RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PLA2G2AP14555 144 aa10□□□□□ -0.81
CACNA1C-231ENST00000616390 PPDPFLQ8WWR9 84 aa10□□□□□ -0.81
CACNA1C-231ENST00000616390 NOP10Q9NPE3 64 aaKnown RBP10□□□□□ -0.81
CACNA1C-231ENST00000616390 UNC79Q9P2D8 2635 aa10□□□□□ -0.81
CACNA1C-231ENST00000616390 PYGO1Q9Y3Y4 419 aa9.99□□□□□ -0.81
CACNA1C-231ENST00000616390 A0A0J9YXY3 114 aa9.99□□□□□ -0.81
CACNA1C-231ENST00000616390 KLK5Q9Y337 293 aaPredicted RBP9.99□□□□□ -0.81
CACNA1C-231ENST00000616390 MRPS36P82909 103 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-231ENST00000616390 Q1RN00 199 aa9.98□□□□□ -0.81
CACNA1C-231ENST00000616390 SMR3AQ99954 134 aa9.98□□□□□ -0.81
CACNA1C-231ENST00000616390 PRO1854Q9UHT4 67 aa9.98□□□□□ -0.81
CACNA1C-231ENST00000616390 TCL1BO95988 128 aa9.97□□□□□ -0.81
CACNA1C-231ENST00000616390 OXTP01178 125 aa9.97□□□□□ -0.81
CACNA1C-231ENST00000616390 BEAN1Q3B7T3 259 aa9.97□□□□□ -0.81
CACNA1C-231ENST00000616390 DAND5Q8N907 189 aa9.97□□□□□ -0.81
CACNA1C-231ENST00000616390 NDUFA12Q9UI09 145 aa9.97□□□□□ -0.81
CACNA1C-231ENST00000616390 EIF4EBP3O60516 100 aaPredicted RBP9.97□□□□□ -0.81
CACNA1C-231ENST00000616390 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
CACNA1C-231ENST00000616390 LINC01620Q4KN68 170 aa9.96□□□□□ -0.81
CACNA1C-231ENST00000616390 ADAMTSL4-AS1Q5T5F5 129 aa9.96□□□□□ -0.81
CACNA1C-231ENST00000616390 ZNF625Q96I27 306 aaPredicted RBP9.96□□□□□ -0.81
CACNA1C-231ENST00000616390 C3orf22Q8N5N4 141 aa9.96□□□□□ -0.82
CACNA1C-231ENST00000616390 TRAV13-1A0A0B4J241 112 aa9.95□□□□□ -0.82
CACNA1C-231ENST00000616390 IGHV1-58A0A0C4DH39 117 aa9.95□□□□□ -0.82
CACNA1C-231ENST00000616390 SMCPP49901 116 aaPredicted RBP9.95□□□□□ -0.82
CACNA1C-231ENST00000616390 COX6A2Q02221 97 aa9.95□□□□□ -0.82
CACNA1C-231ENST00000616390 KRTAP1-1Q07627 177 aa9.95□□□□□ -0.82
CACNA1C-231ENST00000616390 VWFP04275 2813 aa9.95□□□□□ -0.82
CACNA1C-231ENST00000616390 TRGV2A0A075B6R0 118 aa9.94□□□□□ -0.82
CACNA1C-231ENST00000616390 UBE2D3P61077 147 aa9.94□□□□□ -0.82
CACNA1C-231ENST00000616390 UBE2D2P62837 147 aa9.94□□□□□ -0.82
CACNA1C-231ENST00000616390 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.94□□□□□ -0.82
CACNA1C-231ENST00000616390 CHCHD5Q9BSY4 110 aa9.94□□□□□ -0.82
CACNA1C-231ENST00000616390 DPH3Q96FX2 82 aa9.94□□□□□ -0.82
CACNA1C-231ENST00000616390 VSIG2Q96IQ7 327 aa9.94□□□□□ -0.82
CACNA1C-231ENST00000616390 LOC100131303A0A0U1RQF7 123 aa9.93□□□□□ -0.82
CACNA1C-231ENST00000616390 RPL36AP83881 106 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-231ENST00000616390 PIK3CD-AS1Q5SR53 167 aa9.93□□□□□ -0.82
CACNA1C-231ENST00000616390 RPL36ALQ969Q0 106 aaKnown RBP9.93□□□□□ -0.82
CACNA1C-231ENST00000616390 C2orf48Q96LS8 159 aa9.93□□□□□ -0.82
CACNA1C-231ENST00000616390 IGKV3OR2-268A0A0C4DH90 116 aa9.92□□□□□ -0.82
CACNA1C-231ENST00000616390 K7EQD1 137 aa9.92□□□□□ -0.82
CACNA1C-231ENST00000616390 TMEM263Q8WUH6 116 aaKnown RBP9.92□□□□□ -0.82
CACNA1C-231ENST00000616390 LINC00526Q96FQ7 95 aa9.92□□□□□ -0.82
CACNA1C-231ENST00000616390 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
CACNA1C-231ENST00000616390 ANK3Q12955 4377 aaKnown RBP9.92□□□□□ -0.82
CACNA1C-231ENST00000616390 IGHV3-33P01772 117 aa9.92□□□□□ -0.82
CACNA1C-231ENST00000616390 GIG44P09565 113 aaPredicted RBP9.92□□□□□ -0.82
CACNA1C-231ENST00000616390 UQCRQO14949 82 aa9.91□□□□□ -0.82
CACNA1C-231ENST00000616390 LYRM7Q5U5X0 104 aa9.91□□□□□ -0.82
CACNA1C-231ENST00000616390 TEN1Q86WV5 123 aa9.91□□□□□ -0.82
CACNA1C-231ENST00000616390 LITAFQ99732 161 aa9.9□□□□□ -0.82
CACNA1C-231ENST00000616390 RNASE1P07998 156 aaKnown RBP9.9□□□□□ -0.82
CACNA1C-231ENST00000616390 PFN2P35080 140 aa9.89□□□□□ -0.83
CACNA1C-231ENST00000616390 GAGE2AQ6NT46 116 aa9.89□□□□□ -0.83
CACNA1C-231ENST00000616390 LINC00242Q5T6M2 205 aa9.88□□□□□ -0.83
CACNA1C-231ENST00000616390 TRGV4A0A0C4DH28 118 aa9.88□□□□□ -0.83
CACNA1C-231ENST00000616390 UBE2L6O14933 153 aa9.88□□□□□ -0.83
CACNA1C-231ENST00000616390 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
CACNA1C-231ENST00000616390 IGLV1-51P01701 117 aa9.88□□□□□ -0.83
CACNA1C-231ENST00000616390 Q9H8V8 135 aa9.88□□□□□ -0.83
CACNA1C-231ENST00000616390 J3QKU1 62 aa9.87□□□□□ -0.83
CACNA1C-231ENST00000616390 A0A0B4J2C4 111 aa9.87□□□□□ -0.83
CACNA1C-231ENST00000616390 DEFB130BP0DP73 79 aa9.87□□□□□ -0.83
CACNA1C-231ENST00000616390 DEFB130AP0DP74 79 aa9.87□□□□□ -0.83
CACNA1C-231ENST00000616390 OTOGQ6ZRI0 2925 aa9.86□□□□□ -0.83
CACNA1C-231ENST00000616390 TENM1Q9UKZ4 2725 aa9.86□□□□□ -0.83
CACNA1C-231ENST00000616390 PLAC8L1A1L4L8 177 aa9.86□□□□□ -0.83
CACNA1C-231ENST00000616390 DAZ2Q13117 558 aaKnown RBP9.86□□□□□ -0.83
CACNA1C-231ENST00000616390 MIAQ16674 131 aa9.86□□□□□ -0.83
CACNA1C-231ENST00000616390 DAZ4Q86SG3 579 aaKnown RBP9.86□□□□□ -0.83
CACNA1C-231ENST00000616390 DAZ3Q9NR90 486 aaKnown RBP9.86□□□□□ -0.83
CACNA1C-231ENST00000616390 C19orf73Q9NVV2 129 aa9.86□□□□□ -0.83
CACNA1C-231ENST00000616390 TRIAP1O43715 76 aa9.85□□□□□ -0.83
CACNA1C-231ENST00000616390 ANKRD29Q8N6D5 301 aa9.85□□□□□ -0.83
CACNA1C-231ENST00000616390 C16orf74Q96GX8 76 aa9.85□□□□□ -0.83
CACNA1C-231ENST00000616390 SLC25A20O43772 301 aa9.85□□□□□ -0.83
CACNA1C-231ENST00000616390 C16orf95Q9H693 158 aa9.85□□□□□ -0.83
CACNA1C-231ENST00000616390 TRBV10-1A0A0K0K1A3 114 aa9.84□□□□□ -0.83
CACNA1C-231ENST00000616390 HILS1P60008 231 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 CD164Q04900 197 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 CDC42SE2Q9NRR3 84 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 A0A0U1RQV1 116 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 KRTAP10-3P60369 221 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 TMEM243Q9BU79 118 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 SPANXDQ9BXN6 97 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 ATRQ13535 2644 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 TMEM258P61165 79 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 C15orf53Q8NAA6 179 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 CSNK1G2-AS1Q8NCQ2 148 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 CLEC2BQ92478 149 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 TOMM7Q9P0U1 55 aa9.83□□□□□ -0.84
CACNA1C-231ENST00000616390 CRYGAP11844 174 aa9.82□□□□□ -0.84
CACNA1C-231ENST00000616390 PRIMA1Q86XR5 153 aa9.82□□□□□ -0.84
CACNA1C-231ENST00000616390 SMIM1B2RUZ4 78 aa9.82□□□□□ -0.84
CACNA1C-231ENST00000616390 RPL13AP40429 203 aaKnown RBP9.82□□□□□ -0.84
CACNA1C-231ENST00000616390 CIRBPQ14011 172 aaKnown RBP9.82□□□□□ -0.84
CACNA1C-231ENST00000616390 ICOSQ9Y6W8 199 aa9.82□□□□□ -0.84
CACNA1C-231ENST00000616390 A0A096LPF7 62 aa9.81□□□□□ -0.84
CACNA1C-231ENST00000616390 NDUFA1O15239 70 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms