RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 SPATA25Q9BR10 227 aa8.46□□□□□ -1.06
CACNA1D-228ENST00000638120 SMIM1B2RUZ4 78 aa8.45□□□□□ -1.06
CACNA1D-228ENST00000638120 PTTG1IPP53801 180 aa8.45□□□□□ -1.06
CACNA1D-228ENST00000638120 TM2D3Q9BRN9 247 aa8.45□□□□□ -1.06
CACNA1D-228ENST00000638120 NDUFA12Q9UI09 145 aa8.45□□□□□ -1.06
CACNA1D-228ENST00000638120 LELP1Q5T871 98 aa8.45□□□□□ -1.06
CACNA1D-228ENST00000638120 NBEAL1Q6ZS30 2694 aa8.44□□□□□ -1.06
CACNA1D-228ENST00000638120 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
CACNA1D-228ENST00000638120 A0A0J9YXY3 114 aa8.44□□□□□ -1.06
CACNA1D-228ENST00000638120 SRSF9Q13242 221 aaKnown RBP eCLIP8.44□□□□□ -1.06
CACNA1D-228ENST00000638120 TENM3Q9P273 2699 aa8.43□□□□□ -1.06
CACNA1D-228ENST00000638120 LINC00959A0A1B0GUT2 108 aa8.43□□□□□ -1.06
CACNA1D-228ENST00000638120 NHP2Q9NX24 153 aaKnown RBP8.43□□□□□ -1.06
CACNA1D-228ENST00000638120 SMIM13P0DJ93 91 aa8.43□□□□□ -1.06
CACNA1D-228ENST00000638120 C11orf45Q8TAV5 145 aa8.43□□□□□ -1.06
CACNA1D-228ENST00000638120 IGHV3OR16-9A0A0B4J2B5 98 aa8.42□□□□□ -1.06
CACNA1D-228ENST00000638120 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
CACNA1D-228ENST00000638120 NDUFA1O15239 70 aa8.42□□□□□ -1.06
CACNA1D-228ENST00000638120 IGHV3-30P01768 117 aa8.42□□□□□ -1.06
CACNA1D-228ENST00000638120 IGHV3-30-5P0DP03 117 aa8.42□□□□□ -1.06
CACNA1D-228ENST00000638120 NANOS2P60321 138 aaKnown RBP8.42□□□□□ -1.06
CACNA1D-228ENST00000638120 DEFB121Q5J5C9 76 aa8.42□□□□□ -1.06
CACNA1D-228ENST00000638120 TMEM238LA0A1B0GVL6 79 aa8.41□□□□□ -1.06
CACNA1D-228ENST00000638120 A0A1B0GWB2 263 aa8.41□□□□□ -1.06
CACNA1D-228ENST00000638120 A6NJY4 79 aa8.41□□□□□ -1.06
CACNA1D-228ENST00000638120 C9orf118A6NHY6 69 aa8.4□□□□□ -1.06
CACNA1D-228ENST00000638120 K7ERJ3 54 aa8.4□□□□□ -1.06
CACNA1D-228ENST00000638120 SS18Q15532 418 aa8.4□□□□□ -1.06
CACNA1D-228ENST00000638120 LYPD5Q6UWN5 251 aa8.4□□□□□ -1.06
CACNA1D-228ENST00000638120 MRAPQ8TCY5 172 aa8.4□□□□□ -1.06
CACNA1D-228ENST00000638120 RAB37Q96AX2 223 aa8.4□□□□□ -1.06
CACNA1D-228ENST00000638120 LITAFQ99732 161 aa8.4□□□□□ -1.06
CACNA1D-228ENST00000638120 MGAM2Q2M2H8 2515 aa8.4□□□□□ -1.06
CACNA1D-228ENST00000638120 DEFB131BA0A096LNP1 70 aa8.4□□□□□ -1.07
CACNA1D-228ENST00000638120 CCL25O15444 150 aa8.4□□□□□ -1.07
CACNA1D-228ENST00000638120 CLPSL2Q6UWE3 100 aa8.4□□□□□ -1.07
CACNA1D-228ENST00000638120 Q8N3U1 123 aa8.4□□□□□ -1.07
CACNA1D-228ENST00000638120 A0A087WZ39 114 aa8.39□□□□□ -1.07
CACNA1D-228ENST00000638120 ANGP03950 147 aaKnown RBP8.39□□□□□ -1.07
CACNA1D-228ENST00000638120 LINC00269Q8N2A0 174 aa8.39□□□□□ -1.07
CACNA1D-228ENST00000638120 Q9H8V8 135 aa8.39□□□□□ -1.07
CACNA1D-228ENST00000638120 TIMM17BO60830 172 aa8.38□□□□□ -1.07
CACNA1D-228ENST00000638120 ZNF625Q96I27 306 aaPredicted RBP8.38□□□□□ -1.07
CACNA1D-228ENST00000638120 SPANXDQ9BXN6 97 aa8.38□□□□□ -1.07
CACNA1D-228ENST00000638120 SPANXCQ9NY87 97 aa8.38□□□□□ -1.07
CACNA1D-228ENST00000638120 H3BUT2 72 aa8.38□□□□□ -1.07
CACNA1D-228ENST00000638120 REG3AQ06141 175 aa8.38□□□□□ -1.07
CACNA1D-228ENST00000638120 XCL1P47992 114 aa8.37□□□□□ -1.07
CACNA1D-228ENST00000638120 VAMP3Q15836 100 aa8.37□□□□□ -1.07
CACNA1D-228ENST00000638120 HERV-K104P63124 156 aa8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 MIAQ16674 131 aa8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 C5orf38Q86SI9 138 aa8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 COX7B2Q8TF08 81 aa8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 NAA38Q9BRA0 125 aaKnown RBP8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 HUWE1Q7Z6Z7 4374 aaKnown RBP8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 TRAV10A0A0B4J240 114 aa8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
CACNA1D-228ENST00000638120 CD164L2Q6UWJ8 174 aa8.35□□□□□ -1.07
CACNA1D-228ENST00000638120 CHCHD10Q8WYQ3 142 aaPredicted RBP8.35□□□□□ -1.07
CACNA1D-228ENST00000638120 PRR34Q9NV39 138 aa8.35□□□□□ -1.07
CACNA1D-228ENST00000638120 A0A1W2PPM0 123 aa8.34□□□□□ -1.07
CACNA1D-228ENST00000638120 A4D1N5 150 aa8.34□□□□□ -1.07
CACNA1D-228ENST00000638120 IGLL5B9A064 214 aa8.34□□□□□ -1.07
CACNA1D-228ENST00000638120 UBE2V1Q13404 147 aa8.34□□□□□ -1.07
CACNA1D-228ENST00000638120 CIRBPQ14011 172 aaKnown RBP8.34□□□□□ -1.07
CACNA1D-228ENST00000638120 TOMM7Q9P0U1 55 aa8.34□□□□□ -1.07
CACNA1D-228ENST00000638120 APOMO95445 188 aa8.33□□□□□ -1.08
CACNA1D-228ENST00000638120 CFC1BP0CG36 223 aa8.33□□□□□ -1.08
CACNA1D-228ENST00000638120 CFC1P0CG37 223 aa8.33□□□□□ -1.08
CACNA1D-228ENST00000638120 ESRGQ1W209 222 aa8.33□□□□□ -1.08
CACNA1D-228ENST00000638120 WFDC10BQ8IUB3 73 aa8.33□□□□□ -1.08
CACNA1D-228ENST00000638120 KLK12Q9UKR0 248 aa8.33□□□□□ -1.08
CACNA1D-228ENST00000638120 IGLV10-54A0A075B6I4 117 aa8.32□□□□□ -1.08
CACNA1D-228ENST00000638120 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
CACNA1D-228ENST00000638120 PRSS2P07478 247 aa8.32□□□□□ -1.08
CACNA1D-228ENST00000638120 IFITM1P13164 125 aa8.32□□□□□ -1.08
CACNA1D-228ENST00000638120 MEIG1Q5JSS6 88 aa8.32□□□□□ -1.08
CACNA1D-228ENST00000638120 C15orf53Q8NAA6 179 aa8.32□□□□□ -1.08
CACNA1D-228ENST00000638120 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 A0A0B4J2C4 111 aa8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 COX7A2LO14548 114 aa8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 FABP2P12104 132 aa8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 Q8IZM0 81 aa8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 FOXI1Q12951 378 aa8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 ENHOQ6UWT2 76 aa8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 DAND5Q8N907 189 aa8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 B9D2Q9BPU9 175 aa8.31□□□□□ -1.08
CACNA1D-228ENST00000638120 K7EP34 96 aa8.3□□□□□ -1.08
CACNA1D-228ENST00000638120 EIF4EBP3O60516 100 aaPredicted RBP8.3□□□□□ -1.08
CACNA1D-228ENST00000638120 GAGE10A6NGK3 116 aa8.29□□□□□ -1.08
CACNA1D-228ENST00000638120 TSPAN13O95857 204 aa8.29□□□□□ -1.08
CACNA1D-228ENST00000638120 CRPP02741 224 aa8.29□□□□□ -1.08
CACNA1D-228ENST00000638120 NPC2P61916 151 aa8.29□□□□□ -1.08
CACNA1D-228ENST00000638120 GTF2H5Q6ZYL4 71 aa8.29□□□□□ -1.08
CACNA1D-228ENST00000638120 PRO1854Q9UHT4 67 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms