RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 REG3AQ06141 175 aa11.65□□□□□ -0.54
SREBF1-201ENST00000261646 LRBAP50851 2863 aa11.65□□□□□ -0.54
SREBF1-201ENST00000261646 IGKV2D-24A0A075B6R9 120 aa11.65□□□□□ -0.54
SREBF1-201ENST00000261646 H3BQ85 93 aa11.65□□□□□ -0.54
SREBF1-201ENST00000261646 DEFB113Q30KQ7 82 aa11.65□□□□□ -0.54
SREBF1-201ENST00000261646 LINC00959A0A1B0GUT2 108 aa11.64□□□□□ -0.55
SREBF1-201ENST00000261646 NDUFC2-KCTD14E9PQ53 114 aa11.64□□□□□ -0.55
SREBF1-201ENST00000261646 HILS1P60008 231 aa11.64□□□□□ -0.55
SREBF1-201ENST00000261646 APOC4P55056 127 aa11.63□□□□□ -0.55
SREBF1-201ENST00000261646 FAM19A4Q96LR4 140 aa11.63□□□□□ -0.55
SREBF1-201ENST00000261646 PRORYQ9H606 182 aa11.63□□□□□ -0.55
SREBF1-201ENST00000261646 MUC4Q99102 2169 aa11.63□□□□□ -0.55
SREBF1-201ENST00000261646 DEFB135Q30KP9 77 aa11.63□□□□□ -0.55
SREBF1-201ENST00000261646 WFDC10AQ9H1F0 79 aa11.62□□□□□ -0.55
SREBF1-201ENST00000261646 DCHS1Q96JQ0 3298 aa11.62□□□□□ -0.55
SREBF1-201ENST00000261646 FAM218AQ96MZ4 157 aa11.62□□□□□ -0.55
SREBF1-201ENST00000261646 Q6YL49 198 aa11.61□□□□□ -0.55
SREBF1-201ENST00000261646 IGLV4-60A0A075B6I1 120 aa11.61□□□□□ -0.55
SREBF1-201ENST00000261646 SOSTDC1Q6X4U4 206 aa11.61□□□□□ -0.55
SREBF1-201ENST00000261646 ETDCA0A1B0GVM5 59 aa11.61□□□□□ -0.55
SREBF1-201ENST00000261646 NTM-AS1Q6ZSK4 140 aa11.6□□□□□ -0.55
SREBF1-201ENST00000261646 CRYGAP11844 174 aa11.6□□□□□ -0.55
SREBF1-201ENST00000261646 UBE2BP63146 152 aa11.6□□□□□ -0.55
SREBF1-201ENST00000261646 ZNF702PQ9H963 129 aa11.6□□□□□ -0.55
SREBF1-201ENST00000261646 FLNBO75369 2602 aaKnown RBP11.59□□□□□ -0.55
SREBF1-201ENST00000261646 KIR2DL5BQ8NHK3 375 aa11.59□□□□□ -0.55
SREBF1-201ENST00000261646 IGLV5-39A0A0G2JS06 123 aa11.59□□□□□ -0.55
SREBF1-201ENST00000261646 Q8N814 137 aa11.59□□□□□ -0.55
SREBF1-201ENST00000261646 LITAFQ99732 161 aa11.59□□□□□ -0.55
SREBF1-201ENST00000261646 ODF3L2Q3SX64 289 aa11.58□□□□□ -0.56
SREBF1-201ENST00000261646 TRAV7A0A075B6U4 112 aa11.58□□□□□ -0.56
SREBF1-201ENST00000261646 DMDP11532 3685 aa11.58□□□□□ -0.56
SREBF1-201ENST00000261646 SMIM26A0A096LP01 95 aa11.57□□□□□ -0.56
SREBF1-201ENST00000261646 SPART-AS1P0CW21 52 aa11.57□□□□□ -0.56
SREBF1-201ENST00000261646 COL12A1Q99715 3063 aa11.57□□□□□ -0.56
SREBF1-201ENST00000261646 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
SREBF1-201ENST00000261646 C9orf116Q5BN46 136 aaPredicted RBP11.57□□□□□ -0.56
SREBF1-201ENST00000261646 HECTD1Q9ULT8 2610 aa11.56□□□□□ -0.56
SREBF1-201ENST00000261646 A0A087WZ39 114 aa11.56□□□□□ -0.56
SREBF1-201ENST00000261646 KRTAP10-9P60411 292 aa11.56□□□□□ -0.56
SREBF1-201ENST00000261646 C3orf84H3BNL1 204 aa11.56□□□□□ -0.56
SREBF1-201ENST00000261646 BBC3Q96PG8 261 aaPredicted RBP11.56□□□□□ -0.56
SREBF1-201ENST00000261646 NDUFC1O43677 76 aa11.56□□□□□ -0.56
SREBF1-201ENST00000261646 IGHV4-31P0DP07 118 aa11.56□□□□□ -0.56
SREBF1-201ENST00000261646 C1orf158Q8N1D5 194 aa11.56□□□□□ -0.56
SREBF1-201ENST00000261646 TNRC18O15417 2968 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-201ENST00000261646 BRI3O95415 125 aa11.55□□□□□ -0.56
SREBF1-201ENST00000261646 BEAN1Q3B7T3 259 aa11.55□□□□□ -0.56
SREBF1-201ENST00000261646 CD164L2Q6UWJ8 174 aa11.55□□□□□ -0.56
SREBF1-201ENST00000261646 SERP1Q9Y6X1 66 aa11.55□□□□□ -0.56
SREBF1-201ENST00000261646 MP68P56378 58 aa11.54□□□□□ -0.56
SREBF1-201ENST00000261646 Q8IZM0 81 aa11.54□□□□□ -0.56
SREBF1-201ENST00000261646 SMCR5Q8TEV8 140 aa11.54□□□□□ -0.56
SREBF1-201ENST00000261646 MIFP14174 115 aa11.53□□□□□ -0.56
SREBF1-201ENST00000261646 Q8N3U1 123 aa11.53□□□□□ -0.56
SREBF1-201ENST00000261646 FAM19A3Q7Z5A8 133 aa11.52□□□□□ -0.57
SREBF1-201ENST00000261646 DNAJC9-AS1A6NH13 148 aa11.52□□□□□ -0.57
SREBF1-201ENST00000261646 C4orf26Q17RF5 130 aa11.52□□□□□ -0.57
SREBF1-201ENST00000261646 ZNF575Q86XF7 245 aa11.51□□□□□ -0.57
SREBF1-201ENST00000261646 PSCAO43653 123 aa11.5□□□□□ -0.57
SREBF1-201ENST00000261646 A8MTW9 85 aa11.5□□□□□ -0.57
SREBF1-201ENST00000261646 DEFB121Q5J5C9 76 aa11.5□□□□□ -0.57
SREBF1-201ENST00000261646 RPS28P62857 69 aaKnown RBP11.5□□□□□ -0.57
SREBF1-201ENST00000261646 PRR4Q16378 134 aa11.5□□□□□ -0.57
SREBF1-201ENST00000261646 RMI2Q96E14 147 aa11.5□□□□□ -0.57
SREBF1-201ENST00000261646 COL27A1Q8IZC6 1860 aaPredicted RBP11.5□□□□□ -0.57
SREBF1-201ENST00000261646 IGLV5-45A0A087WSX0 123 aa11.49□□□□□ -0.57
SREBF1-201ENST00000261646 UNQ6190/PRO20217Q6UXQ8 127 aa11.49□□□□□ -0.57
SREBF1-201ENST00000261646 V9GYY9 64 aa11.49□□□□□ -0.57
SREBF1-201ENST00000261646 CDK2AP2O75956 126 aa11.49□□□□□ -0.57
SREBF1-201ENST00000261646 ZFHX4Q86UP3 3567 aa11.49□□□□□ -0.57
SREBF1-201ENST00000261646 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.49□□□□□ -0.57
SREBF1-201ENST00000261646 ATP5EP56381 51 aaPredicted RBP11.48□□□□□ -0.57
SREBF1-201ENST00000261646 ZNF843Q8N446 348 aa11.48□□□□□ -0.57
SREBF1-201ENST00000261646 C11orf72Q8NBR9 251 aa11.48□□□□□ -0.57
SREBF1-201ENST00000261646 LAMA5O15230 3695 aa11.47□□□□□ -0.57
SREBF1-201ENST00000261646 USP24Q9UPU5 2620 aa11.46□□□□□ -0.57
SREBF1-201ENST00000261646 LRCOL1A6NCL2 159 aa11.46□□□□□ -0.57
SREBF1-201ENST00000261646 CFAP46Q8IYW2 2715 aa11.46□□□□□ -0.57
SREBF1-201ENST00000261646 COX17Q14061 63 aa11.46□□□□□ -0.58
SREBF1-201ENST00000261646 FLNAP21333 2647 aaKnown RBP11.46□□□□□ -0.58
SREBF1-201ENST00000261646 CYSRT1A8MQ03 144 aa11.46□□□□□ -0.58
SREBF1-201ENST00000261646 CELA1Q9UNI1 258 aa11.46□□□□□ -0.58
SREBF1-201ENST00000261646 ZNF73O43830 326 aaPredicted RBP11.45□□□□□ -0.58
SREBF1-201ENST00000261646 C1orf195Q5TG92 126 aa11.45□□□□□ -0.58
SREBF1-201ENST00000261646 Q6ZVQ6 151 aa11.45□□□□□ -0.58
SREBF1-201ENST00000261646 LINC00482Q8N8I6 264 aa11.45□□□□□ -0.58
SREBF1-201ENST00000261646 PLA2G2AP14555 144 aa11.45□□□□□ -0.58
SREBF1-201ENST00000261646 IGHV3OR16-9A0A0B4J2B5 98 aa11.44□□□□□ -0.58
SREBF1-201ENST00000261646 F8P00451 2351 aa11.44□□□□□ -0.58
SREBF1-201ENST00000261646 C9orf66Q5T8R8 295 aa11.43□□□□□ -0.58
SREBF1-201ENST00000261646 CHD6Q8TD26 2715 aa11.43□□□□□ -0.58
SREBF1-201ENST00000261646 LINC01547P58512 204 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-201ENST00000261646 TRBV10-3A0A0K0K1G6 114 aa11.43□□□□□ -0.58
SREBF1-201ENST00000261646 SPTSSBQ8NFR3 76 aa11.43□□□□□ -0.58
SREBF1-201ENST00000261646 FLNCQ14315 2725 aa11.42□□□□□ -0.58
SREBF1-201ENST00000261646 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.42□□□□□ -0.58
SREBF1-201ENST00000261646 IGKV2-28A0A075B6P5 120 aa11.42□□□□□ -0.58
SREBF1-201ENST00000261646 IGKV2D-28P01615 120 aa11.42□□□□□ -0.58
SREBF1-201ENST00000261646 LYRM9A8MSI8 78 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms