RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 POLQO75417 2590 aa13.7□□□□□ -0.22
PPFIA1-201ENST00000253925 ZNF462Q96JM2 2506 aa13.69□□□□□ -0.22
PPFIA1-201ENST00000253925 C16orf95Q9H693 158 aa13.69□□□□□ -0.22
PPFIA1-201ENST00000253925 MTORP42345 2549 aa13.69□□□□□ -0.22
PPFIA1-201ENST00000253925 IGLV5-39A0A0G2JS06 123 aa13.69□□□□□ -0.22
PPFIA1-201ENST00000253925 SYCNQ0VAF6 134 aa13.69□□□□□ -0.22
PPFIA1-201ENST00000253925 FAM19A3Q7Z5A8 133 aa13.69□□□□□ -0.22
PPFIA1-201ENST00000253925 SOSTDC1Q6X4U4 206 aa13.68□□□□□ -0.22
PPFIA1-201ENST00000253925 NDUFB1O75438 58 aa13.67□□□□□ -0.22
PPFIA1-201ENST00000253925 TRBV7-7A0A0K0K1E9 115 aa13.67□□□□□ -0.22
PPFIA1-201ENST00000253925 KPRPQ5T749 579 aaPredicted RBP13.67□□□□□ -0.22
PPFIA1-201ENST00000253925 PRR4Q16378 134 aa13.66□□□□□ -0.22
PPFIA1-201ENST00000253925 TRAV7A0A075B6U4 112 aa13.66□□□□□ -0.22
PPFIA1-201ENST00000253925 CCKP06307 115 aa13.66□□□□□ -0.22
PPFIA1-201ENST00000253925 CYSRT1A8MQ03 144 aa13.66□□□□□ -0.22
PPFIA1-201ENST00000253925 M0R378 163 aa13.65□□□□□ -0.22
PPFIA1-201ENST00000253925 A0A1B0GUV1 79 aa13.65□□□□□ -0.23
PPFIA1-201ENST00000253925 MKI67P46013 3256 aaKnown RBP13.64□□□□□ -0.23
PPFIA1-201ENST00000253925 A0A087WYN8 130 aa13.63□□□□□ -0.23
PPFIA1-201ENST00000253925 C3orf84H3BNL1 204 aa13.63□□□□□ -0.23
PPFIA1-201ENST00000253925 UNQ6190/PRO20217Q6UXQ8 127 aa13.63□□□□□ -0.23
PPFIA1-201ENST00000253925 UBE2AP49459 152 aa13.62□□□□□ -0.23
PPFIA1-201ENST00000253925 Q8N814 137 aa13.62□□□□□ -0.23
PPFIA1-201ENST00000253925 ZNF73O43830 326 aaPredicted RBP13.62□□□□□ -0.23
PPFIA1-201ENST00000253925 ANKRD17O75179 2603 aaKnown RBP13.62□□□□□ -0.23
PPFIA1-201ENST00000253925 IGLV5-45A0A087WSX0 123 aa13.61□□□□□ -0.23
PPFIA1-201ENST00000253925 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.61□□□□□ -0.23
PPFIA1-201ENST00000253925 LRCOL1A6NCL2 159 aa13.61□□□□□ -0.23
PPFIA1-201ENST00000253925 NTM-AS1Q6ZSK4 140 aa13.59□□□□□ -0.23
PPFIA1-201ENST00000253925 H0Y9J4 135 aa13.58□□□□□ -0.23
PPFIA1-201ENST00000253925 IGHV4-30-4P0DP06 118 aa13.58□□□□□ -0.23
PPFIA1-201ENST00000253925 C9orf116Q5BN46 136 aaPredicted RBP13.58□□□□□ -0.23
PPFIA1-201ENST00000253925 LINC01561Q8N1V8 128 aa13.58□□□□□ -0.23
PPFIA1-201ENST00000253925 IGKV2-24A0A0C4DH68 120 aa13.58□□□□□ -0.24
PPFIA1-201ENST00000253925 LINC00337Q8N6G1 96 aa13.58□□□□□ -0.24
PPFIA1-201ENST00000253925 C14orf177Q52M58 125 aa13.57□□□□□ -0.24
PPFIA1-201ENST00000253925 SBSPONQ8IVN8 264 aa13.57□□□□□ -0.24
PPFIA1-201ENST00000253925 Q9UF83 564 aa13.57□□□□□ -0.24
PPFIA1-201ENST00000253925 A6NED7 52 aa13.56□□□□□ -0.24
PPFIA1-201ENST00000253925 PRR3P79522 188 aaKnown RBP13.56□□□□□ -0.24
PPFIA1-201ENST00000253925 HIGD2AQ9BW72 106 aa13.56□□□□□ -0.24
PPFIA1-201ENST00000253925 LINC00846Q9NV44 126 aa13.56□□□□□ -0.24
PPFIA1-201ENST00000253925 IGHV3OR16-9A0A0B4J2B5 98 aa13.56□□□□□ -0.24
PPFIA1-201ENST00000253925 BRCA2P51587 3418 aa13.55□□□□□ -0.24
PPFIA1-201ENST00000253925 LAMA3Q16787 3333 aa13.55□□□□□ -0.24
PPFIA1-201ENST00000253925 EGFEM1PQ0D2K5 195 aa13.55□□□□□ -0.24
PPFIA1-201ENST00000253925 PRO0628Q9UI54 55 aa13.55□□□□□ -0.24
PPFIA1-201ENST00000253925 MUC4Q99102 2169 aa13.55□□□□□ -0.24
PPFIA1-201ENST00000253925 FAM19A1Q7Z5A9 133 aa13.55□□□□□ -0.24
PPFIA1-201ENST00000253925 TRAV10A0A0B4J240 114 aa13.54□□□□□ -0.24
PPFIA1-201ENST00000253925 C4orf26Q17RF5 130 aa13.54□□□□□ -0.24
PPFIA1-201ENST00000253925 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.54□□□□□ -0.24
PPFIA1-201ENST00000253925 SMR3AQ99954 134 aa13.54□□□□□ -0.24
PPFIA1-201ENST00000253925 WFDC10BQ8IUB3 73 aa13.54□□□□□ -0.24
PPFIA1-201ENST00000253925 IGKV2-28A0A075B6P5 120 aa13.54□□□□□ -0.24
PPFIA1-201ENST00000253925 IGKV2D-28P01615 120 aa13.54□□□□□ -0.24
PPFIA1-201ENST00000253925 DHRS4-AS1Q9P1J3 65 aa13.53□□□□□ -0.24
PPFIA1-201ENST00000253925 PLA2G2AP14555 144 aa13.53□□□□□ -0.24
PPFIA1-201ENST00000253925 FAM30AQ9NZY2 134 aa13.53□□□□□ -0.24
PPFIA1-201ENST00000253925 FHL3Q13643 280 aa13.53□□□□□ -0.24
PPFIA1-201ENST00000253925 CRYGAP11844 174 aa13.53□□□□□ -0.24
PPFIA1-201ENST00000253925 PMAIP1Q13794 54 aa13.52□□□□□ -0.24
PPFIA1-201ENST00000253925 TRBV10-3A0A0K0K1G6 114 aa13.52□□□□□ -0.25
PPFIA1-201ENST00000253925 CELA1Q9UNI1 258 aa13.51□□□□□ -0.25
PPFIA1-201ENST00000253925 IGKV4-1P06312 121 aa13.49□□□□□ -0.25
PPFIA1-201ENST00000253925 Q8N3U1 123 aa13.49□□□□□ -0.25
PPFIA1-201ENST00000253925 B9D2Q9BPU9 175 aa13.49□□□□□ -0.25
PPFIA1-201ENST00000253925 ACANP16112 2415 aa13.48□□□□□ -0.25
PPFIA1-201ENST00000253925 FSHBP01225 129 aa13.47□□□□□ -0.25
PPFIA1-201ENST00000253925 RPS28P62857 69 aaKnown RBP13.47□□□□□ -0.25
PPFIA1-201ENST00000253925 OXLD1Q5BKU9 147 aa13.47□□□□□ -0.25
PPFIA1-201ENST00000253925 WFDC13Q8IUB5 93 aa13.47□□□□□ -0.25
PPFIA1-201ENST00000253925 RETNQ9HD89 108 aa13.47□□□□□ -0.25
PPFIA1-201ENST00000253925 PRYO14603 147 aa13.46□□□□□ -0.25
PPFIA1-201ENST00000253925 TRBV7-6A0A0J9YX20 115 aa13.46□□□□□ -0.25
PPFIA1-201ENST00000253925 LAMA2P24043 3122 aaKnown RBP13.45□□□□□ -0.26
PPFIA1-201ENST00000253925 A0A0J9YWU9 116 aa13.45□□□□□ -0.26
PPFIA1-201ENST00000253925 LITAFQ99732 161 aa13.45□□□□□ -0.26
PPFIA1-201ENST00000253925 PSPHP1O15172 72 aa13.44□□□□□ -0.26
PPFIA1-201ENST00000253925 C6orf223Q8N319 242 aa13.44□□□□□ -0.26
PPFIA1-201ENST00000253925 NANOS2P60321 138 aaKnown RBP13.43□□□□□ -0.26
PPFIA1-201ENST00000253925 LINC00575Q6W349 94 aa13.43□□□□□ -0.26
PPFIA1-201ENST00000253925 SEC61GP60059 68 aa13.42□□□□□ -0.26
PPFIA1-201ENST00000253925 A8MTW9 85 aa13.41□□□□□ -0.26
PPFIA1-201ENST00000253925 RPL37AP8A6NKH3 93 aa13.4□□□□□ -0.26
PPFIA1-201ENST00000253925 TMEM254Q8TBM7 123 aa13.39□□□□□ -0.27
PPFIA1-201ENST00000253925 A0A096LNI7 61 aa13.39□□□□□ -0.27
PPFIA1-201ENST00000253925 LYPD5Q6UWN5 251 aa13.39□□□□□ -0.27
PPFIA1-201ENST00000253925 Q6ZTC4 211 aa13.39□□□□□ -0.27
PPFIA1-201ENST00000253925 FAM218AQ96MZ4 157 aa13.38□□□□□ -0.27
PPFIA1-201ENST00000253925 PRR15LQ9BU68 103 aa13.38□□□□□ -0.27
PPFIA1-201ENST00000253925 C2orf48Q96LS8 159 aa13.37□□□□□ -0.27
PPFIA1-201ENST00000253925 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.36□□□□□ -0.27
PPFIA1-201ENST00000253925 F8WDY8 70 aa13.36□□□□□ -0.27
PPFIA1-201ENST00000253925 Q6ZVQ6 151 aa13.36□□□□□ -0.27
PPFIA1-201ENST00000253925 IL17DQ8TAD2 202 aa13.35□□□□□ -0.27
PPFIA1-201ENST00000253925 EPG5Q9HCE0 2579 aa13.35□□□□□ -0.27
PPFIA1-201ENST00000253925 LINC01547P58512 204 aaPredicted RBP13.35□□□□□ -0.27
PPFIA1-201ENST00000253925 NHLRC4P0CG21 123 aaPredicted RBP13.34□□□□□ -0.27
PPFIA1-201ENST00000253925 ESRGQ1W209 222 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms