RNA–Protein interactions for RNA: ENST00000631029.1

UBA3-213, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 5 BASIC

Gene UBA3, Length 123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-213	ENST00000631029	LINC00612	Q8N6U2	182 aa		4.27	□□□□□ -1.73
UBA3-213	ENST00000631029	CSNK1G2-AS1	Q8NCQ2	148 aa		4.27	□□□□□ -1.73
UBA3-213	ENST00000631029	OBSCN-AS1	Q96MR7	158 aa		4.27	□□□□□ -1.73
UBA3-213	ENST00000631029	FAM218A	Q96MZ4	157 aa		4.27	□□□□□ -1.73
UBA3-213	ENST00000631029	USP9X	Q93008	2570 aa	Predicted RBP	4.27	□□□□□ -1.73
UBA3-213	ENST00000631029	DNHD1	Q96M86	4753 aa		4.27	□□□□□ -1.73
UBA3-213	ENST00000631029	VPS13C	Q709C8	3753 aa		4.27	□□□□□ -1.73
UBA3-213	ENST00000631029	TRGV1	A0A0A0MS02	117 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	TRAV13-2	A0A0B4J235	113 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	CCDC179	H3BU77	68 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	NDUFA7	O95182	113 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	ATP5G1	P05496	136 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	CXCL5	P42830	114 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	KRTAP10-9	P60411	292 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	TTC32	Q5I0X7	151 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	C5orf38	Q86SI9	138 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	PRIMA1	Q86XR5	153 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	STH	Q8IWL8	128 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	LINC01561	Q8N1V8	128 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	SMCR5	Q8TEV8	140 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	C16orf74	Q96GX8	76 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	TMEM243	Q9BU79	118 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	XCL2	Q9UBD3	114 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	FBN2	P35556	2912 aa		4.26	□□□□□ -1.73
UBA3-213	ENST00000631029	IBA57-AS1	B1ANH7	110 aa		4.25	□□□□□ -1.73
UBA3-213	ENST00000631029	LY6G6D	O95868	133 aa		4.25	□□□□□ -1.73
UBA3-213	ENST00000631029	INAFM2	P0DMQ5	153 aa		4.25	□□□□□ -1.73
UBA3-213	ENST00000631029	HIST1H4A	P62805	103 aa	Known RBP	4.25	□□□□□ -1.73
UBA3-213	ENST00000631029	LINC00337	Q8N6G1	96 aa		4.25	□□□□□ -1.73
UBA3-213	ENST00000631029	MAPK1IP1L	Q8NDC0	245 aa		4.25	□□□□□ -1.73
UBA3-213	ENST00000631029	COX7B2	Q8TF08	81 aa		4.25	□□□□□ -1.73
UBA3-213	ENST00000631029	LINC00167	Q96N53	147 aa		4.25	□□□□□ -1.73
UBA3-213	ENST00000631029	C16orf95	Q9H693	158 aa		4.25	□□□□□ -1.73
UBA3-213	ENST00000631029	CSMD2	Q7Z408	3487 aa		4.25	□□□□□ -1.73
UBA3-213	ENST00000631029	NOTCH2	Q04721	2471 aa		4.24	□□□□□ -1.73
UBA3-213	ENST00000631029	MYO9A	B2RTY4	2548 aa		4.24	□□□□□ -1.73
UBA3-213	ENST00000631029		A0A087WZ39	114 aa		4.24	□□□□□ -1.73
UBA3-213	ENST00000631029	TRAV13-1	A0A0B4J241	112 aa		4.24	□□□□□ -1.73
UBA3-213	ENST00000631029		B5MCH6	92 aa		4.24	□□□□□ -1.73
UBA3-213	ENST00000631029	CCL24	O00175	119 aa		4.24	□□□□□ -1.73
UBA3-213	ENST00000631029	IGLV1-51	P01701	117 aa		4.24	□□□□□ -1.73
UBA3-213	ENST00000631029	BAALC-AS2	P0C853	105 aa		4.24	□□□□□ -1.73
UBA3-213	ENST00000631029	FHL2	Q14192	279 aa		4.24	□□□□□ -1.73
UBA3-213	ENST00000631029	MEIG1	Q5JSS6	88 aa		4.24	□□□□□ -1.73
UBA3-213	ENST00000631029	ANKRD17	O75179	2603 aa	Known RBP	4.24	□□□□□ -1.73
UBA3-213	ENST00000631029	TRBV6-8	A0A0A6YYG3	113 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	DNAJC9-AS1	A6NH13	148 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029		H0YGX0	51 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	CRP	P02741	224 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	MAL	P21145	153 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	CCL18	P55774	89 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	MIR7-3HG	Q8N6C7	128 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	KIR2DL5B	Q8NHK3	375 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	SS18L2	Q9UHA2	77 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	AKAP9	Q99996	3911 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	CELSR2	Q9HCU4	2923 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	LRRK2	Q5S007	2527 aa		4.23	□□□□□ -1.73
UBA3-213	ENST00000631029	PDZD2	O15018	2839 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	IGLV4-60	A0A075B6I1	120 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	LOC100131303	A0A0U1RQF7	123 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029		A0A1B0GUV1	79 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029		A0A1B0GX51	115 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029		A0A1W2PRX2	142 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	SMIM11B	Q8TCY0	68 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	TMEM126A	Q9H061	195 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	SND1-IT1	Q9HBX3	110 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	NOP10	Q9NPE3	64 aa	Known RBP	4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	ESM1	Q9NQ30	184 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	OTOG	Q6ZRI0	2925 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	CSPG4	Q6UVK1	2322 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	ITPR2	Q14571	2701 aa		4.22	□□□□□ -1.73
UBA3-213	ENST00000631029	UBE2L6	O14933	153 aa		4.21	□□□□□ -1.74
UBA3-213	ENST00000631029	RNASE1	P07998	156 aa	Known RBP	4.21	□□□□□ -1.74
UBA3-213	ENST00000631029	KRTAP1-1	Q07627	177 aa		4.21	□□□□□ -1.74
UBA3-213	ENST00000631029	SS18	Q15532	418 aa		4.21	□□□□□ -1.74
UBA3-213	ENST00000631029		Q6JHZ5	121 aa		4.21	□□□□□ -1.74
UBA3-213	ENST00000631029		Q8IZM0	81 aa		4.21	□□□□□ -1.74
UBA3-213	ENST00000631029	C11orf44	Q8N8P7	122 aa		4.21	□□□□□ -1.74
UBA3-213	ENST00000631029	KLK5	Q9Y337	293 aa	Predicted RBP	4.21	□□□□□ -1.74
UBA3-213	ENST00000631029	MXRA5	Q9NR99	2828 aa		4.21	□□□□□ -1.74
UBA3-213	ENST00000631029	CREBBP	Q92793	2442 aa		4.2	□□□□□ -1.74
UBA3-213	ENST00000631029		A0A087WYN8	130 aa		4.2	□□□□□ -1.74
UBA3-213	ENST00000631029		A0A0U1RRA0	63 aa		4.2	□□□□□ -1.74
UBA3-213	ENST00000631029	FAM236A	A0A1B0GUQ0	79 aa		4.2	□□□□□ -1.74
UBA3-213	ENST00000631029	LINC00959	A0A1B0GUT2	108 aa		4.2	□□□□□ -1.74
UBA3-213	ENST00000631029	FAM236B	A0A1B0GV22	79 aa		4.2	□□□□□ -1.74
UBA3-213	ENST00000631029	NDUFC2	O95298	119 aa		4.2	□□□□□ -1.74
UBA3-213	ENST00000631029	NANOS2	P60321	138 aa	Known RBP	4.2	□□□□□ -1.74
UBA3-213	ENST00000631029	KHDC1L	Q5JSQ8	128 aa		4.2	□□□□□ -1.74
UBA3-213	ENST00000631029	LINC00526	Q96FQ7	95 aa		4.2	□□□□□ -1.74
UBA3-213	ENST00000631029	C2orf48	Q96LS8	159 aa		4.2	□□□□□ -1.74
UBA3-213	ENST00000631029	IGHV4-28	A0A0C4DH34	117 aa		4.19	□□□□□ -1.74
UBA3-213	ENST00000631029	UQCRQ	O14949	82 aa		4.19	□□□□□ -1.74
UBA3-213	ENST00000631029	KIAA0087	Q14695	138 aa		4.19	□□□□□ -1.74
UBA3-213	ENST00000631029	C9orf129	Q5T035	196 aa	Known RBP	4.19	□□□□□ -1.74
UBA3-213	ENST00000631029	LYPD5	Q6UWN5	251 aa		4.19	□□□□□ -1.74
UBA3-213	ENST00000631029	C3orf22	Q8N5N4	141 aa		4.19	□□□□□ -1.74
UBA3-213	ENST00000631029	LINC01006	Q8NI28	216 aa		4.19	□□□□□ -1.74
UBA3-213	ENST00000631029	CHCHD5	Q9BSY4	110 aa		4.19	□□□□□ -1.74

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