RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 LRRC75A-AS1Q8N1F1 130 aa9.77□□□□□ -0.84
USH1C-201ENST00000005226 C19orf73Q9NVV2 129 aa9.77□□□□□ -0.84
USH1C-201ENST00000005226 LINC00959A0A1B0GUT2 108 aa9.77□□□□□ -0.85
USH1C-201ENST00000005226 LINC00846Q9NV44 126 aa9.77□□□□□ -0.85
USH1C-201ENST00000005226 A0A087WZ39 114 aa9.76□□□□□ -0.85
USH1C-201ENST00000005226 C3orf22Q8N5N4 141 aa9.76□□□□□ -0.85
USH1C-201ENST00000005226 A0A087WVE0 104 aa9.76□□□□□ -0.85
USH1C-201ENST00000005226 IBA57-AS1B1ANH7 110 aa9.76□□□□□ -0.85
USH1C-201ENST00000005226 FAM110AQ9BQ89 295 aa9.75□□□□□ -0.85
USH1C-201ENST00000005226 OVOL2Q9BRP0 275 aa9.75□□□□□ -0.85
USH1C-201ENST00000005226 LINC01006Q8NI28 216 aa9.74□□□□□ -0.85
USH1C-201ENST00000005226 H0YGX0 51 aa9.73□□□□□ -0.85
USH1C-201ENST00000005226 GYPEP15421 78 aa9.73□□□□□ -0.85
USH1C-201ENST00000005226 Q8N3U1 123 aa9.73□□□□□ -0.85
USH1C-201ENST00000005226 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
USH1C-201ENST00000005226 IGLV1-51P01701 117 aa9.72□□□□□ -0.85
USH1C-201ENST00000005226 UQCRQO14949 82 aa9.71□□□□□ -0.85
USH1C-201ENST00000005226 CXCL5P42830 114 aa9.71□□□□□ -0.85
USH1C-201ENST00000005226 TMEM126AQ9H061 195 aa9.71□□□□□ -0.85
USH1C-201ENST00000005226 CYSTM1Q9H1C7 97 aa9.71□□□□□ -0.85
USH1C-201ENST00000005226 IGLV10-54A0A075B6I4 117 aa9.71□□□□□ -0.86
USH1C-201ENST00000005226 C9orf116Q5BN46 136 aaPredicted RBP9.71□□□□□ -0.86
USH1C-201ENST00000005226 C2orf48Q96LS8 159 aa9.71□□□□□ -0.86
USH1C-201ENST00000005226 SS18Q15532 418 aa9.7□□□□□ -0.86
USH1C-201ENST00000005226 TMEM86BQ8N661 226 aa9.7□□□□□ -0.86
USH1C-201ENST00000005226 RNASE1P07998 156 aaKnown RBP9.7□□□□□ -0.86
USH1C-201ENST00000005226 LINC00526Q96FQ7 95 aa9.7□□□□□ -0.86
USH1C-201ENST00000005226 VWFP04275 2813 aa9.7□□□□□ -0.86
USH1C-201ENST00000005226 LOC107984640A0A0U1RRK4 108 aa9.69□□□□□ -0.86
USH1C-201ENST00000005226 DEFB4AO15263 64 aa9.69□□□□□ -0.86
USH1C-201ENST00000005226 OBSCN-AS1Q96MR7 158 aa9.69□□□□□ -0.86
USH1C-201ENST00000005226 hADV29S1A0JD25 119 aa9.69□□□□□ -0.86
USH1C-201ENST00000005226 COX7CP15954 63 aa9.69□□□□□ -0.86
USH1C-201ENST00000005226 NANOS2P60321 138 aaKnown RBP9.69□□□□□ -0.86
USH1C-201ENST00000005226 WFDC9Q8NEX5 89 aa9.69□□□□□ -0.86
USH1C-201ENST00000005226 A0A1B0GX51 115 aa9.68□□□□□ -0.86
USH1C-201ENST00000005226 ORMDL1Q9P0S3 153 aa9.68□□□□□ -0.86
USH1C-201ENST00000005226 LINC00269Q8N2A0 174 aa9.67□□□□□ -0.86
USH1C-201ENST00000005226 ZNF843Q8N446 348 aa9.67□□□□□ -0.86
USH1C-201ENST00000005226 HIST1H4AP62805 103 aaKnown RBP9.67□□□□□ -0.86
USH1C-201ENST00000005226 Q8NDZ9 215 aa9.67□□□□□ -0.86
USH1C-201ENST00000005226 ITPR2Q14571 2701 aa9.67□□□□□ -0.86
USH1C-201ENST00000005226 LINC01561Q8N1V8 128 aa9.66□□□□□ -0.86
USH1C-201ENST00000005226 LY6G6DO95868 133 aa9.66□□□□□ -0.86
USH1C-201ENST00000005226 CMC4P56277 68 aaPredicted RBP9.66□□□□□ -0.86
USH1C-201ENST00000005226 HILS1P60008 231 aa9.65□□□□□ -0.86
USH1C-201ENST00000005226 HIVEP2P31629 2446 aa9.65□□□□□ -0.87
USH1C-201ENST00000005226 RPL18AQ02543 176 aaKnown RBP9.64□□□□□ -0.87
USH1C-201ENST00000005226 Q6JHZ5 121 aa9.64□□□□□ -0.87
USH1C-201ENST00000005226 ATOX1O00244 68 aa9.64□□□□□ -0.87
USH1C-201ENST00000005226 Q8IZM0 81 aa9.64□□□□□ -0.87
USH1C-201ENST00000005226 TENM4Q6N022 2769 aa9.64□□□□□ -0.87
USH1C-201ENST00000005226 CFAP161Q6P656 301 aa9.63□□□□□ -0.87
USH1C-201ENST00000005226 Q8N814 137 aa9.63□□□□□ -0.87
USH1C-201ENST00000005226 LINC00482Q8N8I6 264 aa9.63□□□□□ -0.87
USH1C-201ENST00000005226 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
USH1C-201ENST00000005226 ANK3Q12955 4377 aaKnown RBP9.62□□□□□ -0.87
USH1C-201ENST00000005226 CCKP06307 115 aa9.62□□□□□ -0.87
USH1C-201ENST00000005226 SPATA3Q8NHX4 192 aa9.62□□□□□ -0.87
USH1C-201ENST00000005226 C6orf223Q8N319 242 aa9.62□□□□□ -0.87
USH1C-201ENST00000005226 USP17L23D6RBM5 183 aa9.61□□□□□ -0.87
USH1C-201ENST00000005226 ANGP03950 147 aaKnown RBP9.61□□□□□ -0.87
USH1C-201ENST00000005226 C6orf99Q4VX62 202 aa9.61□□□□□ -0.87
USH1C-201ENST00000005226 CHCHD10Q8WYQ3 142 aaPredicted RBP9.61□□□□□ -0.87
USH1C-201ENST00000005226 X6R8D5 127 aa9.61□□□□□ -0.87
USH1C-201ENST00000005226 PDZD2O15018 2839 aa9.61□□□□□ -0.87
USH1C-201ENST00000005226 A0A1B0GUV1 79 aa9.61□□□□□ -0.87
USH1C-201ENST00000005226 C10orf25Q5T742 122 aa9.6□□□□□ -0.87
USH1C-201ENST00000005226 FAM19A1Q7Z5A9 133 aa9.6□□□□□ -0.87
USH1C-201ENST00000005226 KIR2DL5BQ8NHK3 375 aa9.6□□□□□ -0.87
USH1C-201ENST00000005226 CRYGAP11844 174 aa9.6□□□□□ -0.87
USH1C-201ENST00000005226 KRTAP10-3P60369 221 aa9.6□□□□□ -0.87
USH1C-201ENST00000005226 KRTAP1-1Q07627 177 aa9.6□□□□□ -0.87
USH1C-201ENST00000005226 PRO0255Q9UI72 69 aa9.6□□□□□ -0.87
USH1C-201ENST00000005226 TRAV23DV6A0A075B6W5 121 aa9.58□□□□□ -0.88
USH1C-201ENST00000005226 UNQ6190/PRO20217Q6UXQ8 127 aa9.58□□□□□ -0.88
USH1C-201ENST00000005226 LINC00612Q8N6U2 182 aa9.58□□□□□ -0.88
USH1C-201ENST00000005226 REG3AQ06141 175 aa9.57□□□□□ -0.88
USH1C-201ENST00000005226 CD164L2Q6UWJ8 174 aa9.57□□□□□ -0.88
USH1C-201ENST00000005226 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
USH1C-201ENST00000005226 LINC00167Q96N53 147 aa9.57□□□□□ -0.88
USH1C-201ENST00000005226 C16orf95Q9H693 158 aa9.57□□□□□ -0.88
USH1C-201ENST00000005226 SERP2Q8N6R1 65 aa9.57□□□□□ -0.88
USH1C-201ENST00000005226 M0R2N4 97 aa9.56□□□□□ -0.88
USH1C-201ENST00000005226 DEFB135Q30KP9 77 aa9.56□□□□□ -0.88
USH1C-201ENST00000005226 S100A7L2Q5SY68 101 aa9.56□□□□□ -0.88
USH1C-201ENST00000005226 SMR3AQ99954 134 aa9.56□□□□□ -0.88
USH1C-201ENST00000005226 TMEM256-PLSCR3K7ERE1 68 aa9.55□□□□□ -0.88
USH1C-201ENST00000005226 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
USH1C-201ENST00000005226 HTN3P15516 51 aa9.55□□□□□ -0.88
USH1C-201ENST00000005226 JMJD7-PLA2G4BH0Y9G9 81 aa9.54□□□□□ -0.88
USH1C-201ENST00000005226 TENM1Q9UKZ4 2725 aa9.53□□□□□ -0.88
USH1C-201ENST00000005226 NDUFC2O95298 119 aa9.53□□□□□ -0.88
USH1C-201ENST00000005226 FAM19A5Q7Z5A7 132 aaPredicted RBP9.53□□□□□ -0.88
USH1C-201ENST00000005226 DSCR8Q96T75 97 aa9.53□□□□□ -0.88
USH1C-201ENST00000005226 LINC00575Q6W349 94 aa9.52□□□□□ -0.89
USH1C-201ENST00000005226 CELA1Q9UNI1 258 aa9.52□□□□□ -0.89
USH1C-201ENST00000005226 NOTCH2Q04721 2471 aa9.52□□□□□ -0.89
USH1C-201ENST00000005226 GHRHP01286 108 aa9.52□□□□□ -0.89
USH1C-201ENST00000005226 J3KT08 172 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms