RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 IGHV3-30P01768 117 aa18.9■□□□□ 0.62
SMARCD3-201ENST00000262188 IGHV3-30-5P0DP03 117 aa18.9■□□□□ 0.62
SMARCD3-201ENST00000262188 CRYGAP11844 174 aa18.9■□□□□ 0.62
SMARCD3-201ENST00000262188 SFTA2Q6UW10 78 aa18.9■□□□□ 0.62
SMARCD3-201ENST00000262188 CHCHD7Q9BUK0 85 aa18.89■□□□□ 0.61
SMARCD3-201ENST00000262188 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-201ENST00000262188 TRBV6-8A0A0A6YYG3 113 aa18.88■□□□□ 0.61
SMARCD3-201ENST00000262188 IGKV2-29A2NJV5 120 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-201ENST00000262188 HERVK_113P61574 105 aa18.88■□□□□ 0.61
SMARCD3-201ENST00000262188 RPL39P62891 51 aaKnown RBP18.86■□□□□ 0.61
SMARCD3-201ENST00000262188 ORMDL2Q53FV1 153 aa18.86■□□□□ 0.61
SMARCD3-201ENST00000262188 IGHV3-33P01772 117 aa18.86■□□□□ 0.61
SMARCD3-201ENST00000262188 Q8N3U1 123 aa18.84■□□□□ 0.61
SMARCD3-201ENST00000262188 PLEKHB2Q96CS7 222 aa18.84■□□□□ 0.61
SMARCD3-201ENST00000262188 LINC00588Q9Y4M8 146 aa18.84■□□□□ 0.61
SMARCD3-201ENST00000262188 FAM236AA0A1B0GUQ0 79 aa18.84■□□□□ 0.61
SMARCD3-201ENST00000262188 FAM236BA0A1B0GV22 79 aa18.84■□□□□ 0.61
SMARCD3-201ENST00000262188 F8WDY8 70 aa18.84■□□□□ 0.61
SMARCD3-201ENST00000262188 COX7CP15954 63 aa18.84■□□□□ 0.61
SMARCD3-201ENST00000262188 CXCL5P42830 114 aa18.84■□□□□ 0.61
SMARCD3-201ENST00000262188 TEX49A0A1B0GTD5 131 aa18.83■□□□□ 0.61
SMARCD3-201ENST00000262188 PMVKQ15126 192 aa18.83■□□□□ 0.61
SMARCD3-201ENST00000262188 CASC10Q5T4H9 136 aa18.83■□□□□ 0.61
SMARCD3-201ENST00000262188 TOMM6Q96B49 74 aa18.83■□□□□ 0.61
SMARCD3-201ENST00000262188 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.82■□□□□ 0.6
SMARCD3-201ENST00000262188 TRBV30A0A0K0K1B3 111 aa18.82■□□□□ 0.6
SMARCD3-201ENST00000262188 GAGE2AQ6NT46 116 aa18.82■□□□□ 0.6
SMARCD3-201ENST00000262188 TMEM243Q9BU79 118 aa18.82■□□□□ 0.6
SMARCD3-201ENST00000262188 LELP1Q5T871 98 aa18.81■□□□□ 0.6
SMARCD3-201ENST00000262188 WFDC10BQ8IUB3 73 aa18.81■□□□□ 0.6
SMARCD3-201ENST00000262188 C20orf203Q8NBC4 194 aa18.81■□□□□ 0.6
SMARCD3-201ENST00000262188 TMEM258P61165 79 aa18.8■□□□□ 0.6
SMARCD3-201ENST00000262188 SCGB3A1Q96QR1 104 aa18.8■□□□□ 0.6
SMARCD3-201ENST00000262188 C2orf66Q6UXQ4 117 aa18.79■□□□□ 0.6
SMARCD3-201ENST00000262188 C2orf82Q6UX34 121 aa18.78■□□□□ 0.6
SMARCD3-201ENST00000262188 CCL18P55774 89 aa18.77■□□□□ 0.6
SMARCD3-201ENST00000262188 LINC00643Q86TS7 51 aa18.77■□□□□ 0.6
SMARCD3-201ENST00000262188 TIRAPP58753 221 aa18.77■□□□□ 0.59
SMARCD3-201ENST00000262188 OPRPNQ99935 248 aaPredicted RBP18.76■□□□□ 0.59
SMARCD3-201ENST00000262188 UBE2L6O14933 153 aa18.75■□□□□ 0.59
SMARCD3-201ENST00000262188 C3orf84H3BNL1 204 aa18.73■□□□□ 0.59
SMARCD3-201ENST00000262188 UBE2DNLQ8IWF7 75 aa18.73■□□□□ 0.59
SMARCD3-201ENST00000262188 DNAH1Q9P2D7 4330 aa18.72■□□□□ 0.59
SMARCD3-201ENST00000262188 RNASE13Q5GAN3 156 aaKnown RBP18.72■□□□□ 0.59
SMARCD3-201ENST00000262188 UBE2D4Q9Y2X8 147 aa18.72■□□□□ 0.59
SMARCD3-201ENST00000262188 IGLV4-60A0A075B6I1 120 aa18.71■□□□□ 0.59
SMARCD3-201ENST00000262188 ATOX1O00244 68 aa18.71■□□□□ 0.59
SMARCD3-201ENST00000262188 TRACP01848 142 aa18.71■□□□□ 0.59
SMARCD3-201ENST00000262188 IGHV3-30-3P0DP02 117 aa18.71■□□□□ 0.59
SMARCD3-201ENST00000262188 FAM104AQ969W3 186 aa18.7■□□□□ 0.58
SMARCD3-201ENST00000262188 SDIM1Q6ZPB5 146 aa18.68■□□□□ 0.58
SMARCD3-201ENST00000262188 C5orf38Q86SI9 138 aa18.68■□□□□ 0.58
SMARCD3-201ENST00000262188 DPH3Q96FX2 82 aa18.68■□□□□ 0.58
SMARCD3-201ENST00000262188 VPS13DQ5THJ4 4388 aa18.68■□□□□ 0.58
SMARCD3-201ENST00000262188 COX6CP09669 75 aa18.68■□□□□ 0.58
SMARCD3-201ENST00000262188 IGIPA6NJ69 53 aa18.67■□□□□ 0.58
SMARCD3-201ENST00000262188 C11orf86A6NJI1 115 aa18.67■□□□□ 0.58
SMARCD3-201ENST00000262188 H7C423 109 aa18.67■□□□□ 0.58
SMARCD3-201ENST00000262188 C2orf48Q96LS8 159 aa18.66■□□□□ 0.58
SMARCD3-201ENST00000262188 HIST1H4AP62805 103 aaKnown RBP18.64■□□□□ 0.58
SMARCD3-201ENST00000262188 CLPSL2Q6UWE3 100 aa18.64■□□□□ 0.58
SMARCD3-201ENST00000262188 DGAT2L7PQ6IED9 249 aa18.64■□□□□ 0.57
SMARCD3-201ENST00000262188 UPK3BQ9BT76 320 aa18.64■□□□□ 0.57
SMARCD3-201ENST00000262188 Q9H8V8 135 aa18.64■□□□□ 0.57
SMARCD3-201ENST00000262188 IGLV4-3A0A075B6K6 122 aa18.63■□□□□ 0.57
SMARCD3-201ENST00000262188 Q1RN00 199 aa18.62■□□□□ 0.57
SMARCD3-201ENST00000262188 IGKV3OR2-268A0A0C4DH90 116 aa18.61■□□□□ 0.57
SMARCD3-201ENST00000262188 ANGP03950 147 aaKnown RBP18.61■□□□□ 0.57
SMARCD3-201ENST00000262188 AMELXQ99217 191 aa18.61■□□□□ 0.57
SMARCD3-201ENST00000262188 KLK12Q9UKR0 248 aa18.61■□□□□ 0.57
SMARCD3-201ENST00000262188 CDC42SE2Q9NRR3 84 aa18.6■□□□□ 0.57
SMARCD3-201ENST00000262188 PYGO1Q9Y3Y4 419 aa18.6■□□□□ 0.57
SMARCD3-201ENST00000262188 TIMM21Q9BVV7 248 aa18.59■□□□□ 0.57
SMARCD3-201ENST00000262188 PRO0628Q9UI54 55 aa18.59■□□□□ 0.57
SMARCD3-201ENST00000262188 A0A1B0GUV1 79 aa18.59■□□□□ 0.57
SMARCD3-201ENST00000262188 LY6G6CO95867 125 aa18.59■□□□□ 0.57
SMARCD3-201ENST00000262188 DNAH10OSP0CZ25 163 aa18.59■□□□□ 0.57
SMARCD3-201ENST00000262188 LINC01556Q5JQF7 62 aa18.59■□□□□ 0.57
SMARCD3-201ENST00000262188 TIMM17AQ99595 171 aa18.59■□□□□ 0.57
SMARCD3-201ENST00000262188 TMEM223A0PJW6 202 aa18.58■□□□□ 0.56
SMARCD3-201ENST00000262188 TRIAP1O43715 76 aa18.58■□□□□ 0.56
SMARCD3-201ENST00000262188 LGALS3P17931 250 aaKnown RBP18.58■□□□□ 0.56
SMARCD3-201ENST00000262188 MALP21145 153 aa18.58■□□□□ 0.56
SMARCD3-201ENST00000262188 LINC00269Q8N2A0 174 aa18.58■□□□□ 0.56
SMARCD3-201ENST00000262188 EIF4EBP3O60516 100 aaPredicted RBP18.57■□□□□ 0.56
SMARCD3-201ENST00000262188 TMEM141Q96I45 108 aa18.57■□□□□ 0.56
SMARCD3-201ENST00000262188 IGLV4-69A0A075B6H9 119 aa18.57■□□□□ 0.56
SMARCD3-201ENST00000262188 J3QQQ9 107 aa18.57■□□□□ 0.56
SMARCD3-201ENST00000262188 LST1O00453 97 aa18.57■□□□□ 0.56
SMARCD3-201ENST00000262188 Q5XG85 94 aa18.57■□□□□ 0.56
SMARCD3-201ENST00000262188 KMT2AQ03164 3969 aa18.57■□□□□ 0.56
SMARCD3-201ENST00000262188 KRTAP1-5Q9BYS1 174 aa18.56■□□□□ 0.56
SMARCD3-201ENST00000262188 ALMS1Q8TCU4 4167 aa18.55■□□□□ 0.56
SMARCD3-201ENST00000262188 LINC00476Q8WZB0 136 aa18.55■□□□□ 0.56
SMARCD3-201ENST00000262188 LEPROTO15243 131 aa18.53■□□□□ 0.56
SMARCD3-201ENST00000262188 MRPS36P82909 103 aaKnown RBP18.53■□□□□ 0.56
SMARCD3-201ENST00000262188 NDUFC2-KCTD14E9PQ53 114 aa18.52■□□□□ 0.56
SMARCD3-201ENST00000262188 ZNF22P17026 224 aaPredicted RBP18.52■□□□□ 0.56
SMARCD3-201ENST00000262188 TRAV13-1A0A0B4J241 112 aa18.51■□□□□ 0.55
SMARCD3-201ENST00000262188 ENHOQ6UWT2 76 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms