RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 HNRNPA3P51991 378 aaKnown RBP8.76□□□□□ -1.01
ZNF548-210ENST00000600442 ESRGQ1W209 222 aa8.76□□□□□ -1.01
ZNF548-210ENST00000600442 FAM104AQ969W3 186 aa8.76□□□□□ -1.01
ZNF548-210ENST00000600442 PLECQ15149 4684 aaKnown RBP8.76□□□□□ -1.01
ZNF548-210ENST00000600442 TRAV8-4A0A0B4J246 113 aa8.75□□□□□ -1.01
ZNF548-210ENST00000600442 ANKRD39Q53RE8 183 aa8.75□□□□□ -1.01
ZNF548-210ENST00000600442 LINC00242Q5T6M2 205 aa8.75□□□□□ -1.01
ZNF548-210ENST00000600442 LINC00269Q8N2A0 174 aa8.75□□□□□ -1.01
ZNF548-210ENST00000600442 MRPS16Q9Y3D3 137 aaKnown RBP8.75□□□□□ -1.01
ZNF548-210ENST00000600442 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
ZNF548-210ENST00000600442 LINC00959A0A1B0GUT2 108 aa8.74□□□□□ -1.01
ZNF548-210ENST00000600442 TMEM223A0PJW6 202 aa8.74□□□□□ -1.01
ZNF548-210ENST00000600442 K7EP13 123 aa8.74□□□□□ -1.01
ZNF548-210ENST00000600442 LEPROTO15243 131 aa8.74□□□□□ -1.01
ZNF548-210ENST00000600442 SIVA1O15304 175 aa8.74□□□□□ -1.01
ZNF548-210ENST00000600442 REG3AQ06141 175 aa8.74□□□□□ -1.01
ZNF548-210ENST00000600442 LINC01556Q5JQF7 62 aa8.73□□□□□ -1.01
ZNF548-210ENST00000600442 C10orf126Q8N4M7 172 aa8.73□□□□□ -1.01
ZNF548-210ENST00000600442 IGHV1-58A0A0C4DH39 117 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 MYMXA0A1B0GTQ4 84 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 J3QQQ9 107 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 IGHV3-30P01768 117 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 IGHV3-33P01772 117 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 IGHV3-30-3P0DP02 117 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 IGHV3-30-5P0DP03 117 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 MIAQ16674 131 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 SFTA2Q6UW10 78 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 UBE2DNLQ8IWF7 75 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 BOD1L2Q8IYS8 172 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 LINC01561Q8N1V8 128 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 CDKN2A-AS1Q9UH64 79 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 KLK12Q9UKR0 248 aa8.72□□□□□ -1.01
ZNF548-210ENST00000600442 ZNF815PA8K554 130 aa8.71□□□□□ -1.02
ZNF548-210ENST00000600442 DNAH10OSP0CZ25 163 aa8.71□□□□□ -1.02
ZNF548-210ENST00000600442 MALP21145 153 aa8.71□□□□□ -1.02
ZNF548-210ENST00000600442 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.02
ZNF548-210ENST00000600442 SCGB1D4Q6XE38 83 aa8.71□□□□□ -1.02
ZNF548-210ENST00000600442 COX7A2LO14548 114 aa8.7□□□□□ -1.02
ZNF548-210ENST00000600442 APOMO95445 188 aa8.7□□□□□ -1.02
ZNF548-210ENST00000600442 XCL1P47992 114 aa8.7□□□□□ -1.02
ZNF548-210ENST00000600442 WFDC10BQ8IUB3 73 aa8.7□□□□□ -1.02
ZNF548-210ENST00000600442 RMI2Q96E14 147 aa8.7□□□□□ -1.02
ZNF548-210ENST00000600442 UPK3BQ9BT76 320 aa8.7□□□□□ -1.02
ZNF548-210ENST00000600442 PRR34Q9NV39 138 aa8.7□□□□□ -1.02
ZNF548-210ENST00000600442 A0A087WZ39 114 aa8.69□□□□□ -1.02
ZNF548-210ENST00000600442 TRAV8-3A0A0A6YYJ7 113 aa8.69□□□□□ -1.02
ZNF548-210ENST00000600442 PRSS2P07478 247 aa8.69□□□□□ -1.02
ZNF548-210ENST00000600442 SPINK8P0C7L1 97 aa8.69□□□□□ -1.02
ZNF548-210ENST00000600442 CLPSL2Q6UWE3 100 aa8.69□□□□□ -1.02
ZNF548-210ENST00000600442 CHCHD10Q8WYQ3 142 aaPredicted RBP8.69□□□□□ -1.02
ZNF548-210ENST00000600442 UBE2WQ96B02 151 aa8.69□□□□□ -1.02
ZNF548-210ENST00000600442 LINC00588Q9Y4M8 146 aa8.69□□□□□ -1.02
ZNF548-210ENST00000600442 IGHV3-64A0A075B6Q5 118 aa8.68□□□□□ -1.02
ZNF548-210ENST00000600442 IGKV2D-26A0A0A0MRZ7 120 aa8.68□□□□□ -1.02
ZNF548-210ENST00000600442 IGHV3OR16-9A0A0B4J2B5 98 aa8.68□□□□□ -1.02
ZNF548-210ENST00000600442 M0R143 59 aa8.68□□□□□ -1.02
ZNF548-210ENST00000600442 GCSHP23434 173 aa8.68□□□□□ -1.02
ZNF548-210ENST00000600442 COX6A2Q02221 97 aa8.68□□□□□ -1.02
ZNF548-210ENST00000600442 CIRBPQ14011 172 aaKnown RBP8.68□□□□□ -1.02
ZNF548-210ENST00000600442 PCP2Q8IVA1 136 aa8.68□□□□□ -1.02
ZNF548-210ENST00000600442 LINC00587B1AMM8 73 aa8.67□□□□□ -1.02
ZNF548-210ENST00000600442 C1orf43Q9BWL3 253 aa8.67□□□□□ -1.02
ZNF548-210ENST00000600442 HIGD1BQ9P298 99 aa8.67□□□□□ -1.02
ZNF548-210ENST00000600442 APLNQ9ULZ1 77 aa8.67□□□□□ -1.02
ZNF548-210ENST00000600442 FRAS1Q86XX4 4008 aa8.66□□□□□ -1.02
ZNF548-210ENST00000600442 IGLV5-39A0A0G2JS06 123 aa8.66□□□□□ -1.02
ZNF548-210ENST00000600442 SMIM1B2RUZ4 78 aa8.66□□□□□ -1.02
ZNF548-210ENST00000600442 HERV-K104P63124 156 aa8.66□□□□□ -1.02
ZNF548-210ENST00000600442 CTAG1AP78358 180 aa8.66□□□□□ -1.02
ZNF548-210ENST00000600442 Q9H8V8 135 aa8.66□□□□□ -1.02
ZNF548-210ENST00000600442 NDUFA12Q9UI09 145 aa8.66□□□□□ -1.02
ZNF548-210ENST00000600442 COX11Q9Y6N1 276 aa8.66□□□□□ -1.02
ZNF548-210ENST00000600442 ALMS1Q8TCU4 4167 aa8.65□□□□□ -1.02
ZNF548-210ENST00000600442 IGLV10-54A0A075B6I4 117 aa8.65□□□□□ -1.02
ZNF548-210ENST00000600442 C6orf226Q5I0X4 101 aa8.65□□□□□ -1.02
ZNF548-210ENST00000600442 CFAP161Q6P656 301 aa8.65□□□□□ -1.02
ZNF548-210ENST00000600442 C5orf38Q86SI9 138 aa8.65□□□□□ -1.02
ZNF548-210ENST00000600442 COPS9Q8WXC6 57 aa8.65□□□□□ -1.02
ZNF548-210ENST00000600442 GAGE12HA6NDE8 117 aa8.64□□□□□ -1.03
ZNF548-210ENST00000600442 TMEM238C9JI98 176 aa8.64□□□□□ -1.03
ZNF548-210ENST00000600442 HSD52Q0P140 79 aa8.64□□□□□ -1.03
ZNF548-210ENST00000600442 SRSF9Q13242 221 aaKnown RBP eCLIP8.64□□□□□ -1.038e-6■■□□□ 11.7
ZNF548-210ENST00000600442 TAL2Q16559 108 aa8.64□□□□□ -1.03
ZNF548-210ENST00000600442 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
ZNF548-210ENST00000600442 ENHOQ6UWT2 76 aa8.64□□□□□ -1.03
ZNF548-210ENST00000600442 COX7B2Q8TF08 81 aa8.64□□□□□ -1.03
ZNF548-210ENST00000600442 TOMM7Q9P0U1 55 aa8.64□□□□□ -1.03
ZNF548-210ENST00000600442 IBA57-AS1B1ANH7 110 aa8.63□□□□□ -1.03
ZNF548-210ENST00000600442 NDUFA1O15239 70 aa8.63□□□□□ -1.03
ZNF548-210ENST00000600442 CXCL5P42830 114 aa8.63□□□□□ -1.03
ZNF548-210ENST00000600442 CKS1BP61024 79 aa8.63□□□□□ -1.03
ZNF548-210ENST00000600442 Q8N3U1 123 aa8.63□□□□□ -1.03
ZNF548-210ENST00000600442 MAPKAPK5-AS1Q8N8E1 139 aa8.63□□□□□ -1.03
ZNF548-210ENST00000600442 HIST1H4GQ99525 98 aa8.63□□□□□ -1.03
ZNF548-210ENST00000600442 TM2D2Q9BX73 214 aa8.63□□□□□ -1.03
ZNF548-210ENST00000600442 FOXI1Q12951 378 aa8.62□□□□□ -1.03
ZNF548-210ENST00000600442 Q6ZVH6 145 aa8.62□□□□□ -1.03
ZNF548-210ENST00000600442 IGKV2D-24A0A075B6R9 120 aa8.61□□□□□ -1.03
ZNF548-210ENST00000600442 TMEM238LA0A1B0GVL6 79 aa8.61□□□□□ -1.03
ZNF548-210ENST00000600442 A6NJY4 79 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms