RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 A230072I06RikQ3UUJ8 172 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Tmem101Q91VP7 257 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ncor1Q60974 2453 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ighv1-58A0A075B5W9 117 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Tnfsf15Q5UBV8 252 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Glrx5Q80Y14 152 aa9.6□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Prss32E9Q409 334 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 P01812 117 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 NrgnP60761 78 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Olfr1404Q8VGE1 313 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Trav6-4A0A075B6B4 115 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 P01788 123 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 P01802 115 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 F930015N05RikQ8C3A3 210 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Fam241aQ9CZL2 131 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Mrps11Q9DCA2 191 aaKnown RBP9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm45753A0A1C7CYU8 86 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 4931422A03RikA2BHN9 113 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Rnf212F6TQD1 307 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Erdr1J3QMM0 206 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Q4KKZ1 196 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 EtdQ80SW5 59 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Chchd1Q9CQA6 118 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ighv1-15A0A0A6YXA5 117 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Gm12888Q3UW77 119 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Olfr1419Q7TQS2 343 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Fmc1Q9CR13 113 aa9.59□□□□□ -0.87
Pcif1-201ENSMUST00000041643 Ighv1-55A0A075B5W6 117 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Nsun4C4P6S0 806 aaKnown RBP9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Ovol1Q9WTJ2 267 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gng4P50153 75 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Acrv1P50289 261 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Defa6P50704 93 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Mogat1Q91ZV4 335 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Tmem190Q9D2E9 166 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Cnot1Q6ZQ08 2375 aaKnown RBP9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Olfr779E9PUS9 130 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Spcs1Q9D958 161 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Golgb1E9PVZ8 3238 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Defa34D3Z0J0 93 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Ascl2O35885 263 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Pax1P09084 446 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gstp2P46425 210 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Rplp1P47955 114 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 B020031M17RikQ3UT11 173 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Poc1aQ8JZX3 405 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Carhsp1Q9CR86 148 aa9.58□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Dock7Q8R1A4 2130 aaKnown RBP9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Thy1P01831 162 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 P18528 98 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Atp5lQ9CPQ8 103 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Immp1lQ9CQU8 166 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Necap2Q9D1J1 266 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Fer1l4A3KGK3 1992 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gm9376G3UW68 176 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Hspb8Q9JK92 196 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Igkv4-90A0A075B5L3 117 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Fbxl7Q5BJ29 491 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Sox21Q811W0 276 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Abca7Q91V24 2159 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gm29644A0A087WPG2 191 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Defa-rs2P17534 91 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Vmn1r216Q8R257 298 aa9.57□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gm21616B6ZB74 166 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Tmem170bP86050 132 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 LfngO09010 378 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Mbd3l2Q3UXB0 228 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 C1ql4Q4ZJM9 238 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 D630044L22RikQ8C701 164 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gdf15Q9Z0J7 303 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 SrcapA0A087WQ44 3271 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Myo7bQ99MZ6 2113 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Olfr235E9Q9Z6 312 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gm20708H3BKF4 155 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Sap30O88574 220 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Higd1bQ99JY6 98 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Wnk2Q3UH66 2149 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Defa30E9QPZ2 93 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 4930583I09RikQ9D2E3 102 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Tmem89Q9DA04 169 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Frem1Q684R7 2191 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Cdx1P18111 268 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Defb18Q30KP5 85 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 OstcQ78XF5 149 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 SelenokQ9JLJ1 94 aa9.56□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Cdkn2aQ64364 169 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Rnf126Q91YL2 313 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Tet2Q4JK59 1912 aaKnown RBP9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Trbv1A0A0B4J1G7 116 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Myod1P10085 318 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 SbpP15501 199 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Ss18Q62280 418 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 QrfpQ8CE23 124 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Ormdl3Q9CPZ6 153 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Ighv14-1A0A075B5R4 117 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Gm17732E9Q5I2 61 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Prok1Q14A28 105 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 Fam213bQ9DB60 201 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 MNCb-2875Q9DCB3 74 aa9.55□□□□□ -0.88
Pcif1-201ENSMUST00000041643 CtsbP10605 339 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 153.4 ms