RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 SCGB1C2P0DMR2 95 aa7.56□□□□□ -1.2
ZNF540-208ENST00000589857 HERV-K104P63124 156 aa7.56□□□□□ -1.2
ZNF540-208ENST00000589857 OXLD1Q5BKU9 147 aa7.56□□□□□ -1.2
ZNF540-208ENST00000589857 DEFB121Q5J5C9 76 aa7.56□□□□□ -1.2
ZNF540-208ENST00000589857 CEMP1Q6PRD7 247 aaPredicted RBP7.56□□□□□ -1.2
ZNF540-208ENST00000589857 SBSPONQ8IVN8 264 aa7.56□□□□□ -1.2
ZNF540-208ENST00000589857 FAM104AQ969W3 186 aa7.56□□□□□ -1.2
ZNF540-208ENST00000589857 H3BMG7 143 aa7.55□□□□□ -1.2
ZNF540-208ENST00000589857 SPINK8P0C7L1 97 aa7.55□□□□□ -1.2
ZNF540-208ENST00000589857 PSMB2P49721 201 aa7.55□□□□□ -1.2
ZNF540-208ENST00000589857 SFTA2Q6UW10 78 aa7.55□□□□□ -1.2
ZNF540-208ENST00000589857 MUSTN1Q8IVN3 82 aa7.55□□□□□ -1.2
ZNF540-208ENST00000589857 PPDPFQ9H3Y8 114 aa7.55□□□□□ -1.2
ZNF540-208ENST00000589857 IGLV5-39A0A0G2JS06 123 aa7.54□□□□□ -1.2
ZNF540-208ENST00000589857 PLAC8L1A1L4L8 177 aa7.54□□□□□ -1.2
ZNF540-208ENST00000589857 COX6CP09669 75 aa7.54□□□□□ -1.2
ZNF540-208ENST00000589857 APOC4P55056 127 aa7.54□□□□□ -1.2
ZNF540-208ENST00000589857 Q1RN00 199 aa7.54□□□□□ -1.2
ZNF540-208ENST00000589857 RNASE13Q5GAN3 156 aaKnown RBP7.54□□□□□ -1.2
ZNF540-208ENST00000589857 CDC42SE2Q9NRR3 84 aa7.54□□□□□ -1.2
ZNF540-208ENST00000589857 CDKN2A-AS1Q9UH64 79 aa7.54□□□□□ -1.2
ZNF540-208ENST00000589857 NBEAL2Q6ZNJ1 2754 aa7.54□□□□□ -1.2
ZNF540-208ENST00000589857 CMYA5Q8N3K9 4069 aa7.53□□□□□ -1.2
ZNF540-208ENST00000589857 TRAV8-3A0A0A6YYJ7 113 aa7.53□□□□□ -1.2
ZNF540-208ENST00000589857 LYRM9A8MSI8 78 aa7.53□□□□□ -1.2
ZNF540-208ENST00000589857 M0QXV9 152 aa7.53□□□□□ -1.2
ZNF540-208ENST00000589857 PRSS2P07478 247 aa7.53□□□□□ -1.2
ZNF540-208ENST00000589857 IGHV3-33P01772 117 aa7.52□□□□□ -1.21
ZNF540-208ENST00000589857 ATXN8Q156A1 80 aa7.52□□□□□ -1.21
ZNF540-208ENST00000589857 LINC00242Q5T6M2 205 aa7.52□□□□□ -1.21
ZNF540-208ENST00000589857 LINC00612Q8N6U2 182 aa7.52□□□□□ -1.21
ZNF540-208ENST00000589857 LITAFQ99732 161 aa7.52□□□□□ -1.21
ZNF540-208ENST00000589857 WFDC10AQ9H1F0 79 aa7.52□□□□□ -1.21
ZNF540-208ENST00000589857 Q9UF83 564 aa7.52□□□□□ -1.21
ZNF540-208ENST00000589857 TRBV6-8A0A0A6YYG3 113 aa7.51□□□□□ -1.21
ZNF540-208ENST00000589857 TRAV13-1A0A0B4J241 112 aa7.51□□□□□ -1.21
ZNF540-208ENST00000589857 TRBV30A0A0K0K1B3 111 aa7.51□□□□□ -1.21
ZNF540-208ENST00000589857 NHLRC4P0CG21 123 aaPredicted RBP7.51□□□□□ -1.21
ZNF540-208ENST00000589857 LINC00694P0DN24 101 aa7.51□□□□□ -1.21
ZNF540-208ENST00000589857 FHL2Q14192 279 aa7.51□□□□□ -1.21
ZNF540-208ENST00000589857 NTM-AS1Q6ZSK4 140 aa7.51□□□□□ -1.21
ZNF540-208ENST00000589857 WFDC9Q8NEX5 89 aa7.51□□□□□ -1.21
ZNF540-208ENST00000589857 PRO0461Q9UI25 63 aa7.51□□□□□ -1.21
ZNF540-208ENST00000589857 TEX48A0A1B0GUV7 120 aa7.5□□□□□ -1.21
ZNF540-208ENST00000589857 WFDC2Q14508 124 aa7.5□□□□□ -1.21
ZNF540-208ENST00000589857 B9D2Q9BPU9 175 aa7.5□□□□□ -1.21
ZNF540-208ENST00000589857 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
ZNF540-208ENST00000589857 PCP4P48539 62 aa7.49□□□□□ -1.21
ZNF540-208ENST00000589857 CHCHD5Q9BSY4 110 aa7.49□□□□□ -1.21
ZNF540-208ENST00000589857 Q9H8V8 135 aa7.49□□□□□ -1.21
ZNF540-208ENST00000589857 PRO0255Q9UI72 69 aa7.49□□□□□ -1.21
ZNF540-208ENST00000589857 C3orf84H3BNL1 204 aa7.48□□□□□ -1.21
ZNF540-208ENST00000589857 TCL1BO95988 128 aa7.48□□□□□ -1.21
ZNF540-208ENST00000589857 ETDBQ3ZM63 59 aa7.48□□□□□ -1.21
ZNF540-208ENST00000589857 MEIG1Q5JSS6 88 aa7.48□□□□□ -1.21
ZNF540-208ENST00000589857 PPDPFLQ8WWR9 84 aa7.48□□□□□ -1.21
ZNF540-208ENST00000589857 KMT2CQ8NEZ4 4911 aaKnown RBP7.47□□□□□ -1.21
ZNF540-208ENST00000589857 K7EIL1 84 aa7.47□□□□□ -1.21
ZNF540-208ENST00000589857 DEFB130BP0DP73 79 aa7.47□□□□□ -1.21
ZNF540-208ENST00000589857 DEFB130AP0DP74 79 aa7.47□□□□□ -1.21
ZNF540-208ENST00000589857 SH2D6Q7Z4S9 175 aa7.47□□□□□ -1.21
ZNF540-208ENST00000589857 TEN1Q86WV5 123 aa7.47□□□□□ -1.21
ZNF540-208ENST00000589857 LINC01561Q8N1V8 128 aa7.47□□□□□ -1.21
ZNF540-208ENST00000589857 ICOSQ9Y6W8 199 aa7.47□□□□□ -1.21
ZNF540-208ENST00000589857 A0A1B0GUV1 79 aa7.46□□□□□ -1.22
ZNF540-208ENST00000589857 F5H768 121 aa7.46□□□□□ -1.22
ZNF540-208ENST00000589857 MIFP14174 115 aa7.46□□□□□ -1.22
ZNF540-208ENST00000589857 GYPEP15421 78 aa7.46□□□□□ -1.22
ZNF540-208ENST00000589857 COX6A2Q02221 97 aa7.46□□□□□ -1.22
ZNF540-208ENST00000589857 GAGE6Q13070 117 aa7.46□□□□□ -1.22
ZNF540-208ENST00000589857 COX7B2Q8TF08 81 aa7.46□□□□□ -1.22
ZNF540-208ENST00000589857 ZNF625Q96I27 306 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-208ENST00000589857 AGRNO00468 2067 aa7.46□□□□□ -1.22
ZNF540-208ENST00000589857 NOTCH3Q9UM47 2321 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 TRAV26-1A0A087WT03 109 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 H7C2G1 150 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 SLC25A20O43772 301 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 SCGB1A1P11684 91 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 FOXI1Q12951 378 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 SS18Q15532 418 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 ADAMTSL4-AS1Q5T5F5 129 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 LINC00308Q8TCZ7 52 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 LINC01600Q96MT4 127 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 X6R8D5 127 aa7.45□□□□□ -1.22
ZNF540-208ENST00000589857 LOC100131303A0A0U1RQF7 123 aa7.44□□□□□ -1.22
ZNF540-208ENST00000589857 TMEM262E9PQX1 116 aa7.44□□□□□ -1.22
ZNF540-208ENST00000589857 PAX4O43316 350 aa7.44□□□□□ -1.22
ZNF540-208ENST00000589857 RPL13AP40429 203 aaKnown RBP7.44□□□□□ -1.22
ZNF540-208ENST00000589857 EGFEM1PQ0D2K5 195 aa7.44□□□□□ -1.22
ZNF540-208ENST00000589857 LINC01620Q4KN68 170 aa7.44□□□□□ -1.22
ZNF540-208ENST00000589857 FAM222AQ5U5X8 452 aa7.44□□□□□ -1.22
ZNF540-208ENST00000589857 SIGMAR1Q99720 223 aa7.44□□□□□ -1.22
ZNF540-208ENST00000589857 TENM3Q9P273 2699 aa7.43□□□□□ -1.22
ZNF540-208ENST00000589857 A0A087WZ39 114 aa7.43□□□□□ -1.22
ZNF540-208ENST00000589857 TRAV13-2A0A0B4J235 113 aa7.43□□□□□ -1.22
ZNF540-208ENST00000589857 TRBV10-2A0A0K0K1G8 114 aa7.43□□□□□ -1.22
ZNF540-208ENST00000589857 C9JAW5 83 aa7.43□□□□□ -1.22
ZNF540-208ENST00000589857 H3BT86 120 aa7.43□□□□□ -1.22
ZNF540-208ENST00000589857 LCE2BO14633 110 aa7.43□□□□□ -1.22
ZNF540-208ENST00000589857 DAD1P61803 113 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms