RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 IGLV4-69A0A075B6H9 119 aa7.41□□□□□ -1.22
MMP28-206ENST00000616383 TRAV13-1A0A0B4J241 112 aa7.41□□□□□ -1.22
MMP28-206ENST00000616383 C20orf202A1L168 122 aa7.41□□□□□ -1.22
MMP28-206ENST00000616383 SCGB1D1O95968 90 aa7.41□□□□□ -1.22
MMP28-206ENST00000616383 CRPP02741 224 aa7.41□□□□□ -1.22
MMP28-206ENST00000616383 UBE2D1P51668 147 aa7.41□□□□□ -1.22
MMP28-206ENST00000616383 REG3AQ06141 175 aa7.41□□□□□ -1.22
MMP28-206ENST00000616383 LGALS9CQ6DKI2 356 aa7.41□□□□□ -1.22
MMP28-206ENST00000616383 MRPL35Q9NZE8 188 aaKnown RBP7.41□□□□□ -1.22
MMP28-206ENST00000616383 A0A0J9YXV3 536 aa7.4□□□□□ -1.22
MMP28-206ENST00000616383 F8VRH5 84 aa7.4□□□□□ -1.22
MMP28-206ENST00000616383 UBE2WQ96B02 151 aa7.4□□□□□ -1.22
MMP28-206ENST00000616383 PRR34Q9NV39 138 aa7.4□□□□□ -1.22
MMP28-206ENST00000616383 LINC00959A0A1B0GUT2 108 aa7.39□□□□□ -1.23
MMP28-206ENST00000616383 C11orf86A6NJI1 115 aa7.39□□□□□ -1.23
MMP28-206ENST00000616383 DPM2O94777 84 aa7.39□□□□□ -1.23
MMP28-206ENST00000616383 IGLC3P0DOY3 106 aa7.39□□□□□ -1.23
MMP28-206ENST00000616383 JOSD1Q15040 202 aaPredicted RBP7.39□□□□□ -1.23
MMP28-206ENST00000616383 PYY3Q5JQD4 70 aa7.39□□□□□ -1.23
MMP28-206ENST00000616383 ENHOQ6UWT2 76 aa7.39□□□□□ -1.23
MMP28-206ENST00000616383 C10orf126Q8N4M7 172 aa7.39□□□□□ -1.23
MMP28-206ENST00000616383 LYSTQ99698 3801 aa7.39□□□□□ -1.23
MMP28-206ENST00000616383 CHAC1Q9BUX1 264 aa7.39□□□□□ -1.23
MMP28-206ENST00000616383 IGLV10-54A0A075B6I4 117 aa7.38□□□□□ -1.23
MMP28-206ENST00000616383 TRAV9-2A0A087WT02 112 aa7.38□□□□□ -1.23
MMP28-206ENST00000616383 SS18Q15532 418 aa7.38□□□□□ -1.23
MMP28-206ENST00000616383 LINC00242Q5T6M2 205 aa7.38□□□□□ -1.23
MMP28-206ENST00000616383 NFE4Q86UQ8 179 aa7.38□□□□□ -1.23
MMP28-206ENST00000616383 ATOH7Q8N100 152 aa7.38□□□□□ -1.23
MMP28-206ENST00000616383 LINC00476Q8WZB0 136 aa7.38□□□□□ -1.23
MMP28-206ENST00000616383 KRTAP1-5Q9BYS1 174 aa7.38□□□□□ -1.23
MMP28-206ENST00000616383 TINCRA0A1B0GVN0 87 aa7.37□□□□□ -1.23
MMP28-206ENST00000616383 IBA57-AS1B1ANH7 110 aa7.37□□□□□ -1.23
MMP28-206ENST00000616383 CCL25O15444 150 aa7.37□□□□□ -1.23
MMP28-206ENST00000616383 IGKCP01834 107 aa7.37□□□□□ -1.23
MMP28-206ENST00000616383 PLNP26678 52 aa7.37□□□□□ -1.23
MMP28-206ENST00000616383 MIAQ16674 131 aa7.37□□□□□ -1.23
MMP28-206ENST00000616383 FAM19A3Q7Z5A8 133 aa7.37□□□□□ -1.23
MMP28-206ENST00000616383 GEMIN7Q9H840 131 aaKnown RBP7.37□□□□□ -1.23
MMP28-206ENST00000616383 DNAH6Q9C0G6 4158 aa7.36□□□□□ -1.23
MMP28-206ENST00000616383 NBDYA0A0U1RRE5 68 aa7.36□□□□□ -1.23
MMP28-206ENST00000616383 K7EP13 123 aa7.36□□□□□ -1.23
MMP28-206ENST00000616383 LY6G6CO95867 125 aa7.36□□□□□ -1.23
MMP28-206ENST00000616383 XCL1P47992 114 aa7.36□□□□□ -1.23
MMP28-206ENST00000616383 SEC11AP67812 179 aa7.36□□□□□ -1.23
MMP28-206ENST00000616383 COX6A2Q02221 97 aa7.36□□□□□ -1.23
MMP28-206ENST00000616383 TTC32Q5I0X7 151 aa7.36□□□□□ -1.23
MMP28-206ENST00000616383 CHCHD10Q8WYQ3 142 aaPredicted RBP7.36□□□□□ -1.23
MMP28-206ENST00000616383 Q9HAA7 133 aa7.36□□□□□ -1.23
MMP28-206ENST00000616383 TRAV8-3A0A0A6YYJ7 113 aa7.35□□□□□ -1.23
MMP28-206ENST00000616383 TRAV8-4A0A0B4J246 113 aa7.35□□□□□ -1.23
MMP28-206ENST00000616383 SMIM6P0DI80 62 aa7.35□□□□□ -1.23
MMP28-206ENST00000616383 ZNF22P17026 224 aaPredicted RBP7.35□□□□□ -1.23
MMP28-206ENST00000616383 HERVK_113P63121 156 aa7.35□□□□□ -1.23
MMP28-206ENST00000616383 LINC00469Q8N7U9 141 aa7.35□□□□□ -1.23
MMP28-206ENST00000616383 BIRC6Q9NR09 4857 aa7.35□□□□□ -1.23
MMP28-206ENST00000616383 IGKV2D-24A0A075B6R9 120 aa7.34□□□□□ -1.23
MMP28-206ENST00000616383 IGLV5-45A0A087WSX0 123 aa7.34□□□□□ -1.23
MMP28-206ENST00000616383 TMEM238LA0A1B0GVL6 79 aa7.34□□□□□ -1.23
MMP28-206ENST00000616383 TMEM170BQ5T4T1 132 aa7.34□□□□□ -1.23
MMP28-206ENST00000616383 C1orf43Q9BWL3 253 aa7.34□□□□□ -1.23
MMP28-206ENST00000616383 CDKN2A-AS1Q9UH64 79 aa7.34□□□□□ -1.23
MMP28-206ENST00000616383 IGHV3OR16-9A0A0B4J2B5 98 aa7.33□□□□□ -1.24
MMP28-206ENST00000616383 GAGE12HA6NDE8 117 aa7.33□□□□□ -1.24
MMP28-206ENST00000616383 MAJINQ3KP22 176 aa7.33□□□□□ -1.24
MMP28-206ENST00000616383 KRTAP26-1Q6PEX3 210 aa7.33□□□□□ -1.24
MMP28-206ENST00000616383 CD164L2Q6UWJ8 174 aa7.33□□□□□ -1.24
MMP28-206ENST00000616383 hDV102S1A0JD36 115 aa7.32□□□□□ -1.24
MMP28-206ENST00000616383 H3BRM9 83 aa7.32□□□□□ -1.24
MMP28-206ENST00000616383 M0R2N4 97 aa7.32□□□□□ -1.24
MMP28-206ENST00000616383 SPINK8P0C7L1 97 aa7.32□□□□□ -1.24
MMP28-206ENST00000616383 FOXI1Q12951 378 aa7.32□□□□□ -1.24
MMP28-206ENST00000616383 C5orf38Q86SI9 138 aa7.32□□□□□ -1.24
MMP28-206ENST00000616383 RMI2Q96E14 147 aa7.32□□□□□ -1.24
MMP28-206ENST00000616383 TMEM223A0PJW6 202 aa7.31□□□□□ -1.24
MMP28-206ENST00000616383 HSBP1L1C9JCN9 74 aa7.31□□□□□ -1.24
MMP28-206ENST00000616383 COX7A2LO14548 114 aa7.31□□□□□ -1.24
MMP28-206ENST00000616383 Q6ZR54 194 aa7.31□□□□□ -1.24
MMP28-206ENST00000616383 STPG4Q8N801 248 aa7.31□□□□□ -1.24
MMP28-206ENST00000616383 VAMP8Q9BV40 100 aa7.31□□□□□ -1.24
MMP28-206ENST00000616383 IGHV3-64A0A075B6Q5 118 aa7.3□□□□□ -1.24
MMP28-206ENST00000616383 A0A087WZ39 114 aa7.3□□□□□ -1.24
MMP28-206ENST00000616383 HERVK_113P61574 105 aa7.3□□□□□ -1.24
MMP28-206ENST00000616383 ANKRD39Q53RE8 183 aa7.3□□□□□ -1.24
MMP28-206ENST00000616383 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
MMP28-206ENST00000616383 SMIM1B2RUZ4 78 aa7.29□□□□□ -1.24
MMP28-206ENST00000616383 C12orf57Q99622 126 aa7.29□□□□□ -1.24
MMP28-206ENST00000616383 TM2D2Q9BX73 214 aa7.29□□□□□ -1.24
MMP28-206ENST00000616383 PAM16Q9Y3D7 125 aa7.29□□□□□ -1.24
MMP28-206ENST00000616383 EPPK1P58107 5090 aaKnown RBP7.28□□□□□ -1.24
MMP28-206ENST00000616383 IGLV5-39A0A0G2JS06 123 aa7.28□□□□□ -1.24
MMP28-206ENST00000616383 LCE6AA0A183 80 aa7.28□□□□□ -1.24
MMP28-206ENST00000616383 H3BS24 57 aa7.28□□□□□ -1.24
MMP28-206ENST00000616383 MALP21145 153 aa7.28□□□□□ -1.24
MMP28-206ENST00000616383 S100A12P80511 92 aa7.28□□□□□ -1.24
MMP28-206ENST00000616383 SPATA45Q537H7 98 aa7.28□□□□□ -1.24
MMP28-206ENST00000616383 LINC01561Q8N1V8 128 aa7.28□□□□□ -1.24
MMP28-206ENST00000616383 COX11Q9Y6N1 276 aa7.28□□□□□ -1.24
MMP28-206ENST00000616383 IGKV2D-26A0A0A0MRZ7 120 aa7.27□□□□□ -1.25
MMP28-206ENST00000616383 IGHV1-58A0A0C4DH39 117 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms