RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 PRORYQ9H606 182 aa10.8□□□□□ -0.68
CASC3-201ENST00000264645 IGLV5-39A0A0G2JS06 123 aa10.79□□□□□ -0.68
CASC3-201ENST00000264645 C9orf116Q5BN46 136 aaPredicted RBP10.79□□□□□ -0.68
CASC3-201ENST00000264645 FAM19A4Q96LR4 140 aa10.78□□□□□ -0.68
CASC3-201ENST00000264645 ATP5EP56381 51 aaPredicted RBP10.78□□□□□ -0.68
CASC3-201ENST00000264645 A0A1W2PPR1 153 aa10.78□□□□□ -0.68
CASC3-201ENST00000264645 WFDC10AQ9H1F0 79 aa10.78□□□□□ -0.68
CASC3-201ENST00000264645 DEFB135Q30KP9 77 aa10.77□□□□□ -0.68
CASC3-201ENST00000264645 C1orf158Q8N1D5 194 aa10.77□□□□□ -0.69
CASC3-201ENST00000264645 AVPP01185 164 aa10.77□□□□□ -0.69
CASC3-201ENST00000264645 DEFB121Q5J5C9 76 aa10.77□□□□□ -0.69
CASC3-201ENST00000264645 PRO0628Q9UI54 55 aa10.76□□□□□ -0.69
CASC3-201ENST00000264645 A8MTW9 85 aa10.76□□□□□ -0.69
CASC3-201ENST00000264645 CELA1Q9UNI1 258 aa10.76□□□□□ -0.69
CASC3-201ENST00000264645 PCSK5Q92824 1860 aa10.76□□□□□ -0.69
CASC3-201ENST00000264645 F8P00451 2351 aa10.75□□□□□ -0.69
CASC3-201ENST00000264645 A0A087WZ39 114 aa10.75□□□□□ -0.69
CASC3-201ENST00000264645 APOC4P55056 127 aa10.75□□□□□ -0.69
CASC3-201ENST00000264645 ZNF843Q8N446 348 aa10.74□□□□□ -0.69
CASC3-201ENST00000264645 Q8IZM0 81 aa10.73□□□□□ -0.69
CASC3-201ENST00000264645 CDK2AP2O75956 126 aa10.73□□□□□ -0.69
CASC3-201ENST00000264645 CD164L2Q6UWJ8 174 aa10.73□□□□□ -0.69
CASC3-201ENST00000264645 Q6ZVQ6 151 aa10.73□□□□□ -0.69
CASC3-201ENST00000264645 BBC3Q96PG8 261 aaPredicted RBP10.73□□□□□ -0.69
CASC3-201ENST00000264645 FRYQ5TBA9 3013 aa10.73□□□□□ -0.69
CASC3-201ENST00000264645 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
CASC3-201ENST00000264645 ACANP16112 2415 aa10.72□□□□□ -0.69
CASC3-201ENST00000264645 LINC01547P58512 204 aaPredicted RBP10.72□□□□□ -0.69
CASC3-201ENST00000264645 SPEGQ15772 3267 aa10.71□□□□□ -0.69
CASC3-201ENST00000264645 TRBV7-6A0A0J9YX20 115 aa10.71□□□□□ -0.69
CASC3-201ENST00000264645 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.71□□□□□ -0.69
CASC3-201ENST00000264645 SPART-AS1P0CW21 52 aa10.71□□□□□ -0.7
CASC3-201ENST00000264645 FHL2Q14192 279 aa10.71□□□□□ -0.7
CASC3-201ENST00000264645 BEAN1Q3B7T3 259 aa10.7□□□□□ -0.7
CASC3-201ENST00000264645 UNQ6190/PRO20217Q6UXQ8 127 aa10.7□□□□□ -0.7
CASC3-201ENST00000264645 ZNF575Q86XF7 245 aa10.7□□□□□ -0.7
CASC3-201ENST00000264645 MRPL55Q7Z7F7 128 aaKnown RBP10.7□□□□□ -0.7
CASC3-201ENST00000264645 Q6YL49 198 aa10.7□□□□□ -0.7
CASC3-201ENST00000264645 ZNF702PQ9H963 129 aa10.7□□□□□ -0.7
CASC3-201ENST00000264645 FAM30AQ9NZY2 134 aa10.7□□□□□ -0.7
CASC3-201ENST00000264645 TMEM254Q8TBM7 123 aa10.69□□□□□ -0.7
CASC3-201ENST00000264645 IGLV5-45A0A087WSX0 123 aa10.69□□□□□ -0.7
CASC3-201ENST00000264645 MGAQ8IWI9 3026 aa10.68□□□□□ -0.7
CASC3-201ENST00000264645 MAP1AP78559 2803 aaPredicted RBP10.68□□□□□ -0.7
CASC3-201ENST00000264645 ZNF73O43830 326 aaPredicted RBP10.68□□□□□ -0.7
CASC3-201ENST00000264645 PSCAO43653 123 aa10.68□□□□□ -0.7
CASC3-201ENST00000264645 NDUFS5O43920 106 aa10.68□□□□□ -0.7
CASC3-201ENST00000264645 LINC01561Q8N1V8 128 aa10.67□□□□□ -0.7
CASC3-201ENST00000264645 CYSRT1A8MQ03 144 aa10.66□□□□□ -0.7
CASC3-201ENST00000264645 Q8N9L7 120 aa10.66□□□□□ -0.7
CASC3-201ENST00000264645 TRBV10-3A0A0K0K1G6 114 aa10.65□□□□□ -0.7
CASC3-201ENST00000264645 PRYO14603 147 aa10.65□□□□□ -0.7
CASC3-201ENST00000264645 NANOS2P60321 138 aaKnown RBP10.65□□□□□ -0.7
CASC3-201ENST00000264645 COX17Q14061 63 aa10.65□□□□□ -0.7
CASC3-201ENST00000264645 FASNP49327 2511 aaKnown RBP10.65□□□□□ -0.7
CASC3-201ENST00000264645 FRYLO94915 3013 aa10.65□□□□□ -0.7
CASC3-201ENST00000264645 IGKV2-28A0A075B6P5 120 aa10.65□□□□□ -0.7
CASC3-201ENST00000264645 IGKV2D-28P01615 120 aa10.65□□□□□ -0.7
CASC3-201ENST00000264645 BRI3O95415 125 aa10.65□□□□□ -0.7
CASC3-201ENST00000264645 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.65□□□□□ -0.7
CASC3-201ENST00000264645 PRO3102Q9H379 93 aa10.65□□□□□ -0.7
CASC3-201ENST00000264645 IGHV3OR16-9A0A0B4J2B5 98 aa10.65□□□□□ -0.71
CASC3-201ENST00000264645 PSPHP1O15172 72 aa10.64□□□□□ -0.71
CASC3-201ENST00000264645 C11orf72Q8NBR9 251 aa10.64□□□□□ -0.71
CASC3-201ENST00000264645 PLA2G2AP14555 144 aa10.64□□□□□ -0.71
CASC3-201ENST00000264645 LINC00575Q6W349 94 aa10.63□□□□□ -0.71
CASC3-201ENST00000264645 WFDC10BQ8IUB3 73 aa10.63□□□□□ -0.71
CASC3-201ENST00000264645 WFDC13Q8IUB5 93 aa10.63□□□□□ -0.71
CASC3-201ENST00000264645 LINC01006Q8NI28 216 aa10.62□□□□□ -0.71
CASC3-201ENST00000264645 MUC7Q8TAX7 377 aa10.62□□□□□ -0.71
CASC3-201ENST00000264645 EPG5Q9HCE0 2579 aa10.62□□□□□ -0.71
CASC3-201ENST00000264645 DNAJC9-AS1A6NH13 148 aa10.61□□□□□ -0.71
CASC3-201ENST00000264645 DEFB113Q30KQ7 82 aa10.61□□□□□ -0.71
CASC3-201ENST00000264645 ANKRD17O75179 2603 aaKnown RBP10.61□□□□□ -0.71
CASC3-201ENST00000264645 COL27A1Q8IZC6 1860 aaPredicted RBP10.6□□□□□ -0.71
CASC3-201ENST00000264645 CENPEQ02224 2701 aa10.6□□□□□ -0.71
CASC3-201ENST00000264645 LINC00482Q8N8I6 264 aa10.6□□□□□ -0.71
CASC3-201ENST00000264645 TRAV10A0A0B4J240 114 aa10.6□□□□□ -0.71
CASC3-201ENST00000264645 PMAIP1Q13794 54 aa10.6□□□□□ -0.71
CASC3-201ENST00000264645 ESRGQ1W209 222 aa10.59□□□□□ -0.71
CASC3-201ENST00000264645 CHKB-CPT1BH3BT56 60 aa10.59□□□□□ -0.71
CASC3-201ENST00000264645 C6orf223Q8N319 242 aa10.59□□□□□ -0.71
CASC3-201ENST00000264645 USP34Q70CQ2 3546 aa10.58□□□□□ -0.72
CASC3-201ENST00000264645 H0Y9J4 135 aa10.58□□□□□ -0.72
CASC3-201ENST00000264645 HIGD2AQ9BW72 106 aa10.57□□□□□ -0.72
CASC3-201ENST00000264645 A0A096LNI7 61 aa10.57□□□□□ -0.72
CASC3-201ENST00000264645 M0R378 163 aa10.57□□□□□ -0.72
CASC3-201ENST00000264645 LINC00336Q6ZUF6 198 aa10.57□□□□□ -0.72
CASC3-201ENST00000264645 NDUFB1O75438 58 aa10.56□□□□□ -0.72
CASC3-201ENST00000264645 IGHV4-31P0DP07 118 aa10.56□□□□□ -0.72
CASC3-201ENST00000264645 C9orf129Q5T035 196 aaKnown RBP10.56□□□□□ -0.72
CASC3-201ENST00000264645 TM2D3Q9BRN9 247 aa10.56□□□□□ -0.72
CASC3-201ENST00000264645 A6NED7 52 aa10.56□□□□□ -0.72
CASC3-201ENST00000264645 SEC61GP60059 68 aa10.56□□□□□ -0.72
CASC3-201ENST00000264645 SZT2Q5T011 3432 aa10.56□□□□□ -0.72
CASC3-201ENST00000264645 A0A0J9YWU9 116 aa10.56□□□□□ -0.72
CASC3-201ENST00000264645 LYRM9A8MSI8 78 aa10.55□□□□□ -0.72
CASC3-201ENST00000264645 UBE2DNLQ8IWF7 75 aa10.55□□□□□ -0.72
CASC3-201ENST00000264645 CXCL6P80162 114 aa10.55□□□□□ -0.72
CASC3-201ENST00000264645 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms