RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 TSPAN13O95857 204 aa11.13□□□□□ -0.63
PAX3-201ENST00000258387 NPSP0C0P6 89 aa11.13□□□□□ -0.63
PAX3-201ENST00000258387 HERVK_113P63121 156 aa11.13□□□□□ -0.63
PAX3-201ENST00000258387 PNRC1Q12796 327 aaPredicted RBP11.13□□□□□ -0.63
PAX3-201ENST00000258387 FAM19A3Q7Z5A8 133 aa11.13□□□□□ -0.63
PAX3-201ENST00000258387 F8VRH5 84 aa11.12□□□□□ -0.63
PAX3-201ENST00000258387 NXT2Q9NPJ8 142 aaKnown RBP11.12□□□□□ -0.63
PAX3-201ENST00000258387 K7EMI3 77 aa11.11□□□□□ -0.63
PAX3-201ENST00000258387 SEC11AP67812 179 aa11.11□□□□□ -0.63
PAX3-201ENST00000258387 PAPPA-AS1Q5QFB9 102 aa11.11□□□□□ -0.63
PAX3-201ENST00000258387 MRPL55Q7Z7F7 128 aaKnown RBP11.1□□□□□ -0.63
PAX3-201ENST00000258387 MUC2Q02817 5179 aa11.1□□□□□ -0.63
PAX3-201ENST00000258387 G0S2P27469 103 aa11.09□□□□□ -0.63
PAX3-201ENST00000258387 KIAA1644Q3SXP7 199 aa11.09□□□□□ -0.63
PAX3-201ENST00000258387 RPL37AP8A6NKH3 93 aa11.08□□□□□ -0.64
PAX3-201ENST00000258387 TOMM6Q96B49 74 aa11.08□□□□□ -0.64
PAX3-201ENST00000258387 TIMM17AQ99595 171 aa11.08□□□□□ -0.64
PAX3-201ENST00000258387 BCE1O60756 84 aa11.07□□□□□ -0.64
PAX3-201ENST00000258387 RPL28P46779 137 aaKnown RBP11.07□□□□□ -0.64
PAX3-201ENST00000258387 SCGB3A1Q96QR1 104 aa11.07□□□□□ -0.64
PAX3-201ENST00000258387 TP73-AS1Q9UF72 201 aa11.07□□□□□ -0.64
PAX3-201ENST00000258387 GAGE10A6NGK3 116 aa11.06□□□□□ -0.64
PAX3-201ENST00000258387 LINC00167Q96N53 147 aa11.06□□□□□ -0.64
PAX3-201ENST00000258387 A0A087X002 238 aa11.05□□□□□ -0.64
PAX3-201ENST00000258387 ADCYAP1P18509 176 aa11.05□□□□□ -0.64
PAX3-201ENST00000258387 CXCL5P42830 114 aa11.05□□□□□ -0.64
PAX3-201ENST00000258387 RAB5BP61020 215 aa11.05□□□□□ -0.64
PAX3-201ENST00000258387 RAB14P61106 215 aa11.05□□□□□ -0.64
PAX3-201ENST00000258387 ERASQ7Z444 233 aa11.05□□□□□ -0.64
PAX3-201ENST00000258387 COX7B2Q8TF08 81 aa11.05□□□□□ -0.64
PAX3-201ENST00000258387 SMIM1B2RUZ4 78 aa11.04□□□□□ -0.64
PAX3-201ENST00000258387 TYMSOSQ8TAI1 123 aa11.04□□□□□ -0.64
PAX3-201ENST00000258387 ANAPC11Q9NYG5 84 aa11.04□□□□□ -0.64
PAX3-201ENST00000258387 CRYGAP11844 174 aa11.03□□□□□ -0.64
PAX3-201ENST00000258387 TINCRA0A1B0GVN0 87 aa11.02□□□□□ -0.65
PAX3-201ENST00000258387 PDZD11Q5EBL8 140 aa11.02□□□□□ -0.65
PAX3-201ENST00000258387 SPINK8P0C7L1 97 aa11.01□□□□□ -0.65
PAX3-201ENST00000258387 CST9LQ9H4G1 147 aa11□□□□□ -0.65
PAX3-201ENST00000258387 UBE2AP49459 152 aa10.99□□□□□ -0.65
PAX3-201ENST00000258387 NKAPP1Q8N9T2 125 aa10.98□□□□□ -0.65
PAX3-201ENST00000258387 IGLV5-45A0A087WSX0 123 aa10.97□□□□□ -0.65
PAX3-201ENST00000258387 SCO1O75880 301 aa10.97□□□□□ -0.65
PAX3-201ENST00000258387 PMVKQ15126 192 aa10.96□□□□□ -0.65
PAX3-201ENST00000258387 IGLV5-37A0A075B6J1 123 aa10.95□□□□□ -0.66
PAX3-201ENST00000258387 IGKV2-28A0A075B6P5 120 aa10.95□□□□□ -0.66
PAX3-201ENST00000258387 IGKV2D-28P01615 120 aa10.95□□□□□ -0.66
PAX3-201ENST00000258387 ATP5LO75964 103 aa10.94□□□□□ -0.66
PAX3-201ENST00000258387 PFN2P35080 140 aa10.94□□□□□ -0.66
PAX3-201ENST00000258387 KRTAP13-2Q52LG2 175 aa10.94□□□□□ -0.66
PAX3-201ENST00000258387 KRTAP13-1Q8IUC0 172 aa10.94□□□□□ -0.66
PAX3-201ENST00000258387 LINC01546A6NGU7 62 aa10.93□□□□□ -0.66
PAX3-201ENST00000258387 LINC01549A6NIU2 74 aa10.93□□□□□ -0.66
PAX3-201ENST00000258387 H3BRM9 83 aa10.93□□□□□ -0.66
PAX3-201ENST00000258387 FA2HQ7L5A8 372 aa10.93□□□□□ -0.66
PAX3-201ENST00000258387 RETNLBQ9BQ08 111 aa10.93□□□□□ -0.66
PAX3-201ENST00000258387 GNB1LQ9BYB4 327 aa10.93□□□□□ -0.66
PAX3-201ENST00000258387 MRPL18Q9H0U6 180 aaKnown RBP10.93□□□□□ -0.66
PAX3-201ENST00000258387 TRAV9-1A0A075B6T8 112 aa10.92□□□□□ -0.66
PAX3-201ENST00000258387 A0A0U1RQV1 116 aa10.92□□□□□ -0.66
PAX3-201ENST00000258387 NDUFA6P56556 154 aa10.92□□□□□ -0.66
PAX3-201ENST00000258387 SMCO4Q9NRQ5 59 aa10.92□□□□□ -0.66
PAX3-201ENST00000258387 S100PP25815 95 aa10.91□□□□□ -0.66
PAX3-201ENST00000258387 CLLU1Q5K131 121 aa10.91□□□□□ -0.66
PAX3-201ENST00000258387 TMEM218A2RU14 115 aa10.9□□□□□ -0.66
PAX3-201ENST00000258387 PRLHP81277 87 aa10.9□□□□□ -0.66
PAX3-201ENST00000258387 FABP9Q0Z7S8 132 aa10.9□□□□□ -0.66
PAX3-201ENST00000258387 FAM229BQ4G0N7 80 aa10.89□□□□□ -0.67
PAX3-201ENST00000258387 LINC00304Q8N9R0 145 aa10.89□□□□□ -0.67
PAX3-201ENST00000258387 IGKV2D-26A0A0A0MRZ7 120 aa10.88□□□□□ -0.67
PAX3-201ENST00000258387 TMEM238C9JI98 176 aa10.88□□□□□ -0.67
PAX3-201ENST00000258387 FAM19A1Q7Z5A9 133 aa10.88□□□□□ -0.67
PAX3-201ENST00000258387 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
PAX3-201ENST00000258387 IGLV5-39A0A0G2JS06 123 aa10.86□□□□□ -0.67
PAX3-201ENST00000258387 IGLC3P0DOY3 106 aa10.86□□□□□ -0.67
PAX3-201ENST00000258387 VPREB1P12018 145 aa10.86□□□□□ -0.67
PAX3-201ENST00000258387 UQCC3Q6UW78 93 aa10.86□□□□□ -0.67
PAX3-201ENST00000258387 ZNF625Q96I27 306 aaPredicted RBP10.86□□□□□ -0.67
PAX3-201ENST00000258387 ERG28Q9UKR5 140 aa10.86□□□□□ -0.67
PAX3-201ENST00000258387 TMEM126AQ9H061 195 aa10.85□□□□□ -0.67
PAX3-201ENST00000258387 ZNF22P17026 224 aaPredicted RBP10.84□□□□□ -0.67
PAX3-201ENST00000258387 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
PAX3-201ENST00000258387 FAT4Q6V0I7 4981 aa10.83□□□□□ -0.68
PAX3-201ENST00000258387 COX19Q49B96 90 aa10.83□□□□□ -0.68
PAX3-201ENST00000258387 M0R378 163 aa10.82□□□□□ -0.68
PAX3-201ENST00000258387 Q8NDZ9 215 aa10.82□□□□□ -0.68
PAX3-201ENST00000258387 SEC11CQ9BY50 192 aa10.82□□□□□ -0.68
PAX3-201ENST00000258387 CDIP1Q9H305 208 aa10.82□□□□□ -0.68
PAX3-201ENST00000258387 IGLV7-46A0A075B6I9 117 aa10.81□□□□□ -0.68
PAX3-201ENST00000258387 A0A096LNJ9 63 aa10.81□□□□□ -0.68
PAX3-201ENST00000258387 COX17Q14061 63 aa10.81□□□□□ -0.68
PAX3-201ENST00000258387 PMCHL1Q16048 86 aa10.81□□□□□ -0.68
PAX3-201ENST00000258387 PLEKHB2Q96CS7 222 aa10.81□□□□□ -0.68
PAX3-201ENST00000258387 CBLN2Q8IUK8 224 aa10.8□□□□□ -0.68
PAX3-201ENST00000258387 LINC00614P0C842 121 aa10.79□□□□□ -0.68
PAX3-201ENST00000258387 TMEM170BQ5T4T1 132 aa10.79□□□□□ -0.68
PAX3-201ENST00000258387 BAGE3Q86Y29 109 aa10.79□□□□□ -0.68
PAX3-201ENST00000258387 C3orf22Q8N5N4 141 aa10.79□□□□□ -0.68
PAX3-201ENST00000258387 URB1-AS1Q96HZ7 61 aa10.79□□□□□ -0.68
PAX3-201ENST00000258387 RPS10P5Q9NQ39 176 aa10.79□□□□□ -0.68
PAX3-201ENST00000258387 MUC17Q685J3 4493 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms