RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 FAM240AA0A1B0GVK7 77 aa8.94□□□□□ -0.98
LIG1-201ENST00000263274 DEFB4AO15263 64 aa8.94□□□□□ -0.98
LIG1-201ENST00000263274 LINC00526Q96FQ7 95 aa8.94□□□□□ -0.98
LIG1-201ENST00000263274 C16orf74Q96GX8 76 aa8.94□□□□□ -0.98
LIG1-201ENST00000263274 LINC00337Q8N6G1 96 aa8.93□□□□□ -0.98
LIG1-201ENST00000263274 LRRC75A-AS1Q8N1F1 130 aa8.93□□□□□ -0.98
LIG1-201ENST00000263274 SMCR5Q8TEV8 140 aa8.93□□□□□ -0.98
LIG1-201ENST00000263274 IGLV10-54A0A075B6I4 117 aa8.93□□□□□ -0.98
LIG1-201ENST00000263274 TRACP01848 142 aa8.93□□□□□ -0.98
LIG1-201ENST00000263274 LINC00643Q86TS7 51 aa8.92□□□□□ -0.98
LIG1-201ENST00000263274 LINC01006Q8NI28 216 aa8.92□□□□□ -0.98
LIG1-201ENST00000263274 LECT2O14960 151 aa8.92□□□□□ -0.98
LIG1-201ENST00000263274 MRAPQ8TCY5 172 aa8.92□□□□□ -0.98
LIG1-201ENST00000263274 ZNF469Q96JG9 3925 aaPredicted RBP8.92□□□□□ -0.98
LIG1-201ENST00000263274 GYPEP15421 78 aa8.92□□□□□ -0.98
LIG1-201ENST00000263274 COX7CP15954 63 aa8.92□□□□□ -0.98
LIG1-201ENST00000263274 DSCR8Q96T75 97 aa8.92□□□□□ -0.98
LIG1-201ENST00000263274 C14orf132Q9NPU4 83 aa8.92□□□□□ -0.98
LIG1-201ENST00000263274 TRBV6-8A0A0A6YYG3 113 aa8.91□□□□□ -0.98
LIG1-201ENST00000263274 PF4P02776 101 aa8.91□□□□□ -0.98
LIG1-201ENST00000263274 SMIM11BQ8TCY0 68 aa8.91□□□□□ -0.98
LIG1-201ENST00000263274 CCL18P55774 89 aa8.91□□□□□ -0.98
LIG1-201ENST00000263274 IMUPQ9GZP8 106 aa8.91□□□□□ -0.98
LIG1-201ENST00000263274 A0A087WYN8 130 aa8.9□□□□□ -0.98
LIG1-201ENST00000263274 ACYP1P07311 99 aa8.9□□□□□ -0.98
LIG1-201ENST00000263274 GIG44P09565 113 aaPredicted RBP8.9□□□□□ -0.98
LIG1-201ENST00000263274 MALP21145 153 aa8.9□□□□□ -0.98
LIG1-201ENST00000263274 SDIM1Q6ZPB5 146 aa8.9□□□□□ -0.98
LIG1-201ENST00000263274 IGKV3D-7A0A0C4DH55 119 aa8.9□□□□□ -0.99
LIG1-201ENST00000263274 HTN3P15516 51 aa8.9□□□□□ -0.99
LIG1-201ENST00000263274 SMR3AQ99954 134 aa8.9□□□□□ -0.99
LIG1-201ENST00000263274 A0A1B0GX51 115 aa8.89□□□□□ -0.99
LIG1-201ENST00000263274 PDZD2O15018 2839 aa8.89□□□□□ -0.99
LIG1-201ENST00000263274 PRR3P79522 188 aaKnown RBP8.89□□□□□ -0.99
LIG1-201ENST00000263274 TRBV6-4A0A1B0GX49 114 aa8.89□□□□□ -0.99
LIG1-201ENST00000263274 V9GYY9 64 aa8.89□□□□□ -0.99
LIG1-201ENST00000263274 CYSRT1A8MQ03 144 aa8.88□□□□□ -0.99
LIG1-201ENST00000263274 FHL2Q14192 279 aa8.88□□□□□ -0.99
LIG1-201ENST00000263274 IGKV2-28A0A075B6P5 120 aa8.87□□□□□ -0.99
LIG1-201ENST00000263274 IGKV2D-28P01615 120 aa8.87□□□□□ -0.99
LIG1-201ENST00000263274 INAFM2P0DMQ5 153 aa8.87□□□□□ -0.99
LIG1-201ENST00000263274 NCR3O14931 201 aa8.87□□□□□ -0.99
LIG1-201ENST00000263274 SS18Q15532 418 aa8.87□□□□□ -0.99
LIG1-201ENST00000263274 PLAC8L1A1L4L8 177 aa8.86□□□□□ -0.99
LIG1-201ENST00000263274 IL17DQ8TAD2 202 aa8.86□□□□□ -0.99
LIG1-201ENST00000263274 CYSTM1Q9H1C7 97 aa8.86□□□□□ -0.99
LIG1-201ENST00000263274 IGHV3OR16-9A0A0B4J2B5 98 aa8.86□□□□□ -0.99
LIG1-201ENST00000263274 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
LIG1-201ENST00000263274 ATOX1O00244 68 aa8.86□□□□□ -0.99
LIG1-201ENST00000263274 CMC4P56277 68 aaPredicted RBP8.86□□□□□ -0.99
LIG1-201ENST00000263274 TMEM86BQ8N661 226 aa8.86□□□□□ -0.99
LIG1-201ENST00000263274 LINC00482Q8N8I6 264 aa8.86□□□□□ -0.99
LIG1-201ENST00000263274 C9orf129Q5T035 196 aaKnown RBP8.85□□□□□ -0.99
LIG1-201ENST00000263274 RPL28P46779 137 aaKnown RBP8.85□□□□□ -0.99
LIG1-201ENST00000263274 A0A087WVE0 104 aa8.84□□□□□ -0.99
LIG1-201ENST00000263274 ANGP03950 147 aaKnown RBP8.84□□□□□ -0.99
LIG1-201ENST00000263274 IGLV1-51P01701 117 aa8.84□□□□□ -0.99
LIG1-201ENST00000263274 HIST1H4AP62805 103 aaKnown RBP8.83□□□□□ -1
LIG1-201ENST00000263274 C9orf116Q5BN46 136 aaPredicted RBP8.83□□□□□ -1
LIG1-201ENST00000263274 DEFB121Q5J5C9 76 aa8.83□□□□□ -1
LIG1-201ENST00000263274 LINC00269Q8N2A0 174 aa8.83□□□□□ -1
LIG1-201ENST00000263274 IBA57-AS1B1ANH7 110 aa8.83□□□□□ -1
LIG1-201ENST00000263274 KRTAP1-3Q8IUG1 177 aa8.83□□□□□ -1
LIG1-201ENST00000263274 A0A0U1RQV1 116 aa8.82□□□□□ -1
LIG1-201ENST00000263274 Q8N3U1 123 aa8.82□□□□□ -1
LIG1-201ENST00000263274 A0A087WZ39 114 aa8.82□□□□□ -1
LIG1-201ENST00000263274 FAM236DA0A1B0GTK5 79 aa8.82□□□□□ -1
LIG1-201ENST00000263274 FAM236CP0DP71 79 aa8.82□□□□□ -1
LIG1-201ENST00000263274 CRYGAP11844 174 aa8.82□□□□□ -1
LIG1-201ENST00000263274 DPH3Q96FX2 82 aa8.82□□□□□ -1
LIG1-201ENST00000263274 LINC01600Q96MT4 127 aa8.82□□□□□ -1
LIG1-201ENST00000263274 H0YGX0 51 aa8.82□□□□□ -1
LIG1-201ENST00000263274 DEFB135Q30KP9 77 aa8.82□□□□□ -1
LIG1-201ENST00000263274 FAM222AQ5U5X8 452 aa8.81□□□□□ -1
LIG1-201ENST00000263274 FAM19A3Q7Z5A8 133 aa8.81□□□□□ -1
LIG1-201ENST00000263274 OVOL2Q9BRP0 275 aa8.8□□□□□ -1
LIG1-201ENST00000263274 C19orf73Q9NVV2 129 aa8.8□□□□□ -1
LIG1-201ENST00000263274 CSNK1G2-AS1Q8NCQ2 148 aa8.8□□□□□ -1
LIG1-201ENST00000263274 C2orf48Q96LS8 159 aa8.8□□□□□ -1
LIG1-201ENST00000263274 RPL18AQ02543 176 aaKnown RBP8.79□□□□□ -1
LIG1-201ENST00000263274 S100A7L2Q5SY68 101 aa8.79□□□□□ -1
LIG1-201ENST00000263274 LINC00336Q6ZUF6 198 aa8.79□□□□□ -1
LIG1-201ENST00000263274 ORMDL1Q9P0S3 153 aa8.79□□□□□ -1
LIG1-201ENST00000263274 COL6A5A8TX70 2615 aa8.79□□□□□ -1
LIG1-201ENST00000263274 TMEM258P61165 79 aa8.79□□□□□ -1
LIG1-201ENST00000263274 RPS28P62857 69 aaKnown RBP8.79□□□□□ -1
LIG1-201ENST00000263274 CXCL5P42830 114 aa8.78□□□□□ -1
LIG1-201ENST00000263274 PRO0255Q9UI72 69 aa8.78□□□□□ -1
LIG1-201ENST00000263274 C22orf24Q9Y442 160 aa8.78□□□□□ -1
LIG1-201ENST00000263274 NSD1Q96L73 2696 aaPredicted RBP8.78□□□□□ -1
LIG1-201ENST00000263274 PRO0628Q9UI54 55 aa8.78□□□□□ -1
LIG1-201ENST00000263274 AKAP9Q99996 3911 aa8.78□□□□□ -1
LIG1-201ENST00000263274 LINC00846Q9NV44 126 aa8.77□□□□□ -1.01
LIG1-201ENST00000263274 SERP2Q8N6R1 65 aa8.77□□□□□ -1.01
LIG1-201ENST00000263274 OXTP01178 125 aa8.76□□□□□ -1.01
LIG1-201ENST00000263274 CHCHD10Q8WYQ3 142 aaPredicted RBP8.76□□□□□ -1.01
LIG1-201ENST00000263274 DAD1P61803 113 aa8.76□□□□□ -1.01
LIG1-201ENST00000263274 VWFP04275 2813 aa8.76□□□□□ -1.01
LIG1-201ENST00000263274 WFDC9Q8NEX5 89 aa8.76□□□□□ -1.01
LIG1-201ENST00000263274 RETNQ9HD89 108 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms