RNA–Protein interactions for RNA: ENST00000637367.1

SCN2A-216, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 4,408 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-216ENST00000637367 MPLKIPQ8TAP9 179 aa4.77□□□□□ -1.65
SCN2A-216ENST00000637367 ODF3Q96PU9 254 aa4.77□□□□□ -1.65
SCN2A-216ENST00000637367 TIRAPP58753 221 aa4.77□□□□□ -1.65
SCN2A-216ENST00000637367 COX7BP24311 80 aa4.76□□□□□ -1.65
SCN2A-216ENST00000637367 PRUNE2Q8WUY3 3088 aa4.76□□□□□ -1.65
SCN2A-216ENST00000637367 TRBV6-8A0A0A6YYG3 113 aa4.76□□□□□ -1.65
SCN2A-216ENST00000637367 A0A1W2PPR1 153 aa4.76□□□□□ -1.65
SCN2A-216ENST00000637367 CXCL5P42830 114 aa4.76□□□□□ -1.65
SCN2A-216ENST00000637367 UBE2D1P51668 147 aa4.76□□□□□ -1.65
SCN2A-216ENST00000637367 RMI2Q96E14 147 aa4.76□□□□□ -1.65
SCN2A-216ENST00000637367 UBE2D4Q9Y2X8 147 aa4.76□□□□□ -1.65
SCN2A-216ENST00000637367 ADAMTS20P59510 1910 aa4.76□□□□□ -1.65
SCN2A-216ENST00000637367 SPTBN5Q9NRC6 3674 aaKnown RBP4.76□□□□□ -1.65
SCN2A-216ENST00000637367 BBC3Q96PG8 261 aaPredicted RBP4.76□□□□□ -1.65
SCN2A-216ENST00000637367 HIGD2AQ9BW72 106 aa4.76□□□□□ -1.65
SCN2A-216ENST00000637367 FREM2Q5SZK8 3169 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 IGLV4-69A0A075B6H9 119 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 USP17L23D6RBM5 183 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 C3orf22Q8N5N4 141 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 C9orf85Q96MD7 179 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 PYGO1Q9Y3Y4 419 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 BPY2O14599 106 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 Q6ZQY7 126 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 SMIM11BQ8TCY0 68 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 SNURFQ9Y675 71 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 A0A087WVE0 104 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 IBA57-AS1B1ANH7 110 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 ADAMTSL4-AS1Q5T5F5 129 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 Q6YL49 198 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 PRO3102Q9H379 93 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 RAI1Q7Z5J4 1906 aaPredicted RBP4.75□□□□□ -1.65
SCN2A-216ENST00000637367 XIRP2A4UGR9 3374 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 A0A0U1RQV1 116 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 C3orf84H3BNL1 204 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 CCL18P55774 89 aa4.75□□□□□ -1.65
SCN2A-216ENST00000637367 HECTD1Q9ULT8 2610 aa4.74□□□□□ -1.65
SCN2A-216ENST00000637367 IGHV4-31P0DP07 118 aa4.74□□□□□ -1.65
SCN2A-216ENST00000637367 MP68P56378 58 aa4.74□□□□□ -1.65
SCN2A-216ENST00000637367 PRR4Q16378 134 aa4.74□□□□□ -1.65
SCN2A-216ENST00000637367 LINC00242Q5T6M2 205 aa4.74□□□□□ -1.65
SCN2A-216ENST00000637367 C1orf158Q8N1D5 194 aa4.74□□□□□ -1.65
SCN2A-216ENST00000637367 WDFY4Q6ZS81 3184 aa4.74□□□□□ -1.65
SCN2A-216ENST00000637367 MRPS36P82909 103 aaKnown RBP4.73□□□□□ -1.65
SCN2A-216ENST00000637367 PKIGQ9Y2B9 76 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 IGLV2-18A0A075B6J9 118 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 LINC00694P0DN24 101 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 PRR3P79522 188 aaKnown RBP4.73□□□□□ -1.65
SCN2A-216ENST00000637367 MRGPRG-AS1Q2M3A8 158 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 TRIOO75962 3097 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 FAM236DA0A1B0GTK5 79 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 FAM236CP0DP71 79 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 IGKV2-28A0A075B6P5 120 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 IGKV2D-28P01615 120 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 CCKP06307 115 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 UBE2D3P61077 147 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 UBE2D2P62837 147 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 ZNF702PQ9H963 129 aa4.73□□□□□ -1.65
SCN2A-216ENST00000637367 CDH23Q9H251 3354 aa4.72□□□□□ -1.65
SCN2A-216ENST00000637367 IGLV1-40P01703 118 aa4.72□□□□□ -1.65
SCN2A-216ENST00000637367 H0Y9J4 135 aa4.72□□□□□ -1.65
SCN2A-216ENST00000637367 COX6A2Q02221 97 aa4.72□□□□□ -1.65
SCN2A-216ENST00000637367 C9orf116Q5BN46 136 aaPredicted RBP4.72□□□□□ -1.65
SCN2A-216ENST00000637367 PSMG3-AS1Q96PY0 264 aa4.72□□□□□ -1.65
SCN2A-216ENST00000637367 KLK5Q9Y337 293 aaPredicted RBP4.72□□□□□ -1.65
SCN2A-216ENST00000637367 TRBV6-4A0A1B0GX49 114 aa4.72□□□□□ -1.65
SCN2A-216ENST00000637367 LINC00959A0A1B0GUT2 108 aa4.71□□□□□ -1.65
SCN2A-216ENST00000637367 UBE2AP49459 152 aa4.71□□□□□ -1.65
SCN2A-216ENST00000637367 SERP2Q8N6R1 65 aa4.71□□□□□ -1.65
SCN2A-216ENST00000637367 ODF3L2Q3SX64 289 aa4.71□□□□□ -1.66
SCN2A-216ENST00000637367 CDC42SE2Q9NRR3 84 aa4.71□□□□□ -1.66
SCN2A-216ENST00000637367 SMIM1B2RUZ4 78 aa4.71□□□□□ -1.66
SCN2A-216ENST00000637367 TIMM17BO60830 172 aa4.71□□□□□ -1.66
SCN2A-216ENST00000637367 NDUFB1O75438 58 aa4.71□□□□□ -1.66
SCN2A-216ENST00000637367 COX7CP15954 63 aa4.71□□□□□ -1.66
SCN2A-216ENST00000637367 PDE6GP18545 87 aa4.71□□□□□ -1.66
SCN2A-216ENST00000637367 Q6ZSN1 163 aa4.71□□□□□ -1.66
SCN2A-216ENST00000637367 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
SCN2A-216ENST00000637367 CHD9Q3L8U1 2897 aa4.7□□□□□ -1.66
SCN2A-216ENST00000637367 IGLV4-60A0A075B6I1 120 aa4.7□□□□□ -1.66
SCN2A-216ENST00000637367 LINC01006Q8NI28 216 aa4.7□□□□□ -1.66
SCN2A-216ENST00000637367 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.69□□□□□ -1.66
SCN2A-216ENST00000637367 A0A0J9YWU9 116 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 PLA2G2AP14555 144 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 FAM19A5Q7Z5A7 132 aaPredicted RBP4.69□□□□□ -1.66
SCN2A-216ENST00000637367 UNQ6190/PRO20217Q6UXQ8 127 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 CHCHD7Q9BUK0 85 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 CDIP1Q9H305 208 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 MGAQ8IWI9 3026 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 A0A087WYN8 130 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 INAFM1C9JVW0 142 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 NDUFC2O95298 119 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 COX8CQ7Z4L0 72 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 WFDC10BQ8IUB3 73 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 IMUPQ9GZP8 106 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 VPS13AQ96RL7 3174 aa4.69□□□□□ -1.66
SCN2A-216ENST00000637367 TRANK1O15050 2925 aa4.68□□□□□ -1.66
SCN2A-216ENST00000637367 M0QXV9 152 aa4.68□□□□□ -1.66
SCN2A-216ENST00000637367 KRTAP10-9P60411 292 aa4.68□□□□□ -1.66
SCN2A-216ENST00000637367 CD164L2Q6UWJ8 174 aa4.68□□□□□ -1.66
SCN2A-216ENST00000637367 LRRC75A-AS1Q8N1F1 130 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms