RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 APCP25054 2843 aa9.86□□□□□ -0.83
PHGDH-233ENST00000642021 SETXQ7Z333 2677 aaKnown RBP9.86□□□□□ -0.83
PHGDH-233ENST00000642021 OR13C6PQ8NH95 151 aa9.86□□□□□ -0.83
PHGDH-233ENST00000642021 SNCGO76070 127 aa9.86□□□□□ -0.83
PHGDH-233ENST00000642021 BBC3Q96PG8 261 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-233ENST00000642021 H3BT86 120 aa9.85□□□□□ -0.83
PHGDH-233ENST00000642021 CIRBPQ14011 172 aaKnown RBP9.85□□□□□ -0.83
PHGDH-233ENST00000642021 CCDC168Q8NDH2 2452 aa9.85□□□□□ -0.83
PHGDH-233ENST00000642021 DEFB113Q30KQ7 82 aa9.85□□□□□ -0.83
PHGDH-233ENST00000642021 KIR2DL5BQ8NHK3 375 aa9.85□□□□□ -0.83
PHGDH-233ENST00000642021 K7EQD1 137 aa9.84□□□□□ -0.83
PHGDH-233ENST00000642021 RPL36AP83881 106 aaKnown RBP9.84□□□□□ -0.83
PHGDH-233ENST00000642021 RPL36ALQ969Q0 106 aaKnown RBP9.84□□□□□ -0.83
PHGDH-233ENST00000642021 CDC42SE2Q9NRR3 84 aa9.84□□□□□ -0.83
PHGDH-233ENST00000642021 J3KT08 172 aa9.84□□□□□ -0.83
PHGDH-233ENST00000642021 ITPR3Q14573 2671 aa9.84□□□□□ -0.84
PHGDH-233ENST00000642021 FAM19A3Q7Z5A8 133 aa9.83□□□□□ -0.84
PHGDH-233ENST00000642021 C15orf53Q8NAA6 179 aa9.83□□□□□ -0.84
PHGDH-233ENST00000642021 NOP10Q9NPE3 64 aaKnown RBP9.83□□□□□ -0.84
PHGDH-233ENST00000642021 PRIMA1Q86XR5 153 aa9.82□□□□□ -0.84
PHGDH-233ENST00000642021 LRRC75A-AS1Q8N1F1 130 aa9.82□□□□□ -0.84
PHGDH-233ENST00000642021 MRAPQ8TCY5 172 aa9.82□□□□□ -0.84
PHGDH-233ENST00000642021 GIG44P09565 113 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-233ENST00000642021 KRTAP1-3Q8IUG1 177 aa9.82□□□□□ -0.84
PHGDH-233ENST00000642021 TRBV10-1A0A0K0K1A3 114 aa9.81□□□□□ -0.84
PHGDH-233ENST00000642021 LOC100131303A0A0U1RQF7 123 aa9.81□□□□□ -0.84
PHGDH-233ENST00000642021 PLA2G2AP14555 144 aa9.81□□□□□ -0.84
PHGDH-233ENST00000642021 DAZ2Q13117 558 aaKnown RBP9.81□□□□□ -0.84
PHGDH-233ENST00000642021 DAZ4Q86SG3 579 aaKnown RBP9.81□□□□□ -0.84
PHGDH-233ENST00000642021 WFDC10AQ9H1F0 79 aa9.81□□□□□ -0.84
PHGDH-233ENST00000642021 DAZ3Q9NR90 486 aaKnown RBP9.81□□□□□ -0.84
PHGDH-233ENST00000642021 CCL24O00175 119 aa9.81□□□□□ -0.84
PHGDH-233ENST00000642021 SEC61GP60059 68 aa9.8□□□□□ -0.84
PHGDH-233ENST00000642021 DEFB121Q5J5C9 76 aa9.8□□□□□ -0.84
PHGDH-233ENST00000642021 ESM1Q9NQ30 184 aa9.8□□□□□ -0.84
PHGDH-233ENST00000642021 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
PHGDH-233ENST00000642021 DNAJC9-AS1A6NH13 148 aa9.79□□□□□ -0.84
PHGDH-233ENST00000642021 COX7A2LO14548 114 aa9.79□□□□□ -0.84
PHGDH-233ENST00000642021 Q6Q795 121 aa9.78□□□□□ -0.84
PHGDH-233ENST00000642021 FLNAP21333 2647 aaKnown RBP9.78□□□□□ -0.84
PHGDH-233ENST00000642021 FAM218AQ96MZ4 157 aa9.76□□□□□ -0.85
PHGDH-233ENST00000642021 TMEM243Q9BU79 118 aa9.76□□□□□ -0.85
PHGDH-233ENST00000642021 RPL35AP18077 110 aaKnown RBP9.76□□□□□ -0.85
PHGDH-233ENST00000642021 WFDC11Q8NEX6 87 aa9.76□□□□□ -0.85
PHGDH-233ENST00000642021 CHCHD5Q9BSY4 110 aa9.76□□□□□ -0.85
PHGDH-233ENST00000642021 TRGV2A0A075B6R0 118 aa9.75□□□□□ -0.85
PHGDH-233ENST00000642021 IGKV3OR2-268A0A0C4DH90 116 aa9.75□□□□□ -0.85
PHGDH-233ENST00000642021 UBE2L6O14933 153 aa9.75□□□□□ -0.85
PHGDH-233ENST00000642021 TMEM86BQ8N661 226 aa9.75□□□□□ -0.85
PHGDH-233ENST00000642021 ACANP16112 2415 aa9.75□□□□□ -0.85
PHGDH-233ENST00000642021 ZNF843Q8N446 348 aa9.75□□□□□ -0.85
PHGDH-233ENST00000642021 C22orf24Q9Y442 160 aa9.75□□□□□ -0.85
PHGDH-233ENST00000642021 MTORP42345 2549 aa9.74□□□□□ -0.85
PHGDH-233ENST00000642021 IGLV4-60A0A075B6I1 120 aa9.74□□□□□ -0.85
PHGDH-233ENST00000642021 FAM240AA0A1B0GVK7 77 aa9.74□□□□□ -0.85
PHGDH-233ENST00000642021 A0A1B0GX51 115 aa9.74□□□□□ -0.85
PHGDH-233ENST00000642021 HRCT1Q6UXD1 115 aa9.73□□□□□ -0.85
PHGDH-233ENST00000642021 C19orf73Q9NVV2 129 aa9.73□□□□□ -0.85
PHGDH-233ENST00000642021 TOMM7Q9P0U1 55 aa9.73□□□□□ -0.85
PHGDH-233ENST00000642021 KLK5Q9Y337 293 aaPredicted RBP9.73□□□□□ -0.85
PHGDH-233ENST00000642021 C9orf153Q5TBE3 101 aa9.73□□□□□ -0.85
PHGDH-233ENST00000642021 MIR7-3HGQ8N6C7 128 aa9.73□□□□□ -0.85
PHGDH-233ENST00000642021 C4orf26Q17RF5 130 aa9.72□□□□□ -0.85
PHGDH-233ENST00000642021 CSNK1G2-AS1Q8NCQ2 148 aa9.72□□□□□ -0.85
PHGDH-233ENST00000642021 COPS9Q8WXC6 57 aa9.72□□□□□ -0.85
PHGDH-233ENST00000642021 LINC00337Q8N6G1 96 aa9.72□□□□□ -0.85
PHGDH-233ENST00000642021 IGKV2-28A0A075B6P5 120 aa9.71□□□□□ -0.85
PHGDH-233ENST00000642021 TRBV6-4A0A1B0GX49 114 aa9.71□□□□□ -0.85
PHGDH-233ENST00000642021 IGKV2D-28P01615 120 aa9.71□□□□□ -0.85
PHGDH-233ENST00000642021 BAALC-AS2P0C853 105 aa9.71□□□□□ -0.85
PHGDH-233ENST00000642021 COX7B2Q8TF08 81 aa9.71□□□□□ -0.85
PHGDH-233ENST00000642021 C16orf74Q96GX8 76 aa9.71□□□□□ -0.85
PHGDH-233ENST00000642021 LINC01006Q8NI28 216 aa9.71□□□□□ -0.86
PHGDH-233ENST00000642021 Q9HAA7 133 aa9.71□□□□□ -0.86
PHGDH-233ENST00000642021 TRGV4A0A0C4DH28 118 aa9.7□□□□□ -0.86
PHGDH-233ENST00000642021 HIST2H2BCQ6DN03 193 aa9.7□□□□□ -0.86
PHGDH-233ENST00000642021 FN1P02751 2386 aaKnown RBP9.7□□□□□ -0.86
PHGDH-233ENST00000642021 TRACP01848 142 aa9.7□□□□□ -0.86
PHGDH-233ENST00000642021 SMCR5Q8TEV8 140 aa9.7□□□□□ -0.86
PHGDH-233ENST00000642021 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
PHGDH-233ENST00000642021 FHL2Q14192 279 aa9.69□□□□□ -0.86
PHGDH-233ENST00000642021 OVOL2Q9BRP0 275 aa9.69□□□□□ -0.86
PHGDH-233ENST00000642021 IGHV3OR16-9A0A0B4J2B5 98 aa9.69□□□□□ -0.86
PHGDH-233ENST00000642021 TRBV6-8A0A0A6YYG3 113 aa9.69□□□□□ -0.86
PHGDH-233ENST00000642021 RPS28P62857 69 aaKnown RBP9.69□□□□□ -0.86
PHGDH-233ENST00000642021 SND1-IT1Q9HBX3 110 aa9.69□□□□□ -0.86
PHGDH-233ENST00000642021 ANK3Q12955 4377 aaKnown RBP9.68□□□□□ -0.86
PHGDH-233ENST00000642021 IGLV1-51P01701 117 aa9.68□□□□□ -0.86
PHGDH-233ENST00000642021 NBEAL2Q6ZNJ1 2754 aa9.68□□□□□ -0.86
PHGDH-233ENST00000642021 RPL28P46779 137 aaKnown RBP9.68□□□□□ -0.86
PHGDH-233ENST00000642021 LINC00158P58513 81 aa9.68□□□□□ -0.86
PHGDH-233ENST00000642021 C5orf38Q86SI9 138 aa9.68□□□□□ -0.86
PHGDH-233ENST00000642021 TRAV13-2A0A0B4J235 113 aa9.67□□□□□ -0.86
PHGDH-233ENST00000642021 TRBV7-7A0A0K0K1E9 115 aa9.67□□□□□ -0.86
PHGDH-233ENST00000642021 CCL18P55774 89 aa9.67□□□□□ -0.86
PHGDH-233ENST00000642021 FAM236AA0A1B0GUQ0 79 aa9.66□□□□□ -0.86
PHGDH-233ENST00000642021 FAM236BA0A1B0GV22 79 aa9.66□□□□□ -0.86
PHGDH-233ENST00000642021 CRPP02741 224 aa9.66□□□□□ -0.86
PHGDH-233ENST00000642021 SMIM11BQ8TCY0 68 aa9.66□□□□□ -0.86
PHGDH-233ENST00000642021 PFN2P35080 140 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms