RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 C6orf226Q5I0X4 101 aa13.49□□□□□ -0.25
SCARB1-201ENST00000261693 LECT2O14960 151 aa13.48□□□□□ -0.25
SCARB1-201ENST00000261693 SDIM1Q6ZPB5 146 aa13.48□□□□□ -0.25
SCARB1-201ENST00000261693 SLPIP03973 132 aa13.47□□□□□ -0.25
SCARB1-201ENST00000261693 A0A096LPF7 62 aa13.47□□□□□ -0.25
SCARB1-201ENST00000261693 ITPR2Q14571 2701 aa13.47□□□□□ -0.25
SCARB1-201ENST00000261693 GYPEP15421 78 aa13.45□□□□□ -0.26
SCARB1-201ENST00000261693 TENM4Q6N022 2769 aa13.45□□□□□ -0.26
SCARB1-201ENST00000261693 SMIM20Q8N5G0 67 aa13.44□□□□□ -0.26
SCARB1-201ENST00000261693 H0YGX0 51 aa13.44□□□□□ -0.26
SCARB1-201ENST00000261693 NCR3O14931 201 aa13.43□□□□□ -0.26
SCARB1-201ENST00000261693 FAM110AQ9BQ89 295 aa13.43□□□□□ -0.26
SCARB1-201ENST00000261693 VWFP04275 2813 aa13.42□□□□□ -0.26
SCARB1-201ENST00000261693 PRR3P79522 188 aaKnown RBP13.42□□□□□ -0.26
SCARB1-201ENST00000261693 SVIPQ8NHG7 77 aa13.41□□□□□ -0.26
SCARB1-201ENST00000261693 ANK3Q12955 4377 aaKnown RBP13.41□□□□□ -0.26
SCARB1-201ENST00000261693 PDZD2O15018 2839 aa13.4□□□□□ -0.26
SCARB1-201ENST00000261693 SS18Q15532 418 aa13.4□□□□□ -0.26
SCARB1-201ENST00000261693 RNASE1P07998 156 aaKnown RBP13.39□□□□□ -0.27
SCARB1-201ENST00000261693 C16orf95Q9H693 158 aa13.39□□□□□ -0.27
SCARB1-201ENST00000261693 HIVEP2P31629 2446 aa13.38□□□□□ -0.27
SCARB1-201ENST00000261693 IGKV3D-7A0A0C4DH55 119 aa13.38□□□□□ -0.27
SCARB1-201ENST00000261693 CXCL5P42830 114 aa13.38□□□□□ -0.27
SCARB1-201ENST00000261693 LINC00846Q9NV44 126 aa13.38□□□□□ -0.27
SCARB1-201ENST00000261693 KRTAP1-1Q07627 177 aa13.37□□□□□ -0.27
SCARB1-201ENST00000261693 C9orf153Q5TBE3 101 aa13.37□□□□□ -0.27
SCARB1-201ENST00000261693 KLK5Q9Y337 293 aaPredicted RBP13.37□□□□□ -0.27
SCARB1-201ENST00000261693 C3orf22Q8N5N4 141 aa13.36□□□□□ -0.27
SCARB1-201ENST00000261693 OBSCN-AS1Q96MR7 158 aa13.36□□□□□ -0.27
SCARB1-201ENST00000261693 LY6G6DO95868 133 aa13.35□□□□□ -0.27
SCARB1-201ENST00000261693 Q8IZM0 81 aa13.35□□□□□ -0.27
SCARB1-201ENST00000261693 Q8N3U1 123 aa13.35□□□□□ -0.27
SCARB1-201ENST00000261693 KIR2DL5BQ8NHK3 375 aa13.35□□□□□ -0.27
SCARB1-201ENST00000261693 IGLV10-54A0A075B6I4 117 aa13.35□□□□□ -0.27
SCARB1-201ENST00000261693 LINC00269Q8N2A0 174 aa13.34□□□□□ -0.27
SCARB1-201ENST00000261693 DEFB4AO15263 64 aa13.34□□□□□ -0.27
SCARB1-201ENST00000261693 ORMDL1Q9P0S3 153 aa13.34□□□□□ -0.27
SCARB1-201ENST00000261693 A0A1B0GUV1 79 aa13.33□□□□□ -0.28
SCARB1-201ENST00000261693 C9orf116Q5BN46 136 aaPredicted RBP13.33□□□□□ -0.28
SCARB1-201ENST00000261693 UQCRQO14949 82 aa13.32□□□□□ -0.28
SCARB1-201ENST00000261693 PRO0255Q9UI72 69 aa13.32□□□□□ -0.28
SCARB1-201ENST00000261693 X6R8D5 127 aa13.32□□□□□ -0.28
SCARB1-201ENST00000261693 NANOS2P60321 138 aaKnown RBP13.31□□□□□ -0.28
SCARB1-201ENST00000261693 LINC00612Q8N6U2 182 aa13.31□□□□□ -0.28
SCARB1-201ENST00000261693 TMEM126AQ9H061 195 aa13.31□□□□□ -0.28
SCARB1-201ENST00000261693 A0A087WVE0 104 aa13.3□□□□□ -0.28
SCARB1-201ENST00000261693 LINC00482Q8N8I6 264 aa13.29□□□□□ -0.28
SCARB1-201ENST00000261693 KRTAP10-3P60369 221 aa13.29□□□□□ -0.28
SCARB1-201ENST00000261693 LINC00526Q96FQ7 95 aa13.28□□□□□ -0.28
SCARB1-201ENST00000261693 ANGP03950 147 aaKnown RBP13.28□□□□□ -0.28
SCARB1-201ENST00000261693 KIAA0087Q14695 138 aa13.28□□□□□ -0.28
SCARB1-201ENST00000261693 CFAP161Q6P656 301 aa13.28□□□□□ -0.28
SCARB1-201ENST00000261693 CHCHD10Q8WYQ3 142 aaPredicted RBP13.28□□□□□ -0.28
SCARB1-201ENST00000261693 HIST1H4AP62805 103 aaKnown RBP13.27□□□□□ -0.28
SCARB1-201ENST00000261693 Q8N814 137 aa13.27□□□□□ -0.29
SCARB1-201ENST00000261693 COX7CP15954 63 aa13.26□□□□□ -0.29
SCARB1-201ENST00000261693 C2orf48Q96LS8 159 aa13.26□□□□□ -0.29
SCARB1-201ENST00000261693 CD164L2Q6UWJ8 174 aa13.26□□□□□ -0.29
SCARB1-201ENST00000261693 Q6JHZ5 121 aa13.26□□□□□ -0.29
SCARB1-201ENST00000261693 Q8NDZ9 215 aa13.26□□□□□ -0.29
SCARB1-201ENST00000261693 SPATA3Q8NHX4 192 aa13.25□□□□□ -0.29
SCARB1-201ENST00000261693 ATOX1O00244 68 aa13.25□□□□□ -0.29
SCARB1-201ENST00000261693 HILS1P60008 231 aa13.25□□□□□ -0.29
SCARB1-201ENST00000261693 REG3AQ06141 175 aa13.25□□□□□ -0.29
SCARB1-201ENST00000261693 LINC01561Q8N1V8 128 aa13.25□□□□□ -0.29
SCARB1-201ENST00000261693 DEFB135Q30KP9 77 aa13.24□□□□□ -0.29
SCARB1-201ENST00000261693 CCKP06307 115 aa13.24□□□□□ -0.29
SCARB1-201ENST00000261693 SMR3AQ99954 134 aa13.24□□□□□ -0.29
SCARB1-201ENST00000261693 FASNP49327 2511 aaKnown RBP13.23□□□□□ -0.29
SCARB1-201ENST00000261693 A0A1B0GX51 115 aa13.23□□□□□ -0.29
SCARB1-201ENST00000261693 RPL18AQ02543 176 aaKnown RBP13.23□□□□□ -0.29
SCARB1-201ENST00000261693 C6orf99Q4VX62 202 aa13.22□□□□□ -0.29
SCARB1-201ENST00000261693 LINC00167Q96N53 147 aa13.22□□□□□ -0.29
SCARB1-201ENST00000261693 UNC79Q9P2D8 2635 aa13.22□□□□□ -0.29
SCARB1-201ENST00000261693 TENM1Q9UKZ4 2725 aa13.22□□□□□ -0.29
SCARB1-201ENST00000261693 HELZ2Q9BYK8 2649 aaKnown RBP13.21□□□□□ -0.29
SCARB1-201ENST00000261693 C6orf223Q8N319 242 aa13.21□□□□□ -0.29
SCARB1-201ENST00000261693 COX17Q14061 63 aa13.21□□□□□ -0.3
SCARB1-201ENST00000261693 hADV29S1A0JD25 119 aa13.2□□□□□ -0.3
SCARB1-201ENST00000261693 NDUFC2O95298 119 aa13.2□□□□□ -0.3
SCARB1-201ENST00000261693 SMIM9A6NGZ8 99 aa13.2□□□□□ -0.3
SCARB1-201ENST00000261693 WFDC9Q8NEX5 89 aa13.2□□□□□ -0.3
SCARB1-201ENST00000261693 CYSTM1Q9H1C7 97 aa13.2□□□□□ -0.3
SCARB1-201ENST00000261693 TMEM256-PLSCR3K7ERE1 68 aa13.19□□□□□ -0.3
SCARB1-201ENST00000261693 C10orf25Q5T742 122 aa13.19□□□□□ -0.3
SCARB1-201ENST00000261693 S100A7L2Q5SY68 101 aa13.19□□□□□ -0.3
SCARB1-201ENST00000261693 UNQ6190/PRO20217Q6UXQ8 127 aa13.18□□□□□ -0.3
SCARB1-201ENST00000261693 JMJD7-PLA2G4BH0Y9G9 81 aa13.18□□□□□ -0.3
SCARB1-201ENST00000261693 NOTCH2Q04721 2471 aa13.18□□□□□ -0.3
SCARB1-201ENST00000261693 LYRM9A8MSI8 78 aa13.17□□□□□ -0.3
SCARB1-201ENST00000261693 IGHV4-28A0A0C4DH34 117 aa13.17□□□□□ -0.3
SCARB1-201ENST00000261693 HTN3P15516 51 aa13.16□□□□□ -0.3
SCARB1-201ENST00000261693 USP17L23D6RBM5 183 aa13.16□□□□□ -0.3
SCARB1-201ENST00000261693 CRYGAP11844 174 aa13.16□□□□□ -0.3
SCARB1-201ENST00000261693 DAD1P61803 113 aa13.16□□□□□ -0.3
SCARB1-201ENST00000261693 CELA1Q9UNI1 258 aa13.16□□□□□ -0.3
SCARB1-201ENST00000261693 TRRAPQ9Y4A5 3859 aa13.14□□□□□ -0.31
SCARB1-201ENST00000261693 LOC107984640A0A0U1RRK4 108 aa13.13□□□□□ -0.31
SCARB1-201ENST00000261693 SPAG11BQ08648 103 aa13.13□□□□□ -0.31
SCARB1-201ENST00000261693 LINC00575Q6W349 94 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms