RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Trav9-1A0A075B601 112 aa9.24□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Trdv2-1A0A0G2JGB9 116 aa9.24□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Trdv2-2Q5R1A4 116 aa9.24□□□□□ -0.93
Topbp1-201ENSMUST00000035164 COA4Q8BT51 87 aa9.24□□□□□ -0.93
Topbp1-201ENSMUST00000035164 C1qtnf5Q8K479 243 aa9.24□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Spry4Q9WTP2 300 aa9.24□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Smim6Q3U0I6 56 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Sh3bgrl2Q8BG73 107 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Rnf212F6TQD1 307 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Gm12830F6XVH0 157 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Pax8Q00288 457 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Klk13Q8CGR6 276 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Tmed6Q9CQG0 239 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 P2ry6Q9ERK9 328 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Olfr976Q8VF15 326 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Olfr481Q8VGI5 312 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Gm17430F6RSK3 157 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Cd52Q64389 74 aa9.23□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Trav6d-3A0A075B6B3 112 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Ighv9-2A0A0B4J1J4 117 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Rpl27aP14115 148 aaKnown RBP9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Trav6-3Q5R1E6 112 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Hcfc2Q9D968 241 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 KalrnA2CG49 2964 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 P01655 112 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Ca1P13634 261 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Hif1anQ8BLR9 349 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Lypd6Q8BPP5 171 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Siglec12Q91Y57 467 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Col13a1Q9R1N9 751 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 OtoglF7A4A7 2325 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Dkk1O54908 272 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Wt1P22561 449 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Olfr16Q62007 309 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Il25Q8VHH8 169 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Psmg3Q9CZH3 122 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Vmn1r60G3UY47 300 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Olfr433Q7TRV9 314 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Tmem97Q8VD00 176 aa9.22□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Igkv4-80A0A075B5L7 116 aa9.21□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Tcrg-C2A0A075B5Z2 167 aa9.21□□□□□ -0.93
Topbp1-201ENSMUST00000035164 P01853 167 aa9.21□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Snx22Q8C084 192 aa9.21□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Cd209gD3Z5D4 194 aa9.21□□□□□ -0.93
Topbp1-201ENSMUST00000035164 A930003A15RikQ3U552 87 aa9.21□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Gatad1Q920S3 266 aa9.21□□□□□ -0.93
Topbp1-201ENSMUST00000035164 Gm10036E9PYL9 178 aaKnown RBP9.21□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Prr23a3Q9CWP9 254 aa9.21□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Tmem178aQ9CZ16 297 aa9.21□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Znf385cA2A5E6 429 aa9.21□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Ly6c1P0CW02 131 aa9.21□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Wnt5bP22726 359 aa9.21□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Pcp4P63054 62 aa9.21□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Nat6Q9R123 314 aa9.21□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Wdr90Q6ZPG2 1874 aa9.21□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Trbv26A0A0B4J1P5 115 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 BC030500E9Q6W0 185 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Mfge8P21956 463 aaKnown RBP9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Cacng7P62956 275 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Olfr1367Q8VFG2 316 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 SrfQ9JM73 504 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Sptbn4E9PX29 2561 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Trav12-3A0A075B648 115 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Ighv8-6A0A0A6YXA3 118 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Wnt2P21552 360 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Olfr982Q8VGB3 321 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Wnk1P83741 2377 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Ascl5M0QWB7 188 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Loxl2P58022 776 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Fxyd7P59648 80 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Pxt1Q8K459 51 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Mogat1Q91ZV4 335 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 GlmpQ9JHJ3 404 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Hspb8Q9JK92 196 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Tns1E9Q0S6 1888 aaKnown RBP9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Cdkn1bP46414 197 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Fbln7Q501P1 440 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Htr1dQ61224 374 aa9.2□□□□□ -0.94
Topbp1-201ENSMUST00000035164 SrstQ06666 185 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Cks1brtQ3UNC9 96 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Mcrip2Q9CQB2 160 aaKnown RBP9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Rnf125Q9D9R0 233 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 P01793 123 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Trav9d-1A0A075B699 112 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Gm45753A0A1C7CYU8 86 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Gm10271F6WY25 52 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 H3BKT1 185 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Gfra1P97785 468 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Slc35d2Q762D5 326 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Tspo2Q9CRZ8 162 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Erg28Q9ERY9 140 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Zfp493E9Q1L8 384 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Spcs1Q9D958 161 aa9.19□□□□□ -0.94
Topbp1-201ENSMUST00000035164 3110021N24RikJ3QMN2 152 aa9.18□□□□□ -0.94
Topbp1-201ENSMUST00000035164 P01736 120 aa9.18□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Defa3P28310 93 aa9.18□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Defa10P50708 93 aa9.18□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Defa15P50713 93 aa9.18□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Ssbp4Q3U4B1 363 aa9.18□□□□□ -0.94
Topbp1-201ENSMUST00000035164 Ormdl3Q9CPZ6 153 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 78.9 ms