RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 DNAL4O96015 105 aa10.6□□□□□ -0.71
EFNB1-201ENST00000204961 A0A087WYN8 130 aa10.6□□□□□ -0.71
EFNB1-201ENST00000204961 LECT2O14960 151 aa10.6□□□□□ -0.71
EFNB1-201ENST00000204961 Q6Q795 121 aa10.59□□□□□ -0.71
EFNB1-201ENST00000204961 IGKV3D-7A0A0C4DH55 119 aa10.59□□□□□ -0.71
EFNB1-201ENST00000204961 A8MTW9 85 aa10.59□□□□□ -0.71
EFNB1-201ENST00000204961 F5H768 121 aa10.59□□□□□ -0.71
EFNB1-201ENST00000204961 EDA2RQ9HAV5 297 aa10.58□□□□□ -0.72
EFNB1-201ENST00000204961 PLAC8L1A1L4L8 177 aa10.58□□□□□ -0.72
EFNB1-201ENST00000204961 COX7A2LO14548 114 aa10.58□□□□□ -0.72
EFNB1-201ENST00000204961 CCL18P55774 89 aa10.58□□□□□ -0.72
EFNB1-201ENST00000204961 TRBV6-8A0A0A6YYG3 113 aa10.57□□□□□ -0.72
EFNB1-201ENST00000204961 IGLV5-39A0A0G2JS06 123 aa10.57□□□□□ -0.72
EFNB1-201ENST00000204961 NCR3O14931 201 aa10.57□□□□□ -0.72
EFNB1-201ENST00000204961 ANGP03950 147 aaKnown RBP10.57□□□□□ -0.72
EFNB1-201ENST00000204961 FHL2Q14192 279 aa10.57□□□□□ -0.72
EFNB1-201ENST00000204961 SMIM11BQ8TCY0 68 aa10.57□□□□□ -0.72
EFNB1-201ENST00000204961 LINC00269Q8N2A0 174 aa10.57□□□□□ -0.72
EFNB1-201ENST00000204961 C16orf74Q96GX8 76 aa10.56□□□□□ -0.72
EFNB1-201ENST00000204961 MGAM2Q2M2H8 2515 aa10.56□□□□□ -0.72
EFNB1-201ENST00000204961 FAM222AQ5U5X8 452 aa10.56□□□□□ -0.72
EFNB1-201ENST00000204961 TRBV10-1A0A0K0K1A3 114 aa10.55□□□□□ -0.72
EFNB1-201ENST00000204961 SDIM1Q6ZPB5 146 aa10.55□□□□□ -0.72
EFNB1-201ENST00000204961 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
EFNB1-201ENST00000204961 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
EFNB1-201ENST00000204961 TENM3Q9P273 2699 aa10.53□□□□□ -0.72
EFNB1-201ENST00000204961 IGLV5-45A0A087WSX0 123 aa10.53□□□□□ -0.72
EFNB1-201ENST00000204961 IGLV1-51P01701 117 aa10.52□□□□□ -0.73
EFNB1-201ENST00000204961 KRTAP10-3P60369 221 aa10.52□□□□□ -0.73
EFNB1-201ENST00000204961 LINC00959A0A1B0GUT2 108 aa10.52□□□□□ -0.73
EFNB1-201ENST00000204961 MALP21145 153 aa10.52□□□□□ -0.73
EFNB1-201ENST00000204961 WFDC9Q8NEX5 89 aa10.52□□□□□ -0.73
EFNB1-201ENST00000204961 C6orf223Q8N319 242 aa10.51□□□□□ -0.73
EFNB1-201ENST00000204961 C19orf73Q9NVV2 129 aa10.51□□□□□ -0.73
EFNB1-201ENST00000204961 A0A087WVE0 104 aa10.5□□□□□ -0.73
EFNB1-201ENST00000204961 TRAV25A0A0B4J276 109 aa10.5□□□□□ -0.73
EFNB1-201ENST00000204961 IGHV3OR16-9A0A0B4J2B5 98 aa10.5□□□□□ -0.73
EFNB1-201ENST00000204961 hADV29S1A0JD25 119 aa10.5□□□□□ -0.73
EFNB1-201ENST00000204961 INAFM1C9JVW0 142 aa10.5□□□□□ -0.73
EFNB1-201ENST00000204961 TRBV7-7A0A0K0K1E9 115 aa10.49□□□□□ -0.73
EFNB1-201ENST00000204961 FAM240AA0A1B0GVK7 77 aa10.48□□□□□ -0.73
EFNB1-201ENST00000204961 TRBV6-4A0A1B0GX49 114 aa10.48□□□□□ -0.73
EFNB1-201ENST00000204961 TIMM17BO60830 172 aa10.48□□□□□ -0.73
EFNB1-201ENST00000204961 CSNK1G2-AS1Q8NCQ2 148 aa10.48□□□□□ -0.73
EFNB1-201ENST00000204961 SS18Q15532 418 aa10.48□□□□□ -0.73
EFNB1-201ENST00000204961 LINC00643Q86TS7 51 aa10.48□□□□□ -0.73
EFNB1-201ENST00000204961 C3orf22Q8N5N4 141 aa10.48□□□□□ -0.73
EFNB1-201ENST00000204961 HIST1H4AP62805 103 aaKnown RBP10.47□□□□□ -0.73
EFNB1-201ENST00000204961 TRAV13-2A0A0B4J235 113 aa10.46□□□□□ -0.73
EFNB1-201ENST00000204961 KRTAP1-1Q07627 177 aa10.46□□□□□ -0.73
EFNB1-201ENST00000204961 IL17DQ8TAD2 202 aa10.46□□□□□ -0.73
EFNB1-201ENST00000204961 XAGE1AQ9HD64 81 aa10.46□□□□□ -0.73
EFNB1-201ENST00000204961 KLK12Q9UKR0 248 aa10.46□□□□□ -0.73
EFNB1-201ENST00000204961 CELA1Q9UNI1 258 aa10.46□□□□□ -0.73
EFNB1-201ENST00000204961 ANK3Q12955 4377 aaKnown RBP10.45□□□□□ -0.74
EFNB1-201ENST00000204961 CSDC2Q9Y534 153 aaKnown RBP10.45□□□□□ -0.74
EFNB1-201ENST00000204961 DAD1P61803 113 aa10.45□□□□□ -0.74
EFNB1-201ENST00000204961 TMEM126AQ9H061 195 aa10.45□□□□□ -0.74
EFNB1-201ENST00000204961 LRRC75A-AS1Q8N1F1 130 aa10.44□□□□□ -0.74
EFNB1-201ENST00000204961 DEFB121Q5J5C9 76 aa10.43□□□□□ -0.74
EFNB1-201ENST00000204961 CHCHD10Q8WYQ3 142 aaPredicted RBP10.43□□□□□ -0.74
EFNB1-201ENST00000204961 CYSTM1Q9H1C7 97 aa10.43□□□□□ -0.74
EFNB1-201ENST00000204961 A0A1B0GX51 115 aa10.43□□□□□ -0.74
EFNB1-201ENST00000204961 ACYP1P07311 99 aa10.43□□□□□ -0.74
EFNB1-201ENST00000204961 C10orf25Q5T742 122 aa10.43□□□□□ -0.74
EFNB1-201ENST00000204961 UNQ6190/PRO20217Q6UXQ8 127 aa10.43□□□□□ -0.74
EFNB1-201ENST00000204961 COPS9Q8WXC6 57 aa10.43□□□□□ -0.74
EFNB1-201ENST00000204961 UQCRQO14949 82 aa10.42□□□□□ -0.74
EFNB1-201ENST00000204961 S100A7L2Q5SY68 101 aa10.42□□□□□ -0.74
EFNB1-201ENST00000204961 FAM19A5Q7Z5A7 132 aaPredicted RBP10.42□□□□□ -0.74
EFNB1-201ENST00000204961 RETNQ9HD89 108 aa10.42□□□□□ -0.74
EFNB1-201ENST00000204961 LY6G6DO95868 133 aa10.42□□□□□ -0.74
EFNB1-201ENST00000204961 C22orf24Q9Y442 160 aa10.42□□□□□ -0.74
EFNB1-201ENST00000204961 A0A087WZ39 114 aa10.41□□□□□ -0.74
EFNB1-201ENST00000204961 TMEM86BQ8N661 226 aa10.41□□□□□ -0.74
EFNB1-201ENST00000204961 PRO0255Q9UI72 69 aa10.41□□□□□ -0.74
EFNB1-201ENST00000204961 CXCL5P42830 114 aa10.41□□□□□ -0.74
EFNB1-201ENST00000204961 HIGD2BQ4VC39 106 aa10.41□□□□□ -0.74
EFNB1-201ENST00000204961 IGHV4-28A0A0C4DH34 117 aa10.41□□□□□ -0.74
EFNB1-201ENST00000204961 REG3AQ06141 175 aa10.41□□□□□ -0.74
EFNB1-201ENST00000204961 RPL18AQ02543 176 aaKnown RBP10.4□□□□□ -0.74
EFNB1-201ENST00000204961 KIR2DL5BQ8NHK3 375 aa10.4□□□□□ -0.74
EFNB1-201ENST00000204961 X6R8D5 127 aa10.4□□□□□ -0.74
EFNB1-201ENST00000204961 C6orf99Q4VX62 202 aa10.4□□□□□ -0.74
EFNB1-201ENST00000204961 LINC00846Q9NV44 126 aa10.4□□□□□ -0.75
EFNB1-201ENST00000204961 INAFM2P0DMQ5 153 aa10.39□□□□□ -0.75
EFNB1-201ENST00000204961 LINC01600Q96MT4 127 aa10.39□□□□□ -0.75
EFNB1-201ENST00000204961 TRACP01848 142 aa10.38□□□□□ -0.75
EFNB1-201ENST00000204961 J3QKU1 62 aa10.38□□□□□ -0.75
EFNB1-201ENST00000204961 HILS1P60008 231 aa10.38□□□□□ -0.75
EFNB1-201ENST00000204961 Q8NDZ9 215 aa10.38□□□□□ -0.75
EFNB1-201ENST00000204961 DSCR8Q96T75 97 aa10.38□□□□□ -0.75
EFNB1-201ENST00000204961 OVOL2Q9BRP0 275 aa10.38□□□□□ -0.75
EFNB1-201ENST00000204961 COX7CP15954 63 aa10.38□□□□□ -0.75
EFNB1-201ENST00000204961 RPL28P46779 137 aaKnown RBP10.38□□□□□ -0.75
EFNB1-201ENST00000204961 IMUPQ9GZP8 106 aa10.37□□□□□ -0.75
EFNB1-201ENST00000204961 IBA57-AS1B1ANH7 110 aa10.36□□□□□ -0.75
EFNB1-201ENST00000204961 OXLD1Q5BKU9 147 aa10.36□□□□□ -0.75
EFNB1-201ENST00000204961 SMIM9A6NGZ8 99 aa10.36□□□□□ -0.75
EFNB1-201ENST00000204961 PRB2P02812 416 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms