RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ESRGQ1W209 222 aa14.77□□□□□ -0.05
USP6NL-204ENST00000606752 Q8N3U1 123 aa14.77□□□□□ -0.05
USP6NL-204ENST00000606752 HINT1P49773 126 aaPredicted RBP14.76□□□□□ -0.05
USP6NL-204ENST00000606752 LINC00269Q8N2A0 174 aa14.76□□□□□ -0.05
USP6NL-204ENST00000606752 CCL25O15444 150 aa14.76□□□□□ -0.05
USP6NL-204ENST00000606752 SS18Q15532 418 aa14.75□□□□□ -0.05
USP6NL-204ENST00000606752 BATFQ16520 125 aa14.75□□□□□ -0.05
USP6NL-204ENST00000606752 LBHQ53QV2 105 aaPredicted RBP14.73□□□□□ -0.05
USP6NL-204ENST00000606752 IGHV3OR16-9A0A0B4J2B5 98 aa14.73□□□□□ -0.05
USP6NL-204ENST00000606752 IGLV5-39A0A0G2JS06 123 aa14.73□□□□□ -0.05
USP6NL-204ENST00000606752 REG3AQ06141 175 aa14.73□□□□□ -0.05
USP6NL-204ENST00000606752 HSD52Q0P140 79 aa14.73□□□□□ -0.05
USP6NL-204ENST00000606752 CLPSL2Q6UWE3 100 aa14.73□□□□□ -0.05
USP6NL-204ENST00000606752 SMIM1B2RUZ4 78 aa14.72□□□□□ -0.05
USP6NL-204ENST00000606752 SCGB1D4Q6XE38 83 aa14.72□□□□□ -0.05
USP6NL-204ENST00000606752 BVES-AS1Q5T3Y7 98 aa14.71□□□□□ -0.05
USP6NL-204ENST00000606752 WFDC10BQ8IUB3 73 aa14.71□□□□□ -0.05
USP6NL-204ENST00000606752 IGLL5B9A064 214 aa14.69□□□□□ -0.06
USP6NL-204ENST00000606752 COL7A1Q02388 2944 aa14.69□□□□□ -0.06
USP6NL-204ENST00000606752 A0A087WZ39 114 aa14.69□□□□□ -0.06
USP6NL-204ENST00000606752 XCL1P47992 114 aa14.69□□□□□ -0.06
USP6NL-204ENST00000606752 ZFAND6Q6FIF0 208 aa14.69□□□□□ -0.06
USP6NL-204ENST00000606752 PRR34Q9NV39 138 aa14.69□□□□□ -0.06
USP6NL-204ENST00000606752 NDUFA12Q9UI09 145 aa14.69□□□□□ -0.06
USP6NL-204ENST00000606752 KLK12Q9UKR0 248 aa14.69□□□□□ -0.06
USP6NL-204ENST00000606752 STAB2Q8WWQ8 2551 aa14.68□□□□□ -0.06
USP6NL-204ENST00000606752 IGHV3-30P01768 117 aa14.68□□□□□ -0.06
USP6NL-204ENST00000606752 IGHV3-33P01772 117 aa14.68□□□□□ -0.06
USP6NL-204ENST00000606752 IGHV3-30-5P0DP03 117 aa14.68□□□□□ -0.06
USP6NL-204ENST00000606752 TAL2Q16559 108 aa14.67□□□□□ -0.06
USP6NL-204ENST00000606752 C5orf38Q86SI9 138 aa14.66□□□□□ -0.06
USP6NL-204ENST00000606752 CD164L2Q6UWJ8 174 aa14.66□□□□□ -0.06
USP6NL-204ENST00000606752 C10orf126Q8N4M7 172 aa14.66□□□□□ -0.06
USP6NL-204ENST00000606752 CHCHD10Q8WYQ3 142 aaPredicted RBP14.66□□□□□ -0.06
USP6NL-204ENST00000606752 COL5A1-AS1Q5SY13 56 aa14.65□□□□□ -0.06
USP6NL-204ENST00000606752 HIST1H4GQ99525 98 aa14.65□□□□□ -0.06
USP6NL-204ENST00000606752 LINC01556Q5JQF7 62 aa14.64□□□□□ -0.07
USP6NL-204ENST00000606752 ENHOQ6UWT2 76 aa14.64□□□□□ -0.07
USP6NL-204ENST00000606752 ORAOV1Q8WV07 137 aa14.64□□□□□ -0.07
USP6NL-204ENST00000606752 IGLV10-54A0A075B6I4 117 aa14.63□□□□□ -0.07
USP6NL-204ENST00000606752 A0A0J9YXY3 114 aa14.63□□□□□ -0.07
USP6NL-204ENST00000606752 NDUFA1O15239 70 aa14.63□□□□□ -0.07
USP6NL-204ENST00000606752 CCL18P55774 89 aa14.63□□□□□ -0.07
USP6NL-204ENST00000606752 LINC01561Q8N1V8 128 aa14.63□□□□□ -0.07
USP6NL-204ENST00000606752 GCSHP23434 173 aa14.62□□□□□ -0.07
USP6NL-204ENST00000606752 CEND1Q8N111 149 aa14.62□□□□□ -0.07
USP6NL-204ENST00000606752 TM2D2Q9BX73 214 aa14.62□□□□□ -0.07
USP6NL-204ENST00000606752 LINC00588Q9Y4M8 146 aa14.62□□□□□ -0.07
USP6NL-204ENST00000606752 SRSF9Q13242 221 aaKnown RBP eCLIP14.62□□□□□ -0.07
USP6NL-204ENST00000606752 SPANXB1Q9NS25 103 aaPredicted RBP14.62□□□□□ -0.07
USP6NL-204ENST00000606752 CRPP02741 224 aa14.61□□□□□ -0.07
USP6NL-204ENST00000606752 UBE2WQ96B02 151 aa14.61□□□□□ -0.07
USP6NL-204ENST00000606752 TRAV8-4A0A0B4J246 113 aa14.6□□□□□ -0.07
USP6NL-204ENST00000606752 COX7B2Q8TF08 81 aa14.6□□□□□ -0.07
USP6NL-204ENST00000606752 COX7A2LO14548 114 aa14.59□□□□□ -0.07
USP6NL-204ENST00000606752 DNAH10OSP0CZ25 163 aa14.59□□□□□ -0.07
USP6NL-204ENST00000606752 Q9H8V8 135 aa14.59□□□□□ -0.07
USP6NL-204ENST00000606752 MEGF8Q7Z7M0 2845 aa14.59□□□□□ -0.07
USP6NL-204ENST00000606752 FOXI1Q12951 378 aa14.58□□□□□ -0.08
USP6NL-204ENST00000606752 ZNF625Q96I27 306 aaPredicted RBP14.58□□□□□ -0.08
USP6NL-204ENST00000606752 PRKDCP78527 4128 aaKnown RBP14.58□□□□□ -0.08
USP6NL-204ENST00000606752 FXYD2P54710 66 aa14.57□□□□□ -0.08
USP6NL-204ENST00000606752 MIAQ16674 131 aa14.57□□□□□ -0.08
USP6NL-204ENST00000606752 TOMM7Q9P0U1 55 aa14.57□□□□□ -0.08
USP6NL-204ENST00000606752 TMEM238C9JI98 176 aa14.57□□□□□ -0.08
USP6NL-204ENST00000606752 PTTG1IPP53801 180 aa14.57□□□□□ -0.08
USP6NL-204ENST00000606752 GAGE12HA6NDE8 117 aa14.56□□□□□ -0.08
USP6NL-204ENST00000606752 A6NDN8 102 aa14.56□□□□□ -0.08
USP6NL-204ENST00000606752 HERV-K104P63124 156 aa14.55□□□□□ -0.08
USP6NL-204ENST00000606752 LITAFQ99732 161 aa14.55□□□□□ -0.08
USP6NL-204ENST00000606752 UPK3BQ9BT76 320 aa14.55□□□□□ -0.08
USP6NL-204ENST00000606752 K7EP13 123 aa14.55□□□□□ -0.08
USP6NL-204ENST00000606752 TIMM17BO60830 172 aa14.55□□□□□ -0.08
USP6NL-204ENST00000606752 MALP21145 153 aa14.55□□□□□ -0.08
USP6NL-204ENST00000606752 APLNQ9ULZ1 77 aa14.55□□□□□ -0.08
USP6NL-204ENST00000606752 NUPR2A6NF83 97 aa14.52□□□□□ -0.08
USP6NL-204ENST00000606752 CIRBPQ14011 172 aaKnown RBP14.52□□□□□ -0.08
USP6NL-204ENST00000606752 C6orf226Q5I0X4 101 aa14.52□□□□□ -0.08
USP6NL-204ENST00000606752 Q8IZM0 81 aa14.52□□□□□ -0.08
USP6NL-204ENST00000606752 PRSS2P07478 247 aa14.52□□□□□ -0.09
USP6NL-204ENST00000606752 ADAMTSL4-AS1Q5T5F5 129 aa14.51□□□□□ -0.09
USP6NL-204ENST00000606752 Q6ZVH6 145 aa14.51□□□□□ -0.09
USP6NL-204ENST00000606752 SFTA2Q6UW10 78 aa14.5□□□□□ -0.09
USP6NL-204ENST00000606752 SPANXDQ9BXN6 97 aa14.5□□□□□ -0.09
USP6NL-204ENST00000606752 SPANXCQ9NY87 97 aa14.5□□□□□ -0.09
USP6NL-204ENST00000606752 KLK5Q9Y337 293 aaPredicted RBP14.5□□□□□ -0.09
USP6NL-204ENST00000606752 APOMO95445 188 aa14.5□□□□□ -0.09
USP6NL-204ENST00000606752 A0A1B0GV90 55 aa14.49□□□□□ -0.09
USP6NL-204ENST00000606752 TMEM238LA0A1B0GVL6 79 aa14.49□□□□□ -0.09
USP6NL-204ENST00000606752 A6NJY4 79 aa14.49□□□□□ -0.09
USP6NL-204ENST00000606752 TAX1BP3O14907 124 aa14.48□□□□□ -0.09
USP6NL-204ENST00000606752 KRTAP26-1Q6PEX3 210 aa14.48□□□□□ -0.09
USP6NL-204ENST00000606752 NHP2Q9NX24 153 aaKnown RBP14.48□□□□□ -0.09
USP6NL-204ENST00000606752 SMIM13P0DJ93 91 aa14.48□□□□□ -0.09
USP6NL-204ENST00000606752 KIAA0087Q14695 138 aa14.48□□□□□ -0.09
USP6NL-204ENST00000606752 MEIG1Q5JSS6 88 aa14.48□□□□□ -0.09
USP6NL-204ENST00000606752 MUSTN1Q8IVN3 82 aa14.48□□□□□ -0.09
USP6NL-204ENST00000606752 IBA57-AS1B1ANH7 110 aa14.47□□□□□ -0.09
USP6NL-204ENST00000606752 C1orf43Q9BWL3 253 aa14.47□□□□□ -0.09
USP6NL-204ENST00000606752 CFAP161Q6P656 301 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms