RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 LINC00612Q8N6U2 182 aa13.47□□□□□ -0.25
MMP28-204ENST00000615136 J3QR89 54 aa13.46□□□□□ -0.25
MMP28-204ENST00000615136 CIDEAO60543 219 aa13.46□□□□□ -0.25
MMP28-204ENST00000615136 HERVK_113P63121 156 aa13.46□□□□□ -0.25
MMP28-204ENST00000615136 OXLD1Q5BKU9 147 aa13.46□□□□□ -0.25
MMP28-204ENST00000615136 KIR2DL5BQ8NHK3 375 aa13.46□□□□□ -0.25
MMP28-204ENST00000615136 PKD1L1Q8TDX9 2849 aa13.46□□□□□ -0.26
MMP28-204ENST00000615136 MIAQ16674 131 aa13.46□□□□□ -0.26
MMP28-204ENST00000615136 LINC00242Q5T6M2 205 aa13.46□□□□□ -0.26
MMP28-204ENST00000615136 ATP6V0E2Q8NHE4 81 aa13.46□□□□□ -0.26
MMP28-204ENST00000615136 TIMM17BO60830 172 aa13.45□□□□□ -0.26
MMP28-204ENST00000615136 ADAMTSL4-AS1Q5T5F5 129 aa13.45□□□□□ -0.26
MMP28-204ENST00000615136 GTSF1LQ9H1H1 148 aa13.45□□□□□ -0.26
MMP28-204ENST00000615136 IGLV5-39A0A0G2JS06 123 aa13.44□□□□□ -0.26
MMP28-204ENST00000615136 NDUFA1O15239 70 aa13.44□□□□□ -0.26
MMP28-204ENST00000615136 COX6A2Q02221 97 aa13.44□□□□□ -0.26
MMP28-204ENST00000615136 TMEM101Q96IK0 257 aa13.44□□□□□ -0.26
MMP28-204ENST00000615136 ERG28Q9UKR5 140 aa13.44□□□□□ -0.26
MMP28-204ENST00000615136 IGHV4-30-4P0DP06 118 aa13.44□□□□□ -0.26
MMP28-204ENST00000615136 SMAGPQ0VAQ4 97 aa13.44□□□□□ -0.26
MMP28-204ENST00000615136 PRIMA1Q86XR5 153 aa13.44□□□□□ -0.26
MMP28-204ENST00000615136 SMIM9A6NGZ8 99 aa13.43□□□□□ -0.26
MMP28-204ENST00000615136 FAM222AQ5U5X8 452 aa13.43□□□□□ -0.26
MMP28-204ENST00000615136 APOC4P55056 127 aa13.42□□□□□ -0.26
MMP28-204ENST00000615136 KRTAP10-11P60412 298 aa13.42□□□□□ -0.26
MMP28-204ENST00000615136 RNF183Q96D59 192 aa13.42□□□□□ -0.26
MMP28-204ENST00000615136 CDC42SE2Q9NRR3 84 aa13.42□□□□□ -0.26
MMP28-204ENST00000615136 IGHV4-28A0A0C4DH34 117 aa13.41□□□□□ -0.26
MMP28-204ENST00000615136 SCGB1C2P0DMR2 95 aa13.41□□□□□ -0.26
MMP28-204ENST00000615136 TMEM243Q9BU79 118 aa13.4□□□□□ -0.26
MMP28-204ENST00000615136 PRSS2P07478 247 aa13.4□□□□□ -0.26
MMP28-204ENST00000615136 SMIM1B2RUZ4 78 aa13.39□□□□□ -0.27
MMP28-204ENST00000615136 ANK2Q01484 3957 aa13.39□□□□□ -0.27
MMP28-204ENST00000615136 IFITM1P13164 125 aa13.39□□□□□ -0.27
MMP28-204ENST00000615136 C3orf56Q8N813 242 aa13.39□□□□□ -0.27
MMP28-204ENST00000615136 H7C423 109 aa13.38□□□□□ -0.27
MMP28-204ENST00000615136 FOXI1Q12951 378 aa13.38□□□□□ -0.27
MMP28-204ENST00000615136 Q8NAQ8 132 aa13.38□□□□□ -0.27
MMP28-204ENST00000615136 CELA1Q9UNI1 258 aa13.38□□□□□ -0.27
MMP28-204ENST00000615136 TRAV13-1A0A0B4J241 112 aa13.37□□□□□ -0.27
MMP28-204ENST00000615136 TRBV30A0A0K0K1B3 111 aa13.37□□□□□ -0.27
MMP28-204ENST00000615136 H7C2G1 150 aa13.37□□□□□ -0.27
MMP28-204ENST00000615136 SPATA25Q9BR10 227 aa13.37□□□□□ -0.27
MMP28-204ENST00000615136 UBE2L6O14933 153 aa13.37□□□□□ -0.27
MMP28-204ENST00000615136 Q1RN00 199 aa13.37□□□□□ -0.27
MMP28-204ENST00000615136 TEN1Q86WV5 123 aa13.37□□□□□ -0.27
MMP28-204ENST00000615136 F5H768 121 aa13.36□□□□□ -0.27
MMP28-204ENST00000615136 M0QXV9 152 aa13.35□□□□□ -0.27
MMP28-204ENST00000615136 Q9H8V8 135 aa13.35□□□□□ -0.27
MMP28-204ENST00000615136 GAGE12HA6NDE8 117 aa13.35□□□□□ -0.27
MMP28-204ENST00000615136 LYRM9A8MSI8 78 aa13.35□□□□□ -0.27
MMP28-204ENST00000615136 GYPEP15421 78 aa13.35□□□□□ -0.27
MMP28-204ENST00000615136 TRIAP1O43715 76 aa13.34□□□□□ -0.27
MMP28-204ENST00000615136 GAGE6Q13070 117 aa13.34□□□□□ -0.27
MMP28-204ENST00000615136 CIRBPQ14011 172 aaKnown RBP13.34□□□□□ -0.27
MMP28-204ENST00000615136 TRBV6-8A0A0A6YYG3 113 aa13.34□□□□□ -0.27
MMP28-204ENST00000615136 NPC2P61916 151 aa13.34□□□□□ -0.27
MMP28-204ENST00000615136 SHISA2Q6UWI4 295 aa13.33□□□□□ -0.28
MMP28-204ENST00000615136 PPDPFLQ8WWR9 84 aa13.33□□□□□ -0.28
MMP28-204ENST00000615136 ZNF625Q96I27 306 aaPredicted RBP13.33□□□□□ -0.28
MMP28-204ENST00000615136 A0A096LPF7 62 aa13.32□□□□□ -0.28
MMP28-204ENST00000615136 ATXN8Q156A1 80 aa13.32□□□□□ -0.28
MMP28-204ENST00000615136 ICOSQ9Y6W8 199 aa13.32□□□□□ -0.28
MMP28-204ENST00000615136 SLC25A20O43772 301 aa13.32□□□□□ -0.28
MMP28-204ENST00000615136 DAND5Q8N907 189 aa13.32□□□□□ -0.28
MMP28-204ENST00000615136 PRO0255Q9UI72 69 aa13.32□□□□□ -0.28
MMP28-204ENST00000615136 MIFP14174 115 aa13.31□□□□□ -0.28
MMP28-204ENST00000615136 COL6A5A8TX70 2615 aa13.31□□□□□ -0.28
MMP28-204ENST00000615136 IGLV4-60A0A075B6I1 120 aa13.3□□□□□ -0.28
MMP28-204ENST00000615136 C9JAW5 83 aa13.3□□□□□ -0.28
MMP28-204ENST00000615136 CARD19Q96LW7 228 aa13.3□□□□□ -0.28
MMP28-204ENST00000615136 EGFEM1PQ0D2K5 195 aa13.3□□□□□ -0.28
MMP28-204ENST00000615136 ANKRD29Q8N6D5 301 aa13.3□□□□□ -0.28
MMP28-204ENST00000615136 LINC00308Q8TCZ7 52 aa13.3□□□□□ -0.28
MMP28-204ENST00000615136 LINC01600Q96MT4 127 aa13.3□□□□□ -0.28
MMP28-204ENST00000615136 RETNQ9HD89 108 aa13.3□□□□□ -0.28
MMP28-204ENST00000615136 DNAH3Q8TD57 4116 aa13.29□□□□□ -0.28
MMP28-204ENST00000615136 DAD1P61803 113 aa13.29□□□□□ -0.28
MMP28-204ENST00000615136 LINC01620Q4KN68 170 aa13.29□□□□□ -0.28
MMP28-204ENST00000615136 SIGMAR1Q99720 223 aa13.29□□□□□ -0.28
MMP28-204ENST00000615136 CHCHD5Q9BSY4 110 aa13.29□□□□□ -0.28
MMP28-204ENST00000615136 HERV-K104P63124 156 aa13.29□□□□□ -0.28
MMP28-204ENST00000615136 PAX4O43316 350 aa13.28□□□□□ -0.28
MMP28-204ENST00000615136 RPL13AP40429 203 aaKnown RBP13.27□□□□□ -0.28
MMP28-204ENST00000615136 COPS9Q8WXC6 57 aa13.27□□□□□ -0.28
MMP28-204ENST00000615136 PPDPFQ9H3Y8 114 aa13.27□□□□□ -0.29
MMP28-204ENST00000615136 IGKV3OR2-268A0A0C4DH90 116 aa13.25□□□□□ -0.29
MMP28-204ENST00000615136 COX6CP09669 75 aa13.25□□□□□ -0.29
MMP28-204ENST00000615136 SOSTDC1Q6X4U4 206 aa13.25□□□□□ -0.29
MMP28-204ENST00000615136 TRAV26-1A0A087WT03 109 aa13.24□□□□□ -0.29
MMP28-204ENST00000615136 SPART-AS1P0CW21 52 aa13.24□□□□□ -0.29
MMP28-204ENST00000615136 MEIG1Q5JSS6 88 aa13.24□□□□□ -0.29
MMP28-204ENST00000615136 TRBV10-2A0A0K0K1G8 114 aa13.23□□□□□ -0.29
MMP28-204ENST00000615136 ATP5G1P05496 136 aa13.23□□□□□ -0.29
MMP28-204ENST00000615136 SCGB1A1P11684 91 aa13.23□□□□□ -0.29
MMP28-204ENST00000615136 HTN3P15516 51 aa13.23□□□□□ -0.29
MMP28-204ENST00000615136 CDIP1Q9H305 208 aa13.23□□□□□ -0.29
MMP28-204ENST00000615136 TENM3Q9P273 2699 aa13.22□□□□□ -0.29
MMP28-204ENST00000615136 A0A0U1RRA0 63 aa13.22□□□□□ -0.29
MMP28-204ENST00000615136 COX7B2Q8TF08 81 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms