RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 NCR3O14931 201 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 LECT2O14960 151 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 IGKV3-20P01619 116 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 CCL18P55774 89 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 LINC01547P58512 204 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 ESRGQ1W209 222 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 FAM74A4Q5TZK3 123 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 DGAT2L7PQ6IED9 249 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 Q6ZQT0 140 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 Q8N814 137 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 C11orf44Q8N8P7 122 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 RMI2Q96E14 147 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 RHPN1-AS1Q9BWJ2 59 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 CDC42SE2Q9NRR3 84 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 MED13LQ71F56 2210 aa2.83□□□□□ -1.96
HMGB1P50-201ENST00000605814 IGHV3-49A0A0A0MS15 119 aa2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 TRAV10A0A0B4J240 114 aa2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 IGHV3-38A0A0C4DH36 116 aa2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 TRBV10-1A0A0K0K1A3 114 aa2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 A0A0U1RQV1 116 aa2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 K7EQG2 157 aa2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 HOXD3P31249 432 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 NBL1P41271 181 aa2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 UNQ9165/PRO28630Q6UXU0 137 aa2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 C5orf56Q8N8D9 126 aa2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 PTPRQQ9UMZ3 2332 aa2.82□□□□□ -1.96
HMGB1P50-201ENST00000605814 RANBP2P49792 3224 aaKnown RBP2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 A0A087WZ39 114 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 LCE6AA0A183 80 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 TMEM89A2RUT3 159 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 LYRM9A8MSI8 78 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 G3V318 75 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 LY6HO94772 140 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 IGHV4-31P0DP07 118 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 SAA4P35542 130 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 LMO4P61968 165 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 ECSCRQ19T08 205 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 Q6ZVQ6 151 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 C11orf72Q8NBR9 251 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 MUC7Q8TAX7 377 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 TMEM254Q8TBM7 123 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 COX7B2Q8TF08 81 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 DEFB104AQ8WTQ1 72 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 BPESC1Q9GZL8 116 aa2.81□□□□□ -1.96
HMGB1P50-201ENST00000605814 ROS1P08922 2347 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 DOPEY2Q9Y3R5 2298 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 IGHV4-30-2A0A087WSY4 118 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 A0A0U1RRA0 63 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 A0A1B0GW54 56 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 hDV103S1A0JD37 113 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 DEFB1P60022 68 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 SNRPD3P62318 126 aaKnown RBP2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 PRB3Q04118 309 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 COX17Q14061 63 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 DEFB114Q30KQ6 69 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 LINC00575Q6W349 94 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 NTM-AS1Q6ZSK4 140 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 TM2D3Q9BRN9 247 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 CYP4F30PQ9H0H9 118 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 MOB4Q9Y3A3 225 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 CACNA1BQ00975 2339 aa2.8□□□□□ -1.96
HMGB1P50-201ENST00000605814 A0A096LNT2 108 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 IGHV3OR16-9A0A0B4J2B5 98 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 PRYO14603 147 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 PLA2G2AP14555 144 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 FUSP35637 526 aaKnown RBP eCLIP2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 LINC00158P58513 81 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 NREPQ16612 68 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 FBXL19-AS1Q494R0 122 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 RNASE13Q5GAN3 156 aaKnown RBP2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 ATP1A1-AS1Q5TC04 95 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 WFDC9Q8NEX5 89 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 OCR1Q9BZK8 76 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 SNURFQ9Y675 71 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 BRCA2P51587 3418 aa2.79□□□□□ -1.96
HMGB1P50-201ENST00000605814 TECTAO75443 2155 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 NBEAQ8NFP9 2946 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 CNOT1A5YKK6 2376 aaKnown RBP2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 TPRP12270 2363 aaKnown RBP2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 LYNX1G3V0Z9 82 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 BPY2O14599 106 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 IGHV4-59P01825 116 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 LYNX1P0DP58 116 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 FAM229BQ4G0N7 80 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 Q6ZTI0 123 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 PHF5AQ7RTV0 110 aaKnown RBP2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 STHQ8IWL8 128 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 Q9UF83 564 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 SZT2Q5T011 3432 aa2.78□□□□□ -1.96
HMGB1P50-201ENST00000605814 CEP250Q9BV73 2442 aa2.78□□□□□ -1.97
HMGB1P50-201ENST00000605814 PCNX1Q96RV3 2341 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 PKDREJQ9NTG1 2253 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 COL6A3P12111 3177 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 USP34Q70CQ2 3546 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 IGHV4-28A0A0C4DH34 117 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 NDUFS5O43920 106 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 GNLYP22749 145 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 HAMPP81172 84 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 SPINK13Q1W4C9 94 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms