RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 HOXD3P31249 432 aaPredicted RBP11.14□□□□□ -0.63
IRF3-219ENST00000597636 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
IRF3-219ENST00000597636 NF1P21359 2839 aa11.14□□□□□ -0.63
IRF3-219ENST00000597636 COX7CP15954 63 aa11.14□□□□□ -0.63
IRF3-219ENST00000597636 C11orf72Q8NBR9 251 aa11.14□□□□□ -0.63
IRF3-219ENST00000597636 J3QKU1 62 aa11.13□□□□□ -0.63
IRF3-219ENST00000597636 HIST2H2BDQ6DRA6 164 aa11.13□□□□□ -0.63
IRF3-219ENST00000597636 AVPP01185 164 aa11.13□□□□□ -0.63
IRF3-219ENST00000597636 MSMBP08118 114 aa11.13□□□□□ -0.63
IRF3-219ENST00000597636 RS1O15537 224 aa11.12□□□□□ -0.63
IRF3-219ENST00000597636 IGHV4-59P01825 116 aa11.12□□□□□ -0.63
IRF3-219ENST00000597636 MALP21145 153 aa11.12□□□□□ -0.63
IRF3-219ENST00000597636 TRAV13-1A0A0B4J241 112 aa11.12□□□□□ -0.63
IRF3-219ENST00000597636 Q9HAA7 133 aa11.12□□□□□ -0.63
IRF3-219ENST00000597636 C2orf48Q96LS8 159 aa11.11□□□□□ -0.63
IRF3-219ENST00000597636 RPL28P46779 137 aaKnown RBP11.11□□□□□ -0.63
IRF3-219ENST00000597636 HIST1H4AP62805 103 aaKnown RBP11.11□□□□□ -0.63
IRF3-219ENST00000597636 KLK5Q9Y337 293 aaPredicted RBP11.11□□□□□ -0.63
IRF3-219ENST00000597636 F5H768 121 aa11.1□□□□□ -0.63
IRF3-219ENST00000597636 PF4P02776 101 aa11.1□□□□□ -0.63
IRF3-219ENST00000597636 CSDC2Q9Y534 153 aaKnown RBP11.1□□□□□ -0.63
IRF3-219ENST00000597636 TRAV13-2A0A0B4J235 113 aa11.1□□□□□ -0.63
IRF3-219ENST00000597636 CRYGAP11844 174 aa11.09□□□□□ -0.63
IRF3-219ENST00000597636 LOC107984640A0A0U1RRK4 108 aa11.09□□□□□ -0.63
IRF3-219ENST00000597636 ATOX1O00244 68 aa11.08□□□□□ -0.64
IRF3-219ENST00000597636 DEFB112Q30KQ8 113 aa11.08□□□□□ -0.64
IRF3-219ENST00000597636 LRRC75A-AS1Q8N1F1 130 aa11.08□□□□□ -0.64
IRF3-219ENST00000597636 PDZD2O15018 2839 aa11.07□□□□□ -0.64
IRF3-219ENST00000597636 A0A1B0GX51 115 aa11.07□□□□□ -0.64
IRF3-219ENST00000597636 CRPP02741 224 aa11.07□□□□□ -0.64
IRF3-219ENST00000597636 UBE2E2Q96LR5 201 aa11.07□□□□□ -0.64
IRF3-219ENST00000597636 LINC00337Q8N6G1 96 aa11.06□□□□□ -0.64
IRF3-219ENST00000597636 CDC42SE2Q9NRR3 84 aa11.06□□□□□ -0.64
IRF3-219ENST00000597636 J3KT08 172 aa11.06□□□□□ -0.64
IRF3-219ENST00000597636 NTM-AS1Q6ZSK4 140 aa11.06□□□□□ -0.64
IRF3-219ENST00000597636 Q96MF0 132 aa11.06□□□□□ -0.64
IRF3-219ENST00000597636 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
IRF3-219ENST00000597636 DNAL4O96015 105 aa11.06□□□□□ -0.64
IRF3-219ENST00000597636 IGKV2-28A0A075B6P5 120 aa11.05□□□□□ -0.64
IRF3-219ENST00000597636 INSP01308 110 aa11.05□□□□□ -0.64
IRF3-219ENST00000597636 IGKV2D-28P01615 120 aa11.05□□□□□ -0.64
IRF3-219ENST00000597636 SLURP1P55000 103 aa11.04□□□□□ -0.64
IRF3-219ENST00000597636 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
IRF3-219ENST00000597636 B4DSR2 109 aa11.04□□□□□ -0.64
IRF3-219ENST00000597636 RPL36AP83881 106 aaKnown RBP11.04□□□□□ -0.64
IRF3-219ENST00000597636 DEFB113Q30KQ7 82 aa11.04□□□□□ -0.64
IRF3-219ENST00000597636 MIR7-3HGQ8N6C7 128 aa11.04□□□□□ -0.64
IRF3-219ENST00000597636 WFDC11Q8NEX6 87 aa11.04□□□□□ -0.64
IRF3-219ENST00000597636 RPL36ALQ969Q0 106 aaKnown RBP11.04□□□□□ -0.64
IRF3-219ENST00000597636 A0A087WYN8 130 aa11.03□□□□□ -0.64
IRF3-219ENST00000597636 RPL18AQ02543 176 aaKnown RBP11.03□□□□□ -0.64
IRF3-219ENST00000597636 MAP6D1Q9H9H5 199 aa11.03□□□□□ -0.64
IRF3-219ENST00000597636 SND1-IT1Q9HBX3 110 aa11.03□□□□□ -0.64
IRF3-219ENST00000597636 hADV29S1A0JD25 119 aa11.03□□□□□ -0.64
IRF3-219ENST00000597636 C14orf132Q9NPU4 83 aa11.03□□□□□ -0.64
IRF3-219ENST00000597636 SMIM11BQ8TCY0 68 aa11.02□□□□□ -0.64
IRF3-219ENST00000597636 CR1P17927 2039 aa11.02□□□□□ -0.65
IRF3-219ENST00000597636 RPS28P62857 69 aaKnown RBP11.02□□□□□ -0.65
IRF3-219ENST00000597636 OBSCN-AS1Q96MR7 158 aa11.02□□□□□ -0.65
IRF3-219ENST00000597636 TRBV10-1A0A0K0K1A3 114 aa11.02□□□□□ -0.65
IRF3-219ENST00000597636 DEFB136Q30KP8 78 aa11.02□□□□□ -0.65
IRF3-219ENST00000597636 Q6JHZ5 121 aa11.02□□□□□ -0.65
IRF3-219ENST00000597636 FAM19A5Q7Z5A7 132 aaPredicted RBP11.01□□□□□ -0.65
IRF3-219ENST00000597636 TRGV1A0A0A0MS02 117 aa11.01□□□□□ -0.65
IRF3-219ENST00000597636 IGKV3D-7A0A0C4DH55 119 aa11.01□□□□□ -0.65
IRF3-219ENST00000597636 H0YGX0 51 aa11.01□□□□□ -0.65
IRF3-219ENST00000597636 K7EQD1 137 aa11.01□□□□□ -0.65
IRF3-219ENST00000597636 LINC00846Q9NV44 126 aa11.01□□□□□ -0.65
IRF3-219ENST00000597636 C18orf65Q6ZTR6 163 aa11□□□□□ -0.65
IRF3-219ENST00000597636 COX7B2Q8TF08 81 aa11□□□□□ -0.65
IRF3-219ENST00000597636 CYSTM1Q9H1C7 97 aa11□□□□□ -0.65
IRF3-219ENST00000597636 XCL2Q9UBD3 114 aa10.99□□□□□ -0.65
IRF3-219ENST00000597636 AKAP9Q99996 3911 aa10.99□□□□□ -0.65
IRF3-219ENST00000597636 ZNF702PQ9H963 129 aa10.99□□□□□ -0.65
IRF3-219ENST00000597636 IL17DQ8TAD2 202 aa10.98□□□□□ -0.65
IRF3-219ENST00000597636 A0A096LNT2 108 aa10.98□□□□□ -0.65
IRF3-219ENST00000597636 LINC00158P58513 81 aa10.98□□□□□ -0.65
IRF3-219ENST00000597636 SERP2Q8N6R1 65 aa10.98□□□□□ -0.65
IRF3-219ENST00000597636 CCL18P55774 89 aa10.97□□□□□ -0.65
IRF3-219ENST00000597636 LINC01356Q8N9X3 169 aa10.97□□□□□ -0.65
IRF3-219ENST00000597636 TOMM7Q9P0U1 55 aa10.97□□□□□ -0.65
IRF3-219ENST00000597636 UBE2L6O14933 153 aa10.97□□□□□ -0.65
IRF3-219ENST00000597636 C5orf47Q569G3 176 aa10.97□□□□□ -0.65
IRF3-219ENST00000597636 TMEM243Q9BU79 118 aa10.97□□□□□ -0.65
IRF3-219ENST00000597636 SMIM9A6NGZ8 99 aa10.96□□□□□ -0.65
IRF3-219ENST00000597636 LECT2O14960 151 aa10.96□□□□□ -0.65
IRF3-219ENST00000597636 C1orf158Q8N1D5 194 aa10.96□□□□□ -0.65
IRF3-219ENST00000597636 OTOGQ6ZRI0 2925 aa10.96□□□□□ -0.65
IRF3-219ENST00000597636 A0A087WVE0 104 aa10.96□□□□□ -0.66
IRF3-219ENST00000597636 Q6ZTI0 123 aa10.96□□□□□ -0.66
IRF3-219ENST00000597636 IGHV4-31P0DP07 118 aa10.95□□□□□ -0.66
IRF3-219ENST00000597636 DSCR9P59020 149 aa10.95□□□□□ -0.66
IRF3-219ENST00000597636 LINC01561Q8N1V8 128 aa10.95□□□□□ -0.66
IRF3-219ENST00000597636 DYNLRB2Q8TF09 96 aa10.95□□□□□ -0.66
IRF3-219ENST00000597636 UPK3BQ9BT76 320 aa10.95□□□□□ -0.66
IRF3-219ENST00000597636 NCR3O14931 201 aa10.95□□□□□ -0.66
IRF3-219ENST00000597636 TMEM258P61165 79 aa10.95□□□□□ -0.66
IRF3-219ENST00000597636 KRTAP1-3Q8IUG1 177 aa10.95□□□□□ -0.66
IRF3-219ENST00000597636 DEFB114Q30KQ6 69 aa10.94□□□□□ -0.66
IRF3-219ENST00000597636 WNK1Q9H4A3 2382 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms