RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 LINC00242Q5T6M2 205 aa8.81□□□□□ -1
PTPN11-205ENST00000635625 NTM-AS1Q6ZSK4 140 aa8.81□□□□□ -1
PTPN11-205ENST00000635625 KIR2DL5BQ8NHK3 375 aa8.81□□□□□ -1
PTPN11-205ENST00000635625 CDC42SE2Q9NRR3 84 aa8.81□□□□□ -1
PTPN11-205ENST00000635625 COL6A5A8TX70 2615 aa8.81□□□□□ -1
PTPN11-205ENST00000635625 TRGV4A0A0C4DH28 118 aa8.8□□□□□ -1
PTPN11-205ENST00000635625 TRBV30A0A0K0K1B3 111 aa8.8□□□□□ -1
PTPN11-205ENST00000635625 SMIM9A6NGZ8 99 aa8.8□□□□□ -1
PTPN11-205ENST00000635625 ETDBQ3ZM63 59 aa8.8□□□□□ -1
PTPN11-205ENST00000635625 GAGE7O76087 117 aa8.79□□□□□ -1
PTPN11-205ENST00000635625 TCL1BO95988 128 aa8.79□□□□□ -1
PTPN11-205ENST00000635625 GAGE12FP0CL80 117 aa8.79□□□□□ -1
PTPN11-205ENST00000635625 GAGE12GP0CL81 117 aa8.79□□□□□ -1
PTPN11-205ENST00000635625 GAGE12IP0CL82 117 aa8.79□□□□□ -1
PTPN11-205ENST00000635625 LINC00694P0DN24 101 aa8.79□□□□□ -1
PTPN11-205ENST00000635625 HERV-K104P63124 156 aa8.79□□□□□ -1
PTPN11-205ENST00000635625 LINC00612Q8N6U2 182 aa8.79□□□□□ -1
PTPN11-205ENST00000635625 WFDC10AQ9H1F0 79 aa8.78□□□□□ -1
PTPN11-205ENST00000635625 WNK1Q9H4A3 2382 aa8.78□□□□□ -1
PTPN11-205ENST00000635625 INAFM1C9JVW0 142 aa8.78□□□□□ -1
PTPN11-205ENST00000635625 PRSS2P07478 247 aa8.78□□□□□ -1
PTPN11-205ENST00000635625 ATXN8Q156A1 80 aa8.78□□□□□ -1
PTPN11-205ENST00000635625 Q1RN00 199 aa8.78□□□□□ -1
PTPN11-205ENST00000635625 Q8N3U1 123 aa8.78□□□□□ -1
PTPN11-205ENST00000635625 LINC01600Q96MT4 127 aa8.78□□□□□ -1
PTPN11-205ENST00000635625 SMIM1B2RUZ4 78 aa8.77□□□□□ -1.01
PTPN11-205ENST00000635625 C9orf66Q5T8R8 295 aa8.77□□□□□ -1.01
PTPN11-205ENST00000635625 TEN1Q86WV5 123 aa8.77□□□□□ -1.01
PTPN11-205ENST00000635625 COX6CP09669 75 aa8.76□□□□□ -1.01
PTPN11-205ENST00000635625 FHL2Q14192 279 aa8.76□□□□□ -1.01
PTPN11-205ENST00000635625 SH2D6Q7Z4S9 175 aa8.76□□□□□ -1.01
PTPN11-205ENST00000635625 PPDPFLQ8WWR9 84 aa8.76□□□□□ -1.01
PTPN11-205ENST00000635625 SPATA25Q9BR10 227 aa8.76□□□□□ -1.01
PTPN11-205ENST00000635625 COX6A2Q02221 97 aa8.76□□□□□ -1.01
PTPN11-205ENST00000635625 FOXI1Q12951 378 aa8.76□□□□□ -1.01
PTPN11-205ENST00000635625 ADAMTSL4-AS1Q5T5F5 129 aa8.76□□□□□ -1.01
PTPN11-205ENST00000635625 TRBV6-8A0A0A6YYG3 113 aa8.75□□□□□ -1.01
PTPN11-205ENST00000635625 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
PTPN11-205ENST00000635625 F5H768 121 aa8.75□□□□□ -1.01
PTPN11-205ENST00000635625 SFTA2Q6UW10 78 aa8.75□□□□□ -1.01
PTPN11-205ENST00000635625 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.75□□□□□ -1.01
PTPN11-205ENST00000635625 Q9H8V8 135 aa8.75□□□□□ -1.01
PTPN11-205ENST00000635625 SCGB1A1P11684 91 aa8.74□□□□□ -1.01
PTPN11-205ENST00000635625 KRTAP10-3P60369 221 aa8.74□□□□□ -1.01
PTPN11-205ENST00000635625 ZNF625Q96I27 306 aaPredicted RBP8.74□□□□□ -1.01
PTPN11-205ENST00000635625 ICOSQ9Y6W8 199 aa8.74□□□□□ -1.01
PTPN11-205ENST00000635625 STAB1Q9NY15 2570 aa8.74□□□□□ -1.01
PTPN11-205ENST00000635625 GAGE12HA6NDE8 117 aa8.73□□□□□ -1.01
PTPN11-205ENST00000635625 LYRM9A8MSI8 78 aa8.73□□□□□ -1.01
PTPN11-205ENST00000635625 A8MZ25 164 aa8.73□□□□□ -1.01
PTPN11-205ENST00000635625 SLC25A20O43772 301 aa8.73□□□□□ -1.01
PTPN11-205ENST00000635625 PRIMA1Q86XR5 153 aa8.73□□□□□ -1.01
PTPN11-205ENST00000635625 CRLF1O75462 422 aa8.72□□□□□ -1.01
PTPN11-205ENST00000635625 MTURNQ8N3F0 131 aa8.72□□□□□ -1.01
PTPN11-205ENST00000635625 LINC00308Q8TCZ7 52 aa8.72□□□□□ -1.01
PTPN11-205ENST00000635625 SIGMAR1Q99720 223 aa8.72□□□□□ -1.01
PTPN11-205ENST00000635625 H7C2G1 150 aa8.71□□□□□ -1.01
PTPN11-205ENST00000635625 TRIAP1O43715 76 aa8.71□□□□□ -1.01
PTPN11-205ENST00000635625 APOC4P55056 127 aa8.71□□□□□ -1.01
PTPN11-205ENST00000635625 LOC100131303A0A0U1RQF7 123 aa8.71□□□□□ -1.02
PTPN11-205ENST00000635625 LINC01620Q4KN68 170 aa8.71□□□□□ -1.02
PTPN11-205ENST00000635625 CHCHD5Q9BSY4 110 aa8.71□□□□□ -1.02
PTPN11-205ENST00000635625 C9JAW5 83 aa8.7□□□□□ -1.02
PTPN11-205ENST00000635625 RPL13AP40429 203 aaKnown RBP8.7□□□□□ -1.02
PTPN11-205ENST00000635625 MEIG1Q5JSS6 88 aa8.7□□□□□ -1.02
PTPN11-205ENST00000635625 PRO0255Q9UI72 69 aa8.7□□□□□ -1.02
PTPN11-205ENST00000635625 X6R8D5 127 aa8.7□□□□□ -1.02
PTPN11-205ENST00000635625 TRBV10-2A0A0K0K1G8 114 aa8.69□□□□□ -1.02
PTPN11-205ENST00000635625 A0A1B0GUV1 79 aa8.69□□□□□ -1.02
PTPN11-205ENST00000635625 H3BT86 120 aa8.69□□□□□ -1.02
PTPN11-205ENST00000635625 GAGE6Q13070 117 aa8.69□□□□□ -1.02
PTPN11-205ENST00000635625 LINC01561Q8N1V8 128 aa8.69□□□□□ -1.02
PTPN11-205ENST00000635625 ANKRD29Q8N6D5 301 aa8.69□□□□□ -1.02
PTPN11-205ENST00000635625 COX7B2Q8TF08 81 aa8.69□□□□□ -1.02
PTPN11-205ENST00000635625 LOC100996750A0A140TA64 210 aa8.68□□□□□ -1.02
PTPN11-205ENST00000635625 TMEM262E9PQX1 116 aa8.68□□□□□ -1.02
PTPN11-205ENST00000635625 C21orf62-AS1Q17RA5 79 aa8.68□□□□□ -1.02
PTPN11-205ENST00000635625 FAM222AQ5U5X8 452 aa8.68□□□□□ -1.02
PTPN11-205ENST00000635625 KRTAP4-6Q9BYQ5 205 aa8.68□□□□□ -1.02
PTPN11-205ENST00000635625 A0A087WZ39 114 aa8.68□□□□□ -1.02
PTPN11-205ENST00000635625 DEFB130BP0DP73 79 aa8.68□□□□□ -1.02
PTPN11-205ENST00000635625 DEFB130AP0DP74 79 aa8.68□□□□□ -1.02
PTPN11-205ENST00000635625 TENM1Q9UKZ4 2725 aa8.67□□□□□ -1.02
PTPN11-205ENST00000635625 LST1O00453 97 aa8.67□□□□□ -1.02
PTPN11-205ENST00000635625 GYPEP15421 78 aa8.67□□□□□ -1.02
PTPN11-205ENST00000635625 IGHV3OR16-9A0A0B4J2B5 98 aa8.66□□□□□ -1.02
PTPN11-205ENST00000635625 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
PTPN11-205ENST00000635625 NPC2P61916 151 aa8.66□□□□□ -1.02
PTPN11-205ENST00000635625 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
PTPN11-205ENST00000635625 CITED1Q99966 193 aa8.66□□□□□ -1.02
PTPN11-205ENST00000635625 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
PTPN11-205ENST00000635625 IBA57-AS1B1ANH7 110 aa8.65□□□□□ -1.02
PTPN11-205ENST00000635625 SS18Q15532 418 aa8.65□□□□□ -1.02
PTPN11-205ENST00000635625 DAND5Q8N907 189 aa8.65□□□□□ -1.02
PTPN11-205ENST00000635625 ANK2Q01484 3957 aa8.64□□□□□ -1.03
PTPN11-205ENST00000635625 TRAV13-2A0A0B4J235 113 aa8.64□□□□□ -1.03
PTPN11-205ENST00000635625 MIFP14174 115 aa8.64□□□□□ -1.03
PTPN11-205ENST00000635625 KRTAP21-3Q3LHN1 58 aa8.64□□□□□ -1.03
PTPN11-205ENST00000635625 LINC00959A0A1B0GUT2 108 aa8.63□□□□□ -1.03
PTPN11-205ENST00000635625 COX7A2LO14548 114 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms