RNA–Protein interactions for RNA: ENST00000609041.1

TAF4-208, Transcript of TATA-box binding protein associated factor 4, human

Gene TAF4, Length 2,487 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF4-208	ENST00000609041	RPL13A	P40429	203 aa	Known RBP	13.75	□□□□□ -0.21
TAF4-208	ENST00000609041	OVOL2	Q9BRP0	275 aa		13.75	□□□□□ -0.21
TAF4-208	ENST00000609041	LINC00308	Q8TCZ7	52 aa		13.74	□□□□□ -0.21
TAF4-208	ENST00000609041	TRBV6-4	A0A1B0GX49	114 aa		13.74	□□□□□ -0.21
TAF4-208	ENST00000609041	TRGV4	A0A0C4DH28	118 aa		13.73	□□□□□ -0.21
TAF4-208	ENST00000609041	HILS1	P60008	231 aa		13.73	□□□□□ -0.21
TAF4-208	ENST00000609041	TRBV10-2	A0A0K0K1G8	114 aa		13.73	□□□□□ -0.21
TAF4-208	ENST00000609041	COX6C	P09669	75 aa		13.73	□□□□□ -0.21
TAF4-208	ENST00000609041	PRIMA1	Q86XR5	153 aa		13.72	□□□□□ -0.21
TAF4-208	ENST00000609041	NTN5	Q8WTR8	489 aa	Predicted RBP	13.72	□□□□□ -0.21
TAF4-208	ENST00000609041	CLEC2B	Q92478	149 aa		13.72	□□□□□ -0.21
TAF4-208	ENST00000609041	ITPR2	Q14571	2701 aa		13.71	□□□□□ -0.21
TAF4-208	ENST00000609041	MT-ATP8	P03928	68 aa		13.71	□□□□□ -0.21
TAF4-208	ENST00000609041	XG	P55808	180 aa		13.71	□□□□□ -0.21
TAF4-208	ENST00000609041	SOSTDC1	Q6X4U4	206 aa		13.71	□□□□□ -0.21
TAF4-208	ENST00000609041	MEIG1	Q5JSS6	88 aa		13.7	□□□□□ -0.22
TAF4-208	ENST00000609041	CIDEA	O60543	219 aa		13.69	□□□□□ -0.22
TAF4-208	ENST00000609041	GAGE6	Q13070	117 aa		13.69	□□□□□ -0.22
TAF4-208	ENST00000609041	FHL2	Q14192	279 aa		13.69	□□□□□ -0.22
TAF4-208	ENST00000609041	LINC01600	Q96MT4	127 aa		13.69	□□□□□ -0.22
TAF4-208	ENST00000609041		H7C423	109 aa		13.69	□□□□□ -0.22
TAF4-208	ENST00000609041	SMR3A	Q99954	134 aa		13.69	□□□□□ -0.22
TAF4-208	ENST00000609041	TEX49	A0A1B0GTD5	131 aa		13.68	□□□□□ -0.22
TAF4-208	ENST00000609041	IGKV3OR2-268	A0A0C4DH90	116 aa		13.67	□□□□□ -0.22
TAF4-208	ENST00000609041	LST1	O00453	97 aa		13.67	□□□□□ -0.22
TAF4-208	ENST00000609041	KRTAP10-3	P60369	221 aa		13.67	□□□□□ -0.22
TAF4-208	ENST00000609041	C2orf82	Q6UX34	121 aa		13.67	□□□□□ -0.22
TAF4-208	ENST00000609041	IGLV4-60	A0A075B6I1	120 aa		13.66	□□□□□ -0.22
TAF4-208	ENST00000609041	TRBV6-8	A0A0A6YYG3	113 aa		13.66	□□□□□ -0.22
TAF4-208	ENST00000609041	HERV-K104	P63124	156 aa		13.66	□□□□□ -0.22
TAF4-208	ENST00000609041	TMEM262	E9PQX1	116 aa		13.65	□□□□□ -0.22
TAF4-208	ENST00000609041		J3QKU1	62 aa		13.64	□□□□□ -0.23
TAF4-208	ENST00000609041	DEFB130B	P0DP73	79 aa		13.64	□□□□□ -0.23
TAF4-208	ENST00000609041	DEFB130A	P0DP74	79 aa		13.64	□□□□□ -0.23
TAF4-208	ENST00000609041	COPS9	Q8WXC6	57 aa		13.64	□□□□□ -0.23
TAF4-208	ENST00000609041	PF4	P02776	101 aa		13.64	□□□□□ -0.23
TAF4-208	ENST00000609041	CHCHD5	Q9BSY4	110 aa		13.64	□□□□□ -0.23
TAF4-208	ENST00000609041	UBE2W	Q96B02	151 aa		13.63	□□□□□ -0.23
TAF4-208	ENST00000609041		H3BT86	120 aa		13.63	□□□□□ -0.23
TAF4-208	ENST00000609041	CRLF1	O75462	422 aa		13.62	□□□□□ -0.23
TAF4-208	ENST00000609041	UNC79	Q9P2D8	2635 aa		13.61	□□□□□ -0.23
TAF4-208	ENST00000609041	COX7B2	Q8TF08	81 aa		13.61	□□□□□ -0.23
TAF4-208	ENST00000609041	TOMM7	Q9P0U1	55 aa		13.61	□□□□□ -0.23
TAF4-208	ENST00000609041	LINC00482	Q8N8I6	264 aa		13.61	□□□□□ -0.23
TAF4-208	ENST00000609041	HIVEP2	P31629	2446 aa		13.6	□□□□□ -0.23
TAF4-208	ENST00000609041	SHISA2	Q6UWI4	295 aa		13.59	□□□□□ -0.23
TAF4-208	ENST00000609041	HELZ2	Q9BYK8	2649 aa	Known RBP	13.59	□□□□□ -0.23
TAF4-208	ENST00000609041	IGHV3OR16-9	A0A0B4J2B5	98 aa		13.59	□□□□□ -0.23
TAF4-208	ENST00000609041	KIR2DL5B	Q8NHK3	375 aa		13.58	□□□□□ -0.23
TAF4-208	ENST00000609041	FN1	P02751	2386 aa	Known RBP	13.58	□□□□□ -0.24
TAF4-208	ENST00000609041	COX7A2L	O14548	114 aa		13.58	□□□□□ -0.24
TAF4-208	ENST00000609041	LINC00612	Q8N6U2	182 aa		13.57	□□□□□ -0.24
TAF4-208	ENST00000609041	SVIP	Q8NHG7	77 aa		13.57	□□□□□ -0.24
TAF4-208	ENST00000609041	FASN	P49327	2511 aa	Known RBP	13.57	□□□□□ -0.24
TAF4-208	ENST00000609041	TRAV8-4	A0A0B4J246	113 aa		13.56	□□□□□ -0.24
TAF4-208	ENST00000609041		A0A1B0GV72	72 aa		13.56	□□□□□ -0.24
TAF4-208	ENST00000609041	CKS1B	P61024	79 aa		13.56	□□□□□ -0.24
TAF4-208	ENST00000609041	MIR7-3HG	Q8N6C7	128 aa		13.56	□□□□□ -0.24
TAF4-208	ENST00000609041	GYPE	P15421	78 aa		13.56	□□□□□ -0.24
TAF4-208	ENST00000609041	C5orf38	Q86SI9	138 aa		13.55	□□□□□ -0.24
TAF4-208	ENST00000609041		X6R8D5	127 aa		13.55	□□□□□ -0.24
TAF4-208	ENST00000609041	SPATA3	Q8NHX4	192 aa		13.55	□□□□□ -0.24
TAF4-208	ENST00000609041	PPDPF	Q9H3Y8	114 aa		13.55	□□□□□ -0.24
TAF4-208	ENST00000609041		A0A087WZ39	114 aa		13.54	□□□□□ -0.24
TAF4-208	ENST00000609041	LINC00959	A0A1B0GUT2	108 aa		13.53	□□□□□ -0.24
TAF4-208	ENST00000609041	LY6G6D	O95868	133 aa		13.52	□□□□□ -0.24
TAF4-208	ENST00000609041	LINC00158	P58513	81 aa		13.52	□□□□□ -0.25
TAF4-208	ENST00000609041	CITED1	Q99966	193 aa		13.51	□□□□□ -0.25
TAF4-208	ENST00000609041		A0A096LPF7	62 aa		13.51	□□□□□ -0.25
TAF4-208	ENST00000609041	LINC00337	Q8N6G1	96 aa		13.51	□□□□□ -0.25
TAF4-208	ENST00000609041	SND1-IT1	Q9HBX3	110 aa		13.51	□□□□□ -0.25
TAF4-208	ENST00000609041	IGKV2-28	A0A075B6P5	120 aa		13.5	□□□□□ -0.25
TAF4-208	ENST00000609041	IGKV2D-28	P01615	120 aa		13.5	□□□□□ -0.25
TAF4-208	ENST00000609041	TRAV13-2	A0A0B4J235	113 aa		13.5	□□□□□ -0.25
TAF4-208	ENST00000609041	SNCG	O76070	127 aa		13.49	□□□□□ -0.25
TAF4-208	ENST00000609041	DEFB121	Q5J5C9	76 aa		13.49	□□□□□ -0.25
TAF4-208	ENST00000609041	FAM218A	Q96MZ4	157 aa		13.49	□□□□□ -0.25
TAF4-208	ENST00000609041	PRO0255	Q9UI72	69 aa		13.49	□□□□□ -0.25
TAF4-208	ENST00000609041	GCN1	Q92616	2671 aa	Known RBP	13.49	□□□□□ -0.25
TAF4-208	ENST00000609041	CRP	P02741	224 aa		13.49	□□□□□ -0.25
TAF4-208	ENST00000609041	FAM222A	Q5U5X8	452 aa		13.49	□□□□□ -0.25
TAF4-208	ENST00000609041	SMIM9	A6NGZ8	99 aa		13.48	□□□□□ -0.25
TAF4-208	ENST00000609041	XCL1	P47992	114 aa		13.48	□□□□□ -0.25
TAF4-208	ENST00000609041	NBEAL2	Q6ZNJ1	2754 aa		13.48	□□□□□ -0.25
TAF4-208	ENST00000609041	PFN2	P35080	140 aa		13.48	□□□□□ -0.25
TAF4-208	ENST00000609041	CLPSL2	Q6UWE3	100 aa		13.48	□□□□□ -0.25
TAF4-208	ENST00000609041	IBA57-AS1	B1ANH7	110 aa		13.47	□□□□□ -0.25
TAF4-208	ENST00000609041	CCL18	P55774	89 aa		13.47	□□□□□ -0.25
TAF4-208	ENST00000609041	C11orf68	Q9H3H3	251 aa	Known RBP	13.47	□□□□□ -0.25
TAF4-208	ENST00000609041	TRAC	P01848	142 aa		13.47	□□□□□ -0.25
TAF4-208	ENST00000609041	VWF	P04275	2813 aa		13.46	□□□□□ -0.25
TAF4-208	ENST00000609041		A0A1B0GUV1	79 aa		13.46	□□□□□ -0.25
TAF4-208	ENST00000609041	DEFB4A	O15263	64 aa		13.46	□□□□□ -0.25
TAF4-208	ENST00000609041	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.46	□□□□□ -0.26
TAF4-208	ENST00000609041	RPL28	P46779	137 aa	Known RBP	13.46	□□□□□ -0.26
TAF4-208	ENST00000609041	C15orf53	Q8NAA6	179 aa		13.46	□□□□□ -0.26
TAF4-208	ENST00000609041	DEFB135	Q30KP9	77 aa		13.45	□□□□□ -0.26
TAF4-208	ENST00000609041	PAX4	O43316	350 aa		13.45	□□□□□ -0.26
TAF4-208	ENST00000609041	SS18	Q15532	418 aa		13.45	□□□□□ -0.26
TAF4-208	ENST00000609041	C6orf226	Q5I0X4	101 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms