RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 Q8IZM0 81 aa7.41□□□□□ -1.22
TRAF4-202ENST00000262396 XAGE1AQ9HD64 81 aa7.41□□□□□ -1.22
TRAF4-202ENST00000262396 NUPR1O60356 82 aa7.4□□□□□ -1.22
TRAF4-202ENST00000262396 NDUFA5Q16718 116 aa7.4□□□□□ -1.22
TRAF4-202ENST00000262396 SCGB3A1Q96QR1 104 aa7.4□□□□□ -1.22
TRAF4-202ENST00000262396 AMELXQ99217 191 aa7.4□□□□□ -1.22
TRAF4-202ENST00000262396 C22orf24Q9Y442 160 aa7.4□□□□□ -1.22
TRAF4-202ENST00000262396 TMEM218A2RU14 115 aa7.39□□□□□ -1.23
TRAF4-202ENST00000262396 F8VRH5 84 aa7.39□□□□□ -1.23
TRAF4-202ENST00000262396 ZNF861PO60384 105 aa7.39□□□□□ -1.23
TRAF4-202ENST00000262396 CXCL5P42830 114 aa7.39□□□□□ -1.23
TRAF4-202ENST00000262396 IGIPA6NJ69 53 aa7.38□□□□□ -1.23
TRAF4-202ENST00000262396 RPL28P46779 137 aaKnown RBP7.38□□□□□ -1.23
TRAF4-202ENST00000262396 SEC11CQ9BY50 192 aa7.38□□□□□ -1.23
TRAF4-202ENST00000262396 CDKN2A-AS1Q9UH64 79 aa7.38□□□□□ -1.23
TRAF4-202ENST00000262396 S100PP25815 95 aa7.37□□□□□ -1.23
TRAF4-202ENST00000262396 KIAA1644Q3SXP7 199 aa7.37□□□□□ -1.23
TRAF4-202ENST00000262396 LINC00173Q6ZV60 143 aa7.37□□□□□ -1.23
TRAF4-202ENST00000262396 MRPL55Q7Z7F7 128 aaKnown RBP7.37□□□□□ -1.23
TRAF4-202ENST00000262396 TIMM17AQ99595 171 aa7.37□□□□□ -1.23
TRAF4-202ENST00000262396 CARHSP1Q9Y2V2 147 aaKnown RBP7.37□□□□□ -1.23
TRAF4-202ENST00000262396 TSPAN13O95857 204 aa7.36□□□□□ -1.23
TRAF4-202ENST00000262396 RAB5BP61020 215 aa7.36□□□□□ -1.23
TRAF4-202ENST00000262396 KRTAP7-1Q8IUC3 87 aa7.36□□□□□ -1.23
TRAF4-202ENST00000262396 NKAPP1Q8N9T2 125 aa7.36□□□□□ -1.23
TRAF4-202ENST00000262396 TOMM6Q96B49 74 aa7.36□□□□□ -1.23
TRAF4-202ENST00000262396 SMCO4Q9NRQ5 59 aa7.36□□□□□ -1.23
TRAF4-202ENST00000262396 GAGE10A6NGK3 116 aa7.35□□□□□ -1.23
TRAF4-202ENST00000262396 LINC01549A6NIU2 74 aa7.35□□□□□ -1.23
TRAF4-202ENST00000262396 ADCYAP1P18509 176 aa7.35□□□□□ -1.23
TRAF4-202ENST00000262396 ERASQ7Z444 233 aa7.35□□□□□ -1.23
TRAF4-202ENST00000262396 FAM19A3Q7Z5A8 133 aa7.35□□□□□ -1.23
TRAF4-202ENST00000262396 COX7B2Q8TF08 81 aa7.35□□□□□ -1.23
TRAF4-202ENST00000262396 H3BRM9 83 aa7.34□□□□□ -1.23
TRAF4-202ENST00000262396 KRTAP1-4P0C5Y4 121 aa7.34□□□□□ -1.23
TRAF4-202ENST00000262396 UBE2AP49459 152 aa7.34□□□□□ -1.23
TRAF4-202ENST00000262396 PDZD11Q5EBL8 140 aa7.34□□□□□ -1.23
TRAF4-202ENST00000262396 FA2HQ7L5A8 372 aa7.34□□□□□ -1.23
TRAF4-202ENST00000262396 TINCRA0A1B0GVN0 87 aa7.33□□□□□ -1.24
TRAF4-202ENST00000262396 RPL37AP8A6NKH3 93 aa7.33□□□□□ -1.24
TRAF4-202ENST00000262396 BCE1O60756 84 aa7.33□□□□□ -1.24
TRAF4-202ENST00000262396 ATP5LO75964 103 aa7.33□□□□□ -1.24
TRAF4-202ENST00000262396 CRYGAP11844 174 aa7.33□□□□□ -1.24
TRAF4-202ENST00000262396 NDUFA6P56556 154 aa7.33□□□□□ -1.24
TRAF4-202ENST00000262396 TYMSOSQ8TAI1 123 aa7.33□□□□□ -1.24
TRAF4-202ENST00000262396 TP73-AS1Q9UF72 201 aa7.33□□□□□ -1.24
TRAF4-202ENST00000262396 SPINK8P0C7L1 97 aa7.32□□□□□ -1.24
TRAF4-202ENST00000262396 RHEBQ15382 184 aa7.32□□□□□ -1.24
TRAF4-202ENST00000262396 TRAV9-1A0A075B6T8 112 aa7.31□□□□□ -1.24
TRAF4-202ENST00000262396 SMIM1B2RUZ4 78 aa7.31□□□□□ -1.24
TRAF4-202ENST00000262396 C10orf91Q5T1B1 145 aa7.31□□□□□ -1.24
TRAF4-202ENST00000262396 SVBPQ8N300 66 aa7.31□□□□□ -1.24
TRAF4-202ENST00000262396 LINC00167Q96N53 147 aa7.31□□□□□ -1.24
TRAF4-202ENST00000262396 SNAPINO95295 136 aa7.3□□□□□ -1.24
TRAF4-202ENST00000262396 APOC3P02656 99 aa7.3□□□□□ -1.24
TRAF4-202ENST00000262396 FABP9Q0Z7S8 132 aa7.3□□□□□ -1.24
TRAF4-202ENST00000262396 PMVKQ15126 192 aa7.3□□□□□ -1.24
TRAF4-202ENST00000262396 MRPL18Q9H0U6 180 aaKnown RBP7.3□□□□□ -1.24
TRAF4-202ENST00000262396 A0A0U1RQV1 116 aa7.29□□□□□ -1.24
TRAF4-202ENST00000262396 PFN2P35080 140 aa7.29□□□□□ -1.24
TRAF4-202ENST00000262396 COX19Q49B96 90 aa7.29□□□□□ -1.24
TRAF4-202ENST00000262396 GNB1LQ9BYB4 327 aa7.29□□□□□ -1.24
TRAF4-202ENST00000262396 CST9LQ9H4G1 147 aa7.29□□□□□ -1.24
TRAF4-202ENST00000262396 RPS10P5Q9NQ39 176 aa7.29□□□□□ -1.24
TRAF4-202ENST00000262396 LPAP08519 4548 aa7.28□□□□□ -1.24
TRAF4-202ENST00000262396 IGKV2-28A0A075B6P5 120 aa7.27□□□□□ -1.25
TRAF4-202ENST00000262396 IGKV2D-28P01615 120 aa7.27□□□□□ -1.25
TRAF4-202ENST00000262396 IGKV2D-26A0A0A0MRZ7 120 aa7.26□□□□□ -1.25
TRAF4-202ENST00000262396 RPL24P83731 157 aaKnown RBP7.26□□□□□ -1.25
TRAF4-202ENST00000262396 IGLV5-45A0A087WSX0 123 aa7.25□□□□□ -1.25
TRAF4-202ENST00000262396 S100A1P23297 94 aa7.25□□□□□ -1.25
TRAF4-202ENST00000262396 FAM19A1Q7Z5A9 133 aa7.25□□□□□ -1.25
TRAF4-202ENST00000262396 ANAPC11Q9NYG5 84 aa7.25□□□□□ -1.25
TRAF4-202ENST00000262396 A0A087X002 238 aa7.24□□□□□ -1.25
TRAF4-202ENST00000262396 SLC7A5P1Q8MH63 180 aa7.24□□□□□ -1.25
TRAF4-202ENST00000262396 IGLV5-37A0A075B6J1 123 aa7.23□□□□□ -1.25
TRAF4-202ENST00000262396 ATP6V1G1O75348 118 aa7.23□□□□□ -1.25
TRAF4-202ENST00000262396 TMEM170BQ5T4T1 132 aa7.23□□□□□ -1.25
TRAF4-202ENST00000262396 ZNF625Q96I27 306 aaPredicted RBP7.23□□□□□ -1.25
TRAF4-202ENST00000262396 ERG28Q9UKR5 140 aa7.23□□□□□ -1.25
TRAF4-202ENST00000262396 SCO1O75880 301 aa7.22□□□□□ -1.25
TRAF4-202ENST00000262396 PRLHP81277 87 aa7.22□□□□□ -1.25
TRAF4-202ENST00000262396 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
TRAF4-202ENST00000262396 TRAPPC1Q9Y5R8 145 aa7.22□□□□□ -1.25
TRAF4-202ENST00000262396 LINC01546A6NGU7 62 aa7.21□□□□□ -1.26
TRAF4-202ENST00000262396 HBDP02042 147 aa7.21□□□□□ -1.26
TRAF4-202ENST00000262396 IGLC3P0DOY3 106 aa7.21□□□□□ -1.26
TRAF4-202ENST00000262396 SFTA2Q6UW10 78 aa7.21□□□□□ -1.26
TRAF4-202ENST00000262396 LINC00614P0C842 121 aa7.2□□□□□ -1.26
TRAF4-202ENST00000262396 ZNF22P17026 224 aaPredicted RBP7.2□□□□□ -1.26
TRAF4-202ENST00000262396 LINC00158P58513 81 aa7.2□□□□□ -1.26
TRAF4-202ENST00000262396 COX17Q14061 63 aa7.2□□□□□ -1.26
TRAF4-202ENST00000262396 FAM229BQ4G0N7 80 aa7.2□□□□□ -1.26
TRAF4-202ENST00000262396 BAGE3Q86Y29 109 aa7.2□□□□□ -1.26
TRAF4-202ENST00000262396 CBLN2Q8IUK8 224 aa7.2□□□□□ -1.26
TRAF4-202ENST00000262396 SND1-IT1Q9HBX3 110 aa7.2□□□□□ -1.26
TRAF4-202ENST00000262396 RETNLBQ9BQ08 111 aa7.19□□□□□ -1.26
TRAF4-202ENST00000262396 HIGD2AQ9BW72 106 aa7.19□□□□□ -1.26
TRAF4-202ENST00000262396 TMEM126AQ9H061 195 aa7.19□□□□□ -1.26
TRAF4-202ENST00000262396 CDIP1Q9H305 208 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms