RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Rab1bQ9D1G1 201 aa13.89□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Igkv9-123A0A140T8N8 117 aa13.89□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Hoxb2P0C1T1 354 aa13.89□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Spink10Q8CAC8 162 aa13.89□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Tmem101Q91VP7 257 aa13.89□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Mrpl32Q9DCI9 187 aaKnown RBP13.89□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Vmn1r216Q8R257 298 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Heatr5bQ8C547 2070 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gm2381G3UY53 305 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 CtsbP10605 339 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gpx1P11352 201 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 H2afb1Q9CQ70 111 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gm11232Q5SPI8 295 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Sp9Q64HY3 484 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Nat6Q9R123 314 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Ralgapa1Q6GYP7 2035 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gm15128A2ADW8 449 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Q8VE95 218 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Smim20D3Z7Q2 69 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 P01638 115 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Rhno1Q8K3A4 235 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Q8R092 253 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gtsf1lQ9CWD0 151 aa13.88□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Trdv4Q5R1A3 115 aa13.87□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Q9D8L0 127 aa13.87□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Pcdh15Q99PJ1 1943 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Ucp1P12242 307 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Plac1Q9JI83 173 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Ms4a8Q99N10 290 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Rnase6Q9D244 153 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gm29423A0A087WRM1 55 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gm10912Q3UXH0 145 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Wipf2Q6PEV3 440 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gm10118Q8C8J5 116 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gm37388A0A0A6YY46 143 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Zfp976E9Q981 636 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Ca5aP23589 299 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Hist1h4aP62806 103 aaKnown RBP13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Zglp1Q1WG82 266 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Iah1Q9DB29 249 aa13.86□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Hbb-b2P02089 147 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Dmrt3Q80WT2 476 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Q8BG31 207 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Reg4Q9D8G5 157 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Tm2d3Q8BJ83 261 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Pnrc2Q9CR73 140 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Egr4Q9WUF2 478 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 1700031F05RikB1AX30 191 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Snrnp200Q6P4T2 2136 aaKnown RBP13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Pax9P47242 342 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Dennd4aE9Q8V6 1869 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Adrb3P25962 400 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Fxyd7P59648 80 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Sumo2P61957 95 aaKnown RBP13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gm4894Q8CA09 118 aa13.85□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Snrnp40Q6PE01 358 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gm10306Q9CUK2 115 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 YrdcQ3U5F4 280 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Ascl5M0QWB7 188 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 MycbQ6P8Z1 170 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Klk13Q8CGR6 276 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Fbln5Q9WVH9 448 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Trbv3A0A0A6YYE2 117 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Prss46Q5M8S2 314 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Ubald2Q8BQH4 164 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Ndufc2Q9CQ54 120 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Dnase2bQ9QY48 354 aa13.84□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Thap8E9Q695 213 aa13.83□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Loxl2P58022 776 aa13.83□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Insig2Q91WG1 225 aa13.83□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Ormdl2Q9CQZ0 153 aa13.83□□□□□ -0.19
Col17a1-201ENSMUST00000026045 Gm9920D3YVZ2 140 aa13.83□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Olfr761Q7TRJ0 323 aa13.83□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Trav2Q5R1I9 109 aa13.83□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Prss58Q8BW11 241 aa13.83□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ndufa2Q9CQ75 99 aa13.82□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Cacna1iE9Q7P2 2199 aa13.82□□□□□ -0.2
Col17a1-201ENSMUST00000026045 ApohQ01339 345 aa13.82□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Igll1P20764 209 aa13.82□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Cdkn1bP46414 197 aa13.82□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Prss41Q920S2 322 aa13.82□□□□□ -0.2
Col17a1-201ENSMUST00000026045 OtorQ9JIE3 128 aa13.82□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Samd13D3YUG0 102 aa13.82□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ear14F6YUX7 155 aa13.82□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Pi4kaE9Q3L2 2105 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Pglyrp4Q0VB07 374 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Rnf182Q8C432 247 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Gm27027S4R1M6 97 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 CckP09240 115 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Supt4h1bQ9Z199 117 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 RhogP84096 191 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Cdkn2aQ64364 169 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 GlmpQ9JHJ3 404 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ccpg1osV9GXK1 122 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ighv7-2A0A0A6YX91 119 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Srp14P16254 110 aaKnown RBP13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Xcl1P47993 114 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Iba57Q8CAK1 358 aaKnown RBP13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Ube2wQ8VDW4 151 aa13.81□□□□□ -0.2
Col17a1-201ENSMUST00000026045 Znrf1Q91V17 227 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 74.9 ms