RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 OTOGLQ3ZCN5 2332 aa8.63□□□□□ -1.03
SMG6-201ENST00000263073 MRGPRG-AS1Q2M3A8 158 aa8.62□□□□□ -1.03
SMG6-201ENST00000263073 KIR2DL5BQ8NHK3 375 aa8.62□□□□□ -1.03
SMG6-201ENST00000263073 BRI3O95415 125 aa8.61□□□□□ -1.03
SMG6-201ENST00000263073 SPINK1P00995 79 aa8.61□□□□□ -1.03
SMG6-201ENST00000263073 C10orf25Q5T742 122 aa8.61□□□□□ -1.03
SMG6-201ENST00000263073 AMELXQ99217 191 aa8.61□□□□□ -1.03
SMG6-201ENST00000263073 RAI1Q7Z5J4 1906 aaPredicted RBP8.61□□□□□ -1.03
SMG6-201ENST00000263073 TRAV10A0A0B4J240 114 aa8.61□□□□□ -1.03
SMG6-201ENST00000263073 TRBV7-6A0A0J9YX20 115 aa8.61□□□□□ -1.03
SMG6-201ENST00000263073 SONP18583 2426 aaKnown RBP8.6□□□□□ -1.03
SMG6-201ENST00000263073 HIVEP3Q5T1R4 2406 aa8.6□□□□□ -1.03
SMG6-201ENST00000263073 TRBV7-7A0A0K0K1E9 115 aa8.6□□□□□ -1.03
SMG6-201ENST00000263073 SHISA2Q6UWI4 295 aa8.6□□□□□ -1.03
SMG6-201ENST00000263073 CIRBP-AS1Q8TBR5 109 aa8.6□□□□□ -1.03
SMG6-201ENST00000263073 CRYGAP11844 174 aa8.6□□□□□ -1.03
SMG6-201ENST00000263073 WDR87Q6ZQQ6 2873 aa8.59□□□□□ -1.03
SMG6-201ENST00000263073 LINC00337Q8N6G1 96 aa8.59□□□□□ -1.03
SMG6-201ENST00000263073 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.03
SMG6-201ENST00000263073 FHL2Q14192 279 aa8.59□□□□□ -1.03
SMG6-201ENST00000263073 Q6ZVQ6 151 aa8.59□□□□□ -1.03
SMG6-201ENST00000263073 C4orf26Q17RF5 130 aa8.58□□□□□ -1.04
SMG6-201ENST00000263073 X6R8D5 127 aa8.58□□□□□ -1.04
SMG6-201ENST00000263073 NOTCH2Q04721 2471 aa8.58□□□□□ -1.04
SMG6-201ENST00000263073 REG3GQ6UW15 175 aa8.57□□□□□ -1.04
SMG6-201ENST00000263073 C7orf33Q8WU49 177 aa8.57□□□□□ -1.04
SMG6-201ENST00000263073 A0A087WSZ3 146 aa8.57□□□□□ -1.04
SMG6-201ENST00000263073 SBSPONQ8IVN8 264 aa8.56□□□□□ -1.04
SMG6-201ENST00000263073 LY6G6CO95867 125 aa8.56□□□□□ -1.04
SMG6-201ENST00000263073 Q8N2B8 174 aa8.56□□□□□ -1.04
SMG6-201ENST00000263073 TMEM254Q8TBM7 123 aa8.56□□□□□ -1.04
SMG6-201ENST00000263073 CPAMD8Q8IZJ3 1885 aa8.56□□□□□ -1.04
SMG6-201ENST00000263073 LRP4O75096 1905 aa8.56□□□□□ -1.04
SMG6-201ENST00000263073 H0Y9P7 68 aa8.55□□□□□ -1.04
SMG6-201ENST00000263073 KRTAP10-9P60411 292 aa8.55□□□□□ -1.04
SMG6-201ENST00000263073 COL5A1P20908 1838 aaPredicted RBP8.55□□□□□ -1.04
SMG6-201ENST00000263073 PIEZO2Q9H5I5 2752 aa8.54□□□□□ -1.04
SMG6-201ENST00000263073 Q9BRP9 147 aa8.54□□□□□ -1.04
SMG6-201ENST00000263073 ACACBO00763 2458 aa8.54□□□□□ -1.04
SMG6-201ENST00000263073 Q6ZTC4 211 aa8.54□□□□□ -1.04
SMG6-201ENST00000263073 ZNF706Q9Y5V0 76 aaPredicted RBP8.53□□□□□ -1.04
SMG6-201ENST00000263073 A0A1W2PPR1 153 aa8.53□□□□□ -1.04
SMG6-201ENST00000263073 TTC28Q96AY4 2481 aa8.53□□□□□ -1.04
SMG6-201ENST00000263073 SMIM29Q86T20 159 aa8.52□□□□□ -1.04
SMG6-201ENST00000263073 EGFEM1PQ0D2K5 195 aa8.52□□□□□ -1.05
SMG6-201ENST00000263073 AGRNO00468 2067 aa8.52□□□□□ -1.05
SMG6-201ENST00000263073 PRLHP81277 87 aa8.52□□□□□ -1.05
SMG6-201ENST00000263073 PRRC2AP48634 2157 aaKnown RBP8.52□□□□□ -1.05
SMG6-201ENST00000263073 FAM218AQ96MZ4 157 aa8.52□□□□□ -1.05
SMG6-201ENST00000263073 MUC7Q8TAX7 377 aa8.51□□□□□ -1.05
SMG6-201ENST00000263073 HTTP42858 3142 aa8.51□□□□□ -1.05
SMG6-201ENST00000263073 Q6ZRU5 148 aa8.5□□□□□ -1.05
SMG6-201ENST00000263073 COX8CQ7Z4L0 72 aa8.49□□□□□ -1.05
SMG6-201ENST00000263073 HCG22E2RYF7 251 aa8.49□□□□□ -1.05
SMG6-201ENST00000263073 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
SMG6-201ENST00000263073 TET2Q6N021 2002 aaPredicted RBP8.49□□□□□ -1.05
SMG6-201ENST00000263073 IL17DQ8TAD2 202 aa8.48□□□□□ -1.05
SMG6-201ENST00000263073 ABCA2Q9BZC7 2435 aa8.48□□□□□ -1.05
SMG6-201ENST00000263073 PRO0461Q9UI25 63 aa8.47□□□□□ -1.05
SMG6-201ENST00000263073 KIF25-AS1Q9Y6Z4 181 aa8.47□□□□□ -1.05
SMG6-201ENST00000263073 IGLV1-51P01701 117 aa8.46□□□□□ -1.05
SMG6-201ENST00000263073 KIAA0087Q14695 138 aa8.46□□□□□ -1.06
SMG6-201ENST00000263073 SPATA3Q8NHX4 192 aa8.45□□□□□ -1.06
SMG6-201ENST00000263073 LYPD5Q6UWN5 251 aa8.44□□□□□ -1.06
SMG6-201ENST00000263073 C1orf64Q8NEQ6 169 aa8.44□□□□□ -1.06
SMG6-201ENST00000263073 BPTFQ12830 3046 aa8.44□□□□□ -1.06
SMG6-201ENST00000263073 CACNA1AO00555 2505 aa8.43□□□□□ -1.06
SMG6-201ENST00000263073 C10orf142B7Z368 130 aa8.43□□□□□ -1.06
SMG6-201ENST00000263073 LINC00474Q9P2X8 69 aa8.42□□□□□ -1.06
SMG6-201ENST00000263073 PRO0628Q9UI54 55 aa8.42□□□□□ -1.06
SMG6-201ENST00000263073 LINC00315P59091 139 aa8.41□□□□□ -1.06
SMG6-201ENST00000263073 CCDC168Q8NDH2 2452 aa8.41□□□□□ -1.06
SMG6-201ENST00000263073 LINC01546A6NGU7 62 aa8.41□□□□□ -1.06
SMG6-201ENST00000263073 BRCA2P51587 3418 aa8.41□□□□□ -1.06
SMG6-201ENST00000263073 FSHBP01225 129 aa8.4□□□□□ -1.06
SMG6-201ENST00000263073 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.06
SMG6-201ENST00000263073 C22orf24Q9Y442 160 aa8.4□□□□□ -1.06
SMG6-201ENST00000263073 CXCL6P80162 114 aa8.4□□□□□ -1.07
SMG6-201ENST00000263073 C11orf72Q8NBR9 251 aa8.4□□□□□ -1.07
SMG6-201ENST00000263073 IGLV5-52A0A0A0MRZ9 124 aa8.39□□□□□ -1.07
SMG6-201ENST00000263073 IGLV5-39A0A0G2JS06 123 aa8.39□□□□□ -1.07
SMG6-201ENST00000263073 ADAMTS20P59510 1910 aa8.39□□□□□ -1.07
SMG6-201ENST00000263073 SMCR5Q8TEV8 140 aa8.39□□□□□ -1.07
SMG6-201ENST00000263073 A0A1B0GUV1 79 aa8.39□□□□□ -1.07
SMG6-201ENST00000263073 MUC4Q99102 2169 aa8.39□□□□□ -1.07
SMG6-201ENST00000263073 IGKV2D-30A0A075B6S6 120 aa8.39□□□□□ -1.07
SMG6-201ENST00000263073 IGKV2-30P06310 120 aa8.39□□□□□ -1.07
SMG6-201ENST00000263073 TM2D3Q9BRN9 247 aa8.38□□□□□ -1.07
SMG6-201ENST00000263073 NAV2Q8IVL1 2488 aa8.38□□□□□ -1.07
SMG6-201ENST00000263073 MYO18BQ8IUG5 2567 aa8.37□□□□□ -1.07
SMG6-201ENST00000263073 RPL37AP61513 92 aaKnown RBP8.37□□□□□ -1.07
SMG6-201ENST00000263073 PTPRBP23467 1997 aa8.37□□□□□ -1.07
SMG6-201ENST00000263073 IGLV8-61A0A075B6I0 122 aa8.36□□□□□ -1.07
SMG6-201ENST00000263073 IGHV3OR16-9A0A0B4J2B5 98 aa8.36□□□□□ -1.07
SMG6-201ENST00000263073 C6orf48Q9UBA6 75 aa8.35□□□□□ -1.07
SMG6-201ENST00000263073 hDV103S1A0JD37 113 aa8.35□□□□□ -1.07
SMG6-201ENST00000263073 C7orf65Q6ZTY9 151 aa8.33□□□□□ -1.08
SMG6-201ENST00000263073 IGF2RP11717 2491 aa8.33□□□□□ -1.08
SMG6-201ENST00000263073 C2orf48Q96LS8 159 aa8.33□□□□□ -1.08
SMG6-201ENST00000263073 FHL3Q13643 280 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms