RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 H7C423 109 aa11.9□□□□□ -0.5
PHGDH-223ENST00000641597 HERVK_113P63121 156 aa11.9□□□□□ -0.5
PHGDH-223ENST00000641597 GAGE6Q13070 117 aa11.89□□□□□ -0.51
PHGDH-223ENST00000641597 PRIMA1Q86XR5 153 aa11.89□□□□□ -0.51
PHGDH-223ENST00000641597 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
PHGDH-223ENST00000641597 DAZ4Q86SG3 579 aaKnown RBP11.88□□□□□ -0.51
PHGDH-223ENST00000641597 CSNK1G2-AS1Q8NCQ2 148 aa11.88□□□□□ -0.51
PHGDH-223ENST00000641597 DAZ3Q9NR90 486 aaKnown RBP11.88□□□□□ -0.51
PHGDH-223ENST00000641597 IGLV1-51P01701 117 aa11.88□□□□□ -0.51
PHGDH-223ENST00000641597 IGLV4-60A0A075B6I1 120 aa11.87□□□□□ -0.51
PHGDH-223ENST00000641597 TRBV10-1A0A0K0K1A3 114 aa11.87□□□□□ -0.51
PHGDH-223ENST00000641597 MEIG1Q5JSS6 88 aa11.87□□□□□ -0.51
PHGDH-223ENST00000641597 SPATA3Q8NHX4 192 aa11.87□□□□□ -0.51
PHGDH-223ENST00000641597 SCGB1A1P11684 91 aa11.86□□□□□ -0.51
PHGDH-223ENST00000641597 C2orf82Q6UX34 121 aa11.86□□□□□ -0.51
PHGDH-223ENST00000641597 TRGV4A0A0C4DH28 118 aa11.86□□□□□ -0.51
PHGDH-223ENST00000641597 TRBV10-2A0A0K0K1G8 114 aa11.86□□□□□ -0.51
PHGDH-223ENST00000641597 UBE2L6O14933 153 aa11.86□□□□□ -0.51
PHGDH-223ENST00000641597 DEFB130BP0DP73 79 aa11.86□□□□□ -0.51
PHGDH-223ENST00000641597 DEFB130AP0DP74 79 aa11.86□□□□□ -0.51
PHGDH-223ENST00000641597 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
PHGDH-223ENST00000641597 CRLF1O75462 422 aa11.85□□□□□ -0.51
PHGDH-223ENST00000641597 TOMM7Q9P0U1 55 aa11.85□□□□□ -0.51
PHGDH-223ENST00000641597 KRTAP10-3P60369 221 aa11.85□□□□□ -0.51
PHGDH-223ENST00000641597 RNASE1P07998 156 aaKnown RBP11.84□□□□□ -0.51
PHGDH-223ENST00000641597 TIMM17BO60830 172 aa11.84□□□□□ -0.51
PHGDH-223ENST00000641597 CKS1BP61024 79 aa11.84□□□□□ -0.51
PHGDH-223ENST00000641597 CIRBPQ14011 172 aaKnown RBP11.84□□□□□ -0.51
PHGDH-223ENST00000641597 C16orf74Q96GX8 76 aa11.84□□□□□ -0.51
PHGDH-223ENST00000641597 CSDC2Q9Y534 153 aaKnown RBP11.84□□□□□ -0.51
PHGDH-223ENST00000641597 KMT2BQ9UMN6 2715 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-223ENST00000641597 TRRAPQ9Y4A5 3859 aa11.84□□□□□ -0.51
PHGDH-223ENST00000641597 ATRQ13535 2644 aa11.83□□□□□ -0.52
PHGDH-223ENST00000641597 CIDEAO60543 219 aa11.82□□□□□ -0.52
PHGDH-223ENST00000641597 FHL2Q14192 279 aa11.82□□□□□ -0.52
PHGDH-223ENST00000641597 A0A096LPF7 62 aa11.82□□□□□ -0.52
PHGDH-223ENST00000641597 LST1O00453 97 aa11.82□□□□□ -0.52
PHGDH-223ENST00000641597 COX6CP09669 75 aa11.82□□□□□ -0.52
PHGDH-223ENST00000641597 IFITM1P13164 125 aa11.82□□□□□ -0.52
PHGDH-223ENST00000641597 CFAP161Q6P656 301 aa11.82□□□□□ -0.52
PHGDH-223ENST00000641597 CHCHD5Q9BSY4 110 aa11.81□□□□□ -0.52
PHGDH-223ENST00000641597 UBE2WQ96B02 151 aa11.8□□□□□ -0.52
PHGDH-223ENST00000641597 FAM19A3Q7Z5A8 133 aa11.8□□□□□ -0.52
PHGDH-223ENST00000641597 C11orf68Q9H3H3 251 aaKnown RBP11.8□□□□□ -0.52
PHGDH-223ENST00000641597 C5orf38Q86SI9 138 aa11.79□□□□□ -0.52
PHGDH-223ENST00000641597 C16orf95Q9H693 158 aa11.79□□□□□ -0.52
PHGDH-223ENST00000641597 TRBV6-4A0A1B0GX49 114 aa11.79□□□□□ -0.52
PHGDH-223ENST00000641597 CLPSL2Q6UWE3 100 aa11.79□□□□□ -0.52
PHGDH-223ENST00000641597 DEFB4AO15263 64 aa11.78□□□□□ -0.52
PHGDH-223ENST00000641597 M0QXV9 152 aa11.78□□□□□ -0.52
PHGDH-223ENST00000641597 FAM218AQ96MZ4 157 aa11.78□□□□□ -0.52
PHGDH-223ENST00000641597 OVOL2Q9BRP0 275 aa11.78□□□□□ -0.52
PHGDH-223ENST00000641597 NSD1Q96L73 2696 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-223ENST00000641597 TRBV6-8A0A0A6YYG3 113 aa11.77□□□□□ -0.52
PHGDH-223ENST00000641597 J3QKU1 62 aa11.77□□□□□ -0.52
PHGDH-223ENST00000641597 LINC00482Q8N8I6 264 aa11.77□□□□□ -0.52
PHGDH-223ENST00000641597 RNF183Q96D59 192 aa11.77□□□□□ -0.52
PHGDH-223ENST00000641597 MIR7-3HGQ8N6C7 128 aa11.77□□□□□ -0.53
PHGDH-223ENST00000641597 A0A1B0GV72 72 aa11.76□□□□□ -0.53
PHGDH-223ENST00000641597 TRAV8-4A0A0B4J246 113 aa11.75□□□□□ -0.53
PHGDH-223ENST00000641597 HILS1P60008 231 aa11.75□□□□□ -0.53
PHGDH-223ENST00000641597 TEX29Q8N6K0 151 aa11.75□□□□□ -0.53
PHGDH-223ENST00000641597 COX7B2Q8TF08 81 aa11.75□□□□□ -0.53
PHGDH-223ENST00000641597 PFN2P35080 140 aa11.75□□□□□ -0.53
PHGDH-223ENST00000641597 TTC32Q5I0X7 151 aa11.74□□□□□ -0.53
PHGDH-223ENST00000641597 SHISA2Q6UWI4 295 aa11.74□□□□□ -0.53
PHGDH-223ENST00000641597 Q8N3U1 123 aa11.74□□□□□ -0.53
PHGDH-223ENST00000641597 CITED1Q99966 193 aa11.74□□□□□ -0.53
PHGDH-223ENST00000641597 IGHV3OR16-9A0A0B4J2B5 98 aa11.74□□□□□ -0.53
PHGDH-223ENST00000641597 TMEM262E9PQX1 116 aa11.74□□□□□ -0.53
PHGDH-223ENST00000641597 LINC00337Q8N6G1 96 aa11.74□□□□□ -0.53
PHGDH-223ENST00000641597 IGKV2-28A0A075B6P5 120 aa11.73□□□□□ -0.53
PHGDH-223ENST00000641597 COX7A2LO14548 114 aa11.73□□□□□ -0.53
PHGDH-223ENST00000641597 IGKV2D-28P01615 120 aa11.73□□□□□ -0.53
PHGDH-223ENST00000641597 GYPEP15421 78 aa11.73□□□□□ -0.53
PHGDH-223ENST00000641597 Q9HAA7 133 aa11.73□□□□□ -0.53
PHGDH-223ENST00000641597 HIVEP1P15822 2718 aa11.73□□□□□ -0.53
PHGDH-223ENST00000641597 H3BT86 120 aa11.73□□□□□ -0.53
PHGDH-223ENST00000641597 PF4P02776 101 aa11.73□□□□□ -0.53
PHGDH-223ENST00000641597 XCL1P47992 114 aa11.73□□□□□ -0.53
PHGDH-223ENST00000641597 TRAV26-1A0A087WT03 109 aa11.72□□□□□ -0.53
PHGDH-223ENST00000641597 LINC00158P58513 81 aa11.72□□□□□ -0.53
PHGDH-223ENST00000641597 C15orf53Q8NAA6 179 aa11.72□□□□□ -0.53
PHGDH-223ENST00000641597 LINC01600Q96MT4 127 aa11.72□□□□□ -0.53
PHGDH-223ENST00000641597 TEP1Q99973 2627 aaKnown RBP11.71□□□□□ -0.54
PHGDH-223ENST00000641597 FAM110AQ9BQ89 295 aa11.71□□□□□ -0.54
PHGDH-223ENST00000641597 CMC4P56277 68 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-223ENST00000641597 SND1-IT1Q9HBX3 110 aa11.7□□□□□ -0.54
PHGDH-223ENST00000641597 X6R8D5 127 aa11.7□□□□□ -0.54
PHGDH-223ENST00000641597 SNCGO76070 127 aa11.7□□□□□ -0.54
PHGDH-223ENST00000641597 HERV-K104P63124 156 aa11.7□□□□□ -0.54
PHGDH-223ENST00000641597 LINC00959A0A1B0GUT2 108 aa11.69□□□□□ -0.54
PHGDH-223ENST00000641597 CCL18P55774 89 aa11.69□□□□□ -0.54
PHGDH-223ENST00000641597 C22orf24Q9Y442 160 aa11.69□□□□□ -0.54
PHGDH-223ENST00000641597 PKD1L1Q8TDX9 2849 aa11.68□□□□□ -0.54
PHGDH-223ENST00000641597 DEFB135Q30KP9 77 aa11.67□□□□□ -0.54
PHGDH-223ENST00000641597 NHLRC4P0CG21 123 aaPredicted RBP11.67□□□□□ -0.54
PHGDH-223ENST00000641597 FAM222AQ5U5X8 452 aa11.67□□□□□ -0.54
PHGDH-223ENST00000641597 A0A087WZ39 114 aa11.66□□□□□ -0.54
PHGDH-223ENST00000641597 GAGE2BQ13066 116 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms