RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SS18Q15532 418 aa13.4□□□□□ -0.26
TNFRSF1A-201ENST00000162749 ETDBQ3ZM63 59 aa13.4□□□□□ -0.26
TNFRSF1A-201ENST00000162749 LYSTQ99698 3801 aa13.4□□□□□ -0.26
TNFRSF1A-201ENST00000162749 NDUFA1O15239 70 aa13.39□□□□□ -0.27
TNFRSF1A-201ENST00000162749 TCL1BO95988 128 aa13.39□□□□□ -0.27
TNFRSF1A-201ENST00000162749 SMCPP49901 116 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-201ENST00000162749 MIAQ16674 131 aa13.39□□□□□ -0.27
TNFRSF1A-201ENST00000162749 C15orf53Q8NAA6 179 aa13.39□□□□□ -0.27
TNFRSF1A-201ENST00000162749 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.39□□□□□ -0.27
TNFRSF1A-201ENST00000162749 XCL1P47992 114 aa13.39□□□□□ -0.27
TNFRSF1A-201ENST00000162749 TENM2Q9NT68 2774 aa13.38□□□□□ -0.27
TNFRSF1A-201ENST00000162749 A0A087WZ39 114 aa13.37□□□□□ -0.27
TNFRSF1A-201ENST00000162749 PRR34Q9NV39 138 aa13.37□□□□□ -0.27
TNFRSF1A-201ENST00000162749 KLK12Q9UKR0 248 aa13.37□□□□□ -0.27
TNFRSF1A-201ENST00000162749 ERG28Q9UKR5 140 aa13.37□□□□□ -0.27
TNFRSF1A-201ENST00000162749 TIMM17BO60830 172 aa13.36□□□□□ -0.27
TNFRSF1A-201ENST00000162749 LYRM7Q5U5X0 104 aa13.36□□□□□ -0.27
TNFRSF1A-201ENST00000162749 NPC2P61916 151 aa13.36□□□□□ -0.27
TNFRSF1A-201ENST00000162749 C5orf38Q86SI9 138 aa13.36□□□□□ -0.27
TNFRSF1A-201ENST00000162749 IGLV10-54A0A075B6I4 117 aa13.35□□□□□ -0.27
TNFRSF1A-201ENST00000162749 H7C2G1 150 aa13.35□□□□□ -0.27
TNFRSF1A-201ENST00000162749 NHLRC4P0CG21 123 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1A-201ENST00000162749 DYNC2H1Q8NCM8 4307 aaKnown RBP13.35□□□□□ -0.27
TNFRSF1A-201ENST00000162749 TRBV20-1A0A075B6N2 111 aa13.35□□□□□ -0.27
TNFRSF1A-201ENST00000162749 DAND5Q8N907 189 aa13.35□□□□□ -0.27
TNFRSF1A-201ENST00000162749 Q9H8V8 135 aa13.35□□□□□ -0.27
TNFRSF1A-201ENST00000162749 DNAH7Q8WXX0 4024 aa13.35□□□□□ -0.27
TNFRSF1A-201ENST00000162749 CHCHD10Q8WYQ3 142 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1A-201ENST00000162749 SCGB1C2P0DMR2 95 aa13.33□□□□□ -0.27
TNFRSF1A-201ENST00000162749 CD164L2Q6UWJ8 174 aa13.33□□□□□ -0.28
TNFRSF1A-201ENST00000162749 ENHOQ6UWT2 76 aa13.33□□□□□ -0.28
TNFRSF1A-201ENST00000162749 CKS1BP61024 79 aa13.32□□□□□ -0.28
TNFRSF1A-201ENST00000162749 ZNF625Q96I27 306 aaPredicted RBP13.32□□□□□ -0.28
TNFRSF1A-201ENST00000162749 FBN3Q75N90 2809 aa13.3□□□□□ -0.28
TNFRSF1A-201ENST00000162749 IFITM1P13164 125 aa13.3□□□□□ -0.28
TNFRSF1A-201ENST00000162749 LINC01556Q5JQF7 62 aa13.3□□□□□ -0.28
TNFRSF1A-201ENST00000162749 LINC00588Q9Y4M8 146 aa13.3□□□□□ -0.28
TNFRSF1A-201ENST00000162749 COX7B2Q8TF08 81 aa13.29□□□□□ -0.28
TNFRSF1A-201ENST00000162749 UBE2WQ96B02 151 aa13.29□□□□□ -0.28
TNFRSF1A-201ENST00000162749 TOMM7Q9P0U1 55 aa13.29□□□□□ -0.28
TNFRSF1A-201ENST00000162749 CRPP02741 224 aa13.29□□□□□ -0.28
TNFRSF1A-201ENST00000162749 Q1RN00 199 aa13.29□□□□□ -0.28
TNFRSF1A-201ENST00000162749 CIRBPQ14011 172 aaKnown RBP13.28□□□□□ -0.28
TNFRSF1A-201ENST00000162749 FOXI1Q12951 378 aa13.28□□□□□ -0.28
TNFRSF1A-201ENST00000162749 TRBV30A0A0K0K1B3 111 aa13.27□□□□□ -0.28
TNFRSF1A-201ENST00000162749 A0A0U1RRA0 63 aa13.27□□□□□ -0.28
TNFRSF1A-201ENST00000162749 COX7A2LO14548 114 aa13.27□□□□□ -0.28
TNFRSF1A-201ENST00000162749 TRIAP1O43715 76 aa13.27□□□□□ -0.28
TNFRSF1A-201ENST00000162749 LINC01561Q8N1V8 128 aa13.27□□□□□ -0.28
TNFRSF1A-201ENST00000162749 LINC00308Q8TCZ7 52 aa13.27□□□□□ -0.28
TNFRSF1A-201ENST00000162749 PLECQ15149 4684 aaKnown RBP13.27□□□□□ -0.29
TNFRSF1A-201ENST00000162749 CCL18P55774 89 aa13.27□□□□□ -0.29
TNFRSF1A-201ENST00000162749 DNAH10OSP0CZ25 163 aa13.26□□□□□ -0.29
TNFRSF1A-201ENST00000162749 SOSTDC1Q6X4U4 206 aa13.25□□□□□ -0.29
TNFRSF1A-201ENST00000162749 TRAV8-4A0A0B4J246 113 aa13.25□□□□□ -0.29
TNFRSF1A-201ENST00000162749 TGP01266 2768 aa13.24□□□□□ -0.29
TNFRSF1A-201ENST00000162749 STARD9Q9P2P6 4700 aa13.24□□□□□ -0.29
TNFRSF1A-201ENST00000162749 HERV-K104P63124 156 aa13.23□□□□□ -0.29
TNFRSF1A-201ENST00000162749 MALP21145 153 aa13.23□□□□□ -0.29
TNFRSF1A-201ENST00000162749 Q8IZM0 81 aa13.23□□□□□ -0.29
TNFRSF1A-201ENST00000162749 MEIG1Q5JSS6 88 aa13.22□□□□□ -0.29
TNFRSF1A-201ENST00000162749 DNAH1Q9P2D7 4330 aa13.22□□□□□ -0.29
TNFRSF1A-201ENST00000162749 C9JAW5 83 aa13.21□□□□□ -0.29
TNFRSF1A-201ENST00000162749 TEN1Q86WV5 123 aa13.21□□□□□ -0.29
TNFRSF1A-201ENST00000162749 CARD19Q96LW7 228 aa13.21□□□□□ -0.29
TNFRSF1A-201ENST00000162749 RPL13AP40429 203 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-201ENST00000162749 C6orf226Q5I0X4 101 aa13.21□□□□□ -0.29
TNFRSF1A-201ENST00000162749 UPK3BQ9BT76 320 aa13.21□□□□□ -0.29
TNFRSF1A-201ENST00000162749 SLC25A20O43772 301 aa13.2□□□□□ -0.3
TNFRSF1A-201ENST00000162749 ATXN8Q156A1 80 aa13.2□□□□□ -0.3
TNFRSF1A-201ENST00000162749 KIAA0087Q14695 138 aa13.2□□□□□ -0.3
TNFRSF1A-201ENST00000162749 APLNQ9ULZ1 77 aa13.2□□□□□ -0.3
TNFRSF1A-201ENST00000162749 KRTAP26-1Q6PEX3 210 aa13.19□□□□□ -0.3
TNFRSF1A-201ENST00000162749 LINC01620Q4KN68 170 aa13.19□□□□□ -0.3
TNFRSF1A-201ENST00000162749 ANKRD29Q8N6D5 301 aa13.19□□□□□ -0.3
TNFRSF1A-201ENST00000162749 CDIP1Q9H305 208 aa13.18□□□□□ -0.3
TNFRSF1A-201ENST00000162749 C2orf82Q6UX34 121 aa13.17□□□□□ -0.3
TNFRSF1A-201ENST00000162749 M0QXV9 152 aa13.16□□□□□ -0.3
TNFRSF1A-201ENST00000162749 PPDPFLQ8WWR9 84 aa13.16□□□□□ -0.3
TNFRSF1A-201ENST00000162749 NUPR2A6NF83 97 aa13.16□□□□□ -0.3
TNFRSF1A-201ENST00000162749 C1orf43Q9BWL3 253 aa13.16□□□□□ -0.3
TNFRSF1A-201ENST00000162749 KLK5Q9Y337 293 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-201ENST00000162749 COPS9Q8WXC6 57 aa13.15□□□□□ -0.31
TNFRSF1A-201ENST00000162749 CLEC2BQ92478 149 aa13.15□□□□□ -0.31
TNFRSF1A-201ENST00000162749 COX6CP09669 75 aa13.14□□□□□ -0.31
TNFRSF1A-201ENST00000162749 CFAP161Q6P656 301 aa13.14□□□□□ -0.31
TNFRSF1A-201ENST00000162749 PPDPFQ9H3Y8 114 aa13.14□□□□□ -0.31
TNFRSF1A-201ENST00000162749 IBA57-AS1B1ANH7 110 aa13.13□□□□□ -0.31
TNFRSF1A-201ENST00000162749 MT-ATP8P03928 68 aa13.13□□□□□ -0.31
TNFRSF1A-201ENST00000162749 LINC01600Q96MT4 127 aa13.13□□□□□ -0.31
TNFRSF1A-201ENST00000162749 Q9HAA7 133 aa13.13□□□□□ -0.31
TNFRSF1A-201ENST00000162749 IGKV2D-24A0A075B6R9 120 aa13.13□□□□□ -0.31
TNFRSF1A-201ENST00000162749 CXCL5P42830 114 aa13.13□□□□□ -0.31
TNFRSF1A-201ENST00000162749 SPAG11BQ08648 103 aa13.12□□□□□ -0.31
TNFRSF1A-201ENST00000162749 MIR7-3HGQ8N6C7 128 aa13.12□□□□□ -0.31
TNFRSF1A-201ENST00000162749 TRBV10-2A0A0K0K1G8 114 aa13.12□□□□□ -0.31
TNFRSF1A-201ENST00000162749 XGP55808 180 aa13.12□□□□□ -0.31
TNFRSF1A-201ENST00000162749 LST1O00453 97 aa13.11□□□□□ -0.31
TNFRSF1A-201ENST00000162749 LINC00526Q96FQ7 95 aa13.11□□□□□ -0.31
TNFRSF1A-201ENST00000162749 C6orf223Q8N319 242 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms