RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 NBDYA0A0U1RRE5 68 aa5.69□□□□□ -1.5
GTF3C3-201ENST00000263956 LINC01546A6NGU7 62 aa5.69□□□□□ -1.5
GTF3C3-201ENST00000263956 CDPF1Q6NVV7 123 aa5.69□□□□□ -1.5
GTF3C3-201ENST00000263956 LOC107984640A0A0U1RRK4 108 aa5.69□□□□□ -1.5
GTF3C3-201ENST00000263956 ETDCA0A1B0GVM5 59 aa5.69□□□□□ -1.5
GTF3C3-201ENST00000263956 COX6A2Q02221 97 aa5.68□□□□□ -1.5
GTF3C3-201ENST00000263956 PDZD2O15018 2839 aa5.68□□□□□ -1.5
GTF3C3-201ENST00000263956 SMIM1B2RUZ4 78 aa5.68□□□□□ -1.5
GTF3C3-201ENST00000263956 LINC01561Q8N1V8 128 aa5.68□□□□□ -1.5
GTF3C3-201ENST00000263956 C6orf223Q8N319 242 aa5.68□□□□□ -1.5
GTF3C3-201ENST00000263956 A4D1N5 150 aa5.68□□□□□ -1.5
GTF3C3-201ENST00000263956 BVES-AS1Q5T3Y7 98 aa5.68□□□□□ -1.5
GTF3C3-201ENST00000263956 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
GTF3C3-201ENST00000263956 F8WDY8 70 aa5.67□□□□□ -1.5
GTF3C3-201ENST00000263956 ATXN8Q156A1 80 aa5.67□□□□□ -1.5
GTF3C3-201ENST00000263956 XAGE1AQ9HD64 81 aa5.67□□□□□ -1.5
GTF3C3-201ENST00000263956 UNQ6190/PRO20217Q6UXQ8 127 aa5.67□□□□□ -1.5
GTF3C3-201ENST00000263956 IGKV2D-26A0A0A0MRZ7 120 aa5.67□□□□□ -1.5
GTF3C3-201ENST00000263956 F8WEM9 126 aa5.67□□□□□ -1.5
GTF3C3-201ENST00000263956 NCR3O14931 201 aa5.67□□□□□ -1.5
GTF3C3-201ENST00000263956 NAA38Q9BRA0 125 aaKnown RBP5.67□□□□□ -1.5
GTF3C3-201ENST00000263956 LINC00474Q9P2X8 69 aa5.66□□□□□ -1.5
GTF3C3-201ENST00000263956 TRBV30A0A0K0K1B3 111 aa5.66□□□□□ -1.5
GTF3C3-201ENST00000263956 C2orf48Q96LS8 159 aa5.66□□□□□ -1.5
GTF3C3-201ENST00000263956 TMEM126AQ9H061 195 aa5.66□□□□□ -1.5
GTF3C3-201ENST00000263956 IGLV5-52A0A0A0MRZ9 124 aa5.66□□□□□ -1.5
GTF3C3-201ENST00000263956 SPANXCQ9NY87 97 aa5.66□□□□□ -1.5
GTF3C3-201ENST00000263956 TIMM17BO60830 172 aa5.65□□□□□ -1.5
GTF3C3-201ENST00000263956 APLNQ9ULZ1 77 aa5.65□□□□□ -1.5
GTF3C3-201ENST00000263956 ZFHX4Q86UP3 3567 aa5.65□□□□□ -1.5
GTF3C3-201ENST00000263956 CFC1BP0CG36 223 aa5.65□□□□□ -1.5
GTF3C3-201ENST00000263956 CFC1P0CG37 223 aa5.65□□□□□ -1.5
GTF3C3-201ENST00000263956 COX17Q14061 63 aa5.65□□□□□ -1.5
GTF3C3-201ENST00000263956 MAPKAPK5-AS1Q8N8E1 139 aa5.65□□□□□ -1.5
GTF3C3-201ENST00000263956 IGHV3OR16-9A0A0B4J2B5 98 aa5.65□□□□□ -1.51
GTF3C3-201ENST00000263956 UBE2AP49459 152 aa5.65□□□□□ -1.51
GTF3C3-201ENST00000263956 Q8N3U1 123 aa5.65□□□□□ -1.51
GTF3C3-201ENST00000263956 NIPBLQ6KC79 2804 aaeCLIP5.65□□□□□ -1.51
GTF3C3-201ENST00000263956 FAM19A5Q7Z5A7 132 aaPredicted RBP5.64□□□□□ -1.51
GTF3C3-201ENST00000263956 TSPAN13O95857 204 aa5.64□□□□□ -1.51
GTF3C3-201ENST00000263956 C7orf33Q8WU49 177 aa5.64□□□□□ -1.51
GTF3C3-201ENST00000263956 LAMTOR3Q9UHA4 124 aa5.64□□□□□ -1.51
GTF3C3-201ENST00000263956 ZNF575Q86XF7 245 aa5.64□□□□□ -1.51
GTF3C3-201ENST00000263956 LINC00308Q8TCZ7 52 aa5.64□□□□□ -1.51
GTF3C3-201ENST00000263956 NBEAL1Q6ZS30 2694 aa5.64□□□□□ -1.51
GTF3C3-201ENST00000263956 A0A1B0GWB2 263 aa5.63□□□□□ -1.51
GTF3C3-201ENST00000263956 ENHOQ6UWT2 76 aa5.63□□□□□ -1.51
GTF3C3-201ENST00000263956 SNHG12Q9BXW3 62 aa5.63□□□□□ -1.51
GTF3C3-201ENST00000263956 K7ERJ3 54 aa5.63□□□□□ -1.51
GTF3C3-201ENST00000263956 DIRC1Q969H9 104 aa5.63□□□□□ -1.51
GTF3C3-201ENST00000263956 SPANXB1Q9NS25 103 aaPredicted RBP5.63□□□□□ -1.51
GTF3C3-201ENST00000263956 TRBV20-1A0A075B6N2 111 aa5.62□□□□□ -1.51
GTF3C3-201ENST00000263956 H0YGX0 51 aa5.62□□□□□ -1.51
GTF3C3-201ENST00000263956 FXYD2P54710 66 aa5.62□□□□□ -1.51
GTF3C3-201ENST00000263956 UPK3BQ9BT76 320 aa5.62□□□□□ -1.51
GTF3C3-201ENST00000263956 SPANXDQ9BXN6 97 aa5.62□□□□□ -1.51
GTF3C3-201ENST00000263956 C9orf118A6NHY6 69 aa5.61□□□□□ -1.51
GTF3C3-201ENST00000263956 FOXI1Q12951 378 aa5.61□□□□□ -1.51
GTF3C3-201ENST00000263956 C9orf116Q5BN46 136 aaPredicted RBP5.61□□□□□ -1.51
GTF3C3-201ENST00000263956 A0A1B0GV90 55 aa5.6□□□□□ -1.51
GTF3C3-201ENST00000263956 Q6ZRU5 148 aa5.6□□□□□ -1.51
GTF3C3-201ENST00000263956 NDUFC2-KCTD14E9PQ53 114 aa5.6□□□□□ -1.51
GTF3C3-201ENST00000263956 M0R378 163 aa5.6□□□□□ -1.51
GTF3C3-201ENST00000263956 IGLV5-45A0A087WSX0 123 aa5.6□□□□□ -1.51
GTF3C3-201ENST00000263956 IGLV5-39A0A0G2JS06 123 aa5.6□□□□□ -1.51
GTF3C3-201ENST00000263956 VPS25Q9BRG1 176 aa5.6□□□□□ -1.51
GTF3C3-201ENST00000263956 C9JAW5 83 aa5.59□□□□□ -1.51
GTF3C3-201ENST00000263956 PRR34Q9NV39 138 aa5.59□□□□□ -1.51
GTF3C3-201ENST00000263956 COX7BP24311 80 aa5.59□□□□□ -1.52
GTF3C3-201ENST00000263956 TSPEAR-AS2P59090 65 aa5.59□□□□□ -1.52
GTF3C3-201ENST00000263956 TP73-AS1Q9UF72 201 aa5.58□□□□□ -1.52
GTF3C3-201ENST00000263956 OTOGQ6ZRI0 2925 aa5.58□□□□□ -1.52
GTF3C3-201ENST00000263956 A0A0B4J2C4 111 aa5.58□□□□□ -1.52
GTF3C3-201ENST00000263956 RNF151Q2KHN1 245 aa5.58□□□□□ -1.52
GTF3C3-201ENST00000263956 CASC10Q5T4H9 136 aa5.58□□□□□ -1.52
GTF3C3-201ENST00000263956 FAM19A1Q7Z5A9 133 aa5.58□□□□□ -1.52
GTF3C3-201ENST00000263956 DEFB105AQ8NG35 78 aa5.58□□□□□ -1.52
GTF3C3-201ENST00000263956 NF1P21359 2839 aa5.58□□□□□ -1.52
GTF3C3-201ENST00000263956 NTN5Q8WTR8 489 aaPredicted RBP5.57□□□□□ -1.52
GTF3C3-201ENST00000263956 HIGD2AQ9BW72 106 aa5.57□□□□□ -1.52
GTF3C3-201ENST00000263956 K7ERU9 68 aa5.57□□□□□ -1.52
GTF3C3-201ENST00000263956 SMG1Q96Q15 3661 aaKnown RBP5.56□□□□□ -1.52
GTF3C3-201ENST00000263956 A0A1B0GV72 72 aa5.56□□□□□ -1.52
GTF3C3-201ENST00000263956 A0A1W2PPM0 123 aa5.56□□□□□ -1.52
GTF3C3-201ENST00000263956 M0QXV9 152 aa5.56□□□□□ -1.52
GTF3C3-201ENST00000263956 LINC00476Q8WZB0 136 aa5.56□□□□□ -1.52
GTF3C3-201ENST00000263956 MXRA5Q9NR99 2828 aa5.56□□□□□ -1.52
GTF3C3-201ENST00000263956 IGKV2-28A0A075B6P5 120 aa5.56□□□□□ -1.52
GTF3C3-201ENST00000263956 IGKV2D-28P01615 120 aa5.56□□□□□ -1.52
GTF3C3-201ENST00000263956 GVQW2A0A096LPI5 108 aaPredicted RBP5.56□□□□□ -1.52
GTF3C3-201ENST00000263956 ORMDL1Q9P0S3 153 aa5.56□□□□□ -1.52
GTF3C3-201ENST00000263956 TRAV23DV6A0A075B6W5 121 aa5.55□□□□□ -1.52
GTF3C3-201ENST00000263956 RPL37AP8A6NKH3 93 aa5.54□□□□□ -1.52
GTF3C3-201ENST00000263956 H3BQ85 93 aa5.54□□□□□ -1.52
GTF3C3-201ENST00000263956 RTL8CO15255 209 aa5.54□□□□□ -1.52
GTF3C3-201ENST00000263956 C2orf91Q6ZV80 131 aa5.54□□□□□ -1.52
GTF3C3-201ENST00000263956 C6orf99Q4VX62 202 aa5.54□□□□□ -1.52
GTF3C3-201ENST00000263956 C6orf48Q9UBA6 75 aa5.54□□□□□ -1.52
GTF3C3-201ENST00000263956 FAM19A3Q7Z5A8 133 aa5.54□□□□□ -1.52
GTF3C3-201ENST00000263956 NBEAL2Q6ZNJ1 2754 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms