RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 LBHQ53QV2 105 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC3-210ENST00000617904 FAM104AQ969W3 186 aa11.57□□□□□ -0.56
TRAPPC3-210ENST00000617904 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
TRAPPC3-210ENST00000617904 ZNF815PA8K554 130 aa11.56□□□□□ -0.56
TRAPPC3-210ENST00000617904 J3QQQ9 107 aa11.56□□□□□ -0.56
TRAPPC3-210ENST00000617904 CTAG1AP78358 180 aa11.56□□□□□ -0.56
TRAPPC3-210ENST00000617904 MPV17L2Q567V2 206 aa11.56□□□□□ -0.56
TRAPPC3-210ENST00000617904 LINC00242Q5T6M2 205 aa11.56□□□□□ -0.56
TRAPPC3-210ENST00000617904 SCGB1D4Q6XE38 83 aa11.56□□□□□ -0.56
TRAPPC3-210ENST00000617904 HIGD1BQ9P298 99 aa11.56□□□□□ -0.56
TRAPPC3-210ENST00000617904 PLECQ15149 4684 aaKnown RBP11.55□□□□□ -0.56
TRAPPC3-210ENST00000617904 IGLV4-60A0A075B6I1 120 aa11.55□□□□□ -0.56
TRAPPC3-210ENST00000617904 IGHV1-58A0A0C4DH39 117 aa11.55□□□□□ -0.56
TRAPPC3-210ENST00000617904 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
TRAPPC3-210ENST00000617904 CRPP02741 224 aa11.55□□□□□ -0.56
TRAPPC3-210ENST00000617904 CCL18P55774 89 aa11.55□□□□□ -0.56
TRAPPC3-210ENST00000617904 PCP2Q8IVA1 136 aa11.55□□□□□ -0.56
TRAPPC3-210ENST00000617904 ALMS1Q8TCU4 4167 aa11.54□□□□□ -0.56
TRAPPC3-210ENST00000617904 IGKV2D-26A0A0A0MRZ7 120 aa11.54□□□□□ -0.56
TRAPPC3-210ENST00000617904 LINC00959A0A1B0GUT2 108 aa11.53□□□□□ -0.56
TRAPPC3-210ENST00000617904 HSD52Q0P140 79 aa11.53□□□□□ -0.56
TRAPPC3-210ENST00000617904 CDKN2A-AS1Q9UH64 79 aa11.53□□□□□ -0.56
TRAPPC3-210ENST00000617904 TAL2Q16559 108 aa11.52□□□□□ -0.57
TRAPPC3-210ENST00000617904 IGLL5B9A064 214 aa11.51□□□□□ -0.57
TRAPPC3-210ENST00000617904 IGHV3-30-3P0DP02 117 aa11.51□□□□□ -0.57
TRAPPC3-210ENST00000617904 REG3AQ06141 175 aa11.51□□□□□ -0.57
TRAPPC3-210ENST00000617904 SFTA2Q6UW10 78 aa11.51□□□□□ -0.57
TRAPPC3-210ENST00000617904 LINC01561Q8N1V8 128 aa11.51□□□□□ -0.57
TRAPPC3-210ENST00000617904 LINC00269Q8N2A0 174 aa11.51□□□□□ -0.57
TRAPPC3-210ENST00000617904 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC3-210ENST00000617904 TRAV8-4A0A0B4J246 113 aa11.5□□□□□ -0.57
TRAPPC3-210ENST00000617904 SPINK8P0C7L1 97 aa11.5□□□□□ -0.57
TRAPPC3-210ENST00000617904 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
TRAPPC3-210ENST00000617904 NUPR2A6NF83 97 aa11.48□□□□□ -0.57
TRAPPC3-210ENST00000617904 GCSHP23434 173 aa11.48□□□□□ -0.57
TRAPPC3-210ENST00000617904 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
TRAPPC3-210ENST00000617904 BATFQ16520 125 aa11.48□□□□□ -0.57
TRAPPC3-210ENST00000617904 ESRGQ1W209 222 aa11.48□□□□□ -0.57
TRAPPC3-210ENST00000617904 TMEM238C9JI98 176 aa11.47□□□□□ -0.57
TRAPPC3-210ENST00000617904 APOMO95445 188 aa11.47□□□□□ -0.57
TRAPPC3-210ENST00000617904 COX6A2Q02221 97 aa11.47□□□□□ -0.57
TRAPPC3-210ENST00000617904 CD164L2Q6UWJ8 174 aa11.47□□□□□ -0.57
TRAPPC3-210ENST00000617904 C2orf91Q6ZV80 131 aa11.47□□□□□ -0.57
TRAPPC3-210ENST00000617904 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
TRAPPC3-210ENST00000617904 NDUFA12Q9UI09 145 aa11.47□□□□□ -0.57
TRAPPC3-210ENST00000617904 A0A087WZ39 114 aa11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 PRSS2P07478 247 aa11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 MALP21145 153 aa11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 HINT1P49773 126 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 HERV-K104P63124 156 aa11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 SRSF9Q13242 221 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 MIAQ16674 131 aa11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 LINC01556Q5JQF7 62 aa11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 COL5A1-AS1Q5SY13 56 aa11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 MAPKAPK5-AS1Q8N8E1 139 aa11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 KLK12Q9UKR0 248 aa11.46□□□□□ -0.57
TRAPPC3-210ENST00000617904 TRAV8-3A0A0A6YYJ7 113 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 IGLV5-39A0A0G2JS06 123 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 TMEM238LA0A1B0GVL6 79 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 A6NDN8 102 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 A6NJY4 79 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 SMIM1B2RUZ4 78 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 COX7A2LO14548 114 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 IGHV3-30P01768 117 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 IGHV3-33P01772 117 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 IGHV3-30-5P0DP03 117 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 XCL1P47992 114 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 CLPSL2Q6UWE3 100 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
TRAPPC3-210ENST00000617904 IGHV3OR16-9A0A0B4J2B5 98 aa11.44□□□□□ -0.58
TRAPPC3-210ENST00000617904 K7EP13 123 aa11.44□□□□□ -0.58
TRAPPC3-210ENST00000617904 PTTG1IPP53801 180 aa11.44□□□□□ -0.58
TRAPPC3-210ENST00000617904 C10orf126Q8N4M7 172 aa11.44□□□□□ -0.58
TRAPPC3-210ENST00000617904 CHCHD10Q8WYQ3 142 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC3-210ENST00000617904 TTTY13Q9BZ97 58 aa11.44□□□□□ -0.58
TRAPPC3-210ENST00000617904 PRR34Q9NV39 138 aa11.44□□□□□ -0.58
TRAPPC3-210ENST00000617904 Q6ZVH6 145 aa11.43□□□□□ -0.58
TRAPPC3-210ENST00000617904 WFDC10BQ8IUB3 73 aa11.43□□□□□ -0.58
TRAPPC3-210ENST00000617904 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
TRAPPC3-210ENST00000617904 ORAOV1Q8WV07 137 aa11.43□□□□□ -0.58
TRAPPC3-210ENST00000617904 LINC00476Q8WZB0 136 aa11.43□□□□□ -0.58
TRAPPC3-210ENST00000617904 UBE2WQ96B02 151 aa11.43□□□□□ -0.58
TRAPPC3-210ENST00000617904 SNHG12Q9BXW3 62 aa11.43□□□□□ -0.58
TRAPPC3-210ENST00000617904 NDUFA1O15239 70 aa11.42□□□□□ -0.58
TRAPPC3-210ENST00000617904 UBE2DNLQ8IWF7 75 aa11.42□□□□□ -0.58
TRAPPC3-210ENST00000617904 RMI2Q96E14 147 aa11.42□□□□□ -0.58
TRAPPC3-210ENST00000617904 SPANXB1Q9NS25 103 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC3-210ENST00000617904 DNAH10OSP0CZ25 163 aa11.41□□□□□ -0.58
TRAPPC3-210ENST00000617904 CFAP161Q6P656 301 aa11.41□□□□□ -0.58
TRAPPC3-210ENST00000617904 C5orf38Q86SI9 138 aa11.41□□□□□ -0.58
TRAPPC3-210ENST00000617904 TOMM7Q9P0U1 55 aa11.41□□□□□ -0.58
TRAPPC3-210ENST00000617904 TIMM17BO60830 172 aa11.4□□□□□ -0.58
TRAPPC3-210ENST00000617904 CXCL5P42830 114 aa11.4□□□□□ -0.58
TRAPPC3-210ENST00000617904 TSPEAR-AS2P59090 65 aa11.4□□□□□ -0.58
TRAPPC3-210ENST00000617904 C6orf226Q5I0X4 101 aa11.4□□□□□ -0.58
TRAPPC3-210ENST00000617904 BVES-AS1Q5T3Y7 98 aa11.4□□□□□ -0.58
TRAPPC3-210ENST00000617904 UPK3BQ9BT76 320 aa11.4□□□□□ -0.58
TRAPPC3-210ENST00000617904 CEND1Q8N111 149 aa11.39□□□□□ -0.59
TRAPPC3-210ENST00000617904 C1orf43Q9BWL3 253 aa11.39□□□□□ -0.59
TRAPPC3-210ENST00000617904 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms