2-201ENST00000267064 SPANXDQ9BXN6 97 aa12.89□□□□□ -0.35
SMARCC2-201ENST00000267064 SPANXCQ9NY87 97 aa12.89□□□□□ -0.35
SMARCC2-201ENST00000267064 TRBV20-1A0A075B6N2 111 aa12.89□□□□□ -0.35
SMARCC2-201ENST00000267064 C1orf43Q9BWL3 253 aa12.89□□□□□ -0.35
SMARCC2-201ENST00000267064 TRIAP1O43715 76 aa12.88□□□□□ -0.35
SMARCC2-201ENST00000267064 UBE2DNLQ8IWF7 75 aa12.87□□□□□ -0.35
SMARCC2-201ENST00000267064 CBY1Q9Y3M2 126 aa12.87□□□□□ -0.35
SMARCC2-201ENST00000267064 LITAFQ99732 161 aa12.86□□□□□ -0.35
SMARCC2-201ENST00000267064 TENM3Q9P273 2699 aa12.86□□□□□ -0.35
SMARCC2-201ENST00000267064 SLC25A20O43772 301 aa12.86□□□□□ -0.35
SMARCC2-201ENST00000267064 S100A7L2Q5SY68 101 aa12.86□□□□□ -0.35
SMARCC2-201ENST00000267064 C6orf223Q8N319 242 aa12.86□□□□□ -0.35
SMARCC2-201ENST00000267064 DNAL4O96015 105 aa12.85□□□□□ -0.35
SMARCC2-201ENST00000267064 C21orf62-AS1Q17RA5 79 aa12.85□□□□□ -0.35
SMARCC2-201ENST00000267064 MDFIQ99750 246 aa12.84□□□□□ -0.35
SMARCC2-201ENST00000267064 TIMM17BO60830 172 aa12.84□□□□□ -0.35
SMARCC2-201ENST00000267064 CCL18P55774 89 aa12.84□□□□□ -0.35
SMARCC2-201ENST00000267064 CAMK2N2Q96S95 79 aa12.84□□□□□ -0.35
SMARCC2-201ENST00000267064 EGFEM1PQ0D2K5 195 aa12.83□□□□□ -0.35
SMARCC2-201ENST00000267064 ESRGQ1W209 222 aa12.83□□□□□ -0.35
SMARCC2-201ENST00000267064 SOSTDC1Q6X4U4 206 aa12.83□□□□□ -0.35
SMARCC2-201ENST00000267064 WIPF1O43516 503 aa12.83□□□□□ -0.36
SMARCC2-201ENST00000267064 UNQ6190/PRO20217Q6UXQ8 127 aa12.83□□□□□ -0.36
SMARCC2-201ENST00000267064 K7EIL1 84 aa12.82□□□□□ -0.36
SMARCC2-201ENST00000267064 PRR3P79522 188 aaKnown RBP12.82□□□□□ -0.36
SMARCC2-201ENST00000267064 IBA57-AS1B1ANH7 110 aa12.82□□□□□ -0.36
SMARCC2-201ENST00000267064 TRAV13-2A0A0B4J235 113 aa12.81□□□□□ -0.36
SMARCC2-201ENST00000267064 XAGE1AQ9HD64 81 aa12.81□□□□□ -0.36
SMARCC2-201ENST00000267064 TRAV10A0A0B4J240 114 aa12.81□□□□□ -0.36
SMARCC2-201ENST00000267064 GAGE2EQ4V326 116 aa12.81□□□□□ -0.36
SMARCC2-201ENST00000267064 GAGE2DQ9UEU5 116 aa12.81□□□□□ -0.36
SMARCC2-201ENST00000267064 NCR3O14931 201 aa12.81□□□□□ -0.36
SMARCC2-201ENST00000267064 LINC01620Q4KN68 170 aa12.81□□□□□ -0.36
SMARCC2-201ENST00000267064 NTN5Q8WTR8 489 aaPredicted RBP12.8□□□□□ -0.36
SMARCC2-201ENST00000267064 CARD19Q96LW7 228 aa12.79□□□□□ -0.36
SMARCC2-201ENST00000267064 LECT2O14960 151 aa12.79□□□□□ -0.36
SMARCC2-201ENST00000267064 Q8IZM0 81 aa12.78□□□□□ -0.36
SMARCC2-201ENST00000267064 STAB2Q8WWQ8 2551 aa12.77□□□□□ -0.37
SMARCC2-201ENST00000267064 ANKRD29Q8N6D5 301 aa12.76□□□□□ -0.37
SMARCC2-201ENST00000267064 PSCAO43653 123 aa12.75□□□□□ -0.37
SMARCC2-201ENST00000267064 ENHOQ6UWT2 76 aa12.74□□□□□ -0.37
SMARCC2-201ENST00000267064 CXCL5P42830 114 aa12.74□□□□□ -0.37
SMARCC2-201ENST00000267064 TRBV30A0A0K0K1B3 111 aa12.74□□□□□ -0.37
SMARCC2-201ENST00000267064 C10orf25Q5T742 122 aa12.73□□□□□ -0.37
SMARCC2-201ENST00000267064 SNCGO76070 127 aa12.73□□□□□ -0.37
SMARCC2-201ENST00000267064 FAM19A3Q7Z5A8 133 aa12.73□□□□□ -0.37
SMARCC2-201ENST00000267064 RPL18AQ02543 176 aaKnown RBP12.72□□□□□ -0.37
SMARCC2-201ENST00000267064 TRAV8-4A0A0B4J246 113 aa12.71□□□□□ -0.37
SMARCC2-201ENST00000267064 FOXI1Q12951 378 aa12.71□□□□□ -0.37
SMARCC2-201ENST00000267064 LINC00337Q8N6G1 96 aa12.71□□□□□ -0.37
SMARCC2-201ENST00000267064 PPDPFLQ8WWR9 84 aa12.7□□□□□ -0.38
SMARCC2-201ENST00000267064 TEN1Q86WV5 123 aa12.7□□□□□ -0.38
SMARCC2-201ENST00000267064 PCP4P48539 62 aa12.69□□□□□ -0.38
SMARCC2-201ENST00000267064 SMIM11BQ8TCY0 68 aa12.68□□□□□ -0.38
SMARCC2-201ENST00000267064 TEX49A0A1B0GTD5 131 aa12.67□□□□□ -0.38
SMARCC2-201ENST00000267064 BAALC-AS2P0C853 105 aa12.67□□□□□ -0.38
SMARCC2-201ENST00000267064 C15orf53Q8NAA6 179 aa12.67□□□□□ -0.38
SMARCC2-201ENST00000267064 TRBV10-2A0A0K0K1G8 114 aa12.66□□□□□ -0.38
SMARCC2-201ENST00000267064 SMCPP49901 116 aaPredicted RBP12.66□□□□□ -0.38
SMARCC2-201ENST00000267064 SLPIP03973 132 aa12.66□□□□□ -0.38
SMARCC2-201ENST00000267064 DPH3Q96FX2 82 aa12.65□□□□□ -0.38
SMARCC2-201ENST00000267064 LST1O00453 97 aa12.63□□□□□ -0.39
SMARCC2-201ENST00000267064 H3BNG1 76 aa12.62□□□□□ -0.39
SMARCC2-201ENST00000267064 PRO0461Q9UI25 63 aa12.62□□□□□ -0.39
SMARCC2-201ENST00000267064 LINC00588Q9Y4M8 146 aa12.62□□□□□ -0.39
SMARCC2-201ENST00000267064 KLK5Q9Y337 293 aaPredicted RBP12.62□□□□□ -0.39
SMARCC2-201ENST00000267064 GAGE2BQ13066 116 aa12.62□□□□□ -0.39
SMARCC2-201ENST00000267064 KIAA0087Q14695 138 aa12.62□□□□□ -0.39
SMARCC2-201ENST00000267064 TMEM126AQ9H061 195 aa12.62□□□□□ -0.39
SMARCC2-201ENST00000267064 IGKV2-28A0A075B6P5 120 aa12.61□□□□□ -0.39
SMARCC2-201ENST00000267064 IGKV2D-28P01615 120 aa12.61□□□□□ -0.39
SMARCC2-201ENST00000267064 TM2D3Q9BRN9 247 aa12.6□□□□□ -0.39
SMARCC2-201ENST00000267064 C6orf99Q4VX62 202 aa12.6□□□□□ -0.39
SMARCC2-201ENST00000267064 RMI2Q96E14 147 aa12.6□□□□□ -0.39
SMARCC2-201ENST00000267064 SYCNQ0VAF6 134 aa12.6□□□□□ -0.39
SMARCC2-201ENST00000267064 Q6ZRU5 148 aa12.6□□□□□ -0.39
SMARCC2-201ENST00000267064 PRR34Q9NV39 138 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms