RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 COX6A2Q02221 97 aa8.27□□□□□ -1.09
CCBE1-203ENST00000589116 SNHG12Q9BXW3 62 aa8.27□□□□□ -1.09
CCBE1-203ENST00000589116 HUWE1Q7Z6Z7 4374 aaKnown RBP8.26□□□□□ -1.09
CCBE1-203ENST00000589116 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
CCBE1-203ENST00000589116 IGHV3-30-3P0DP02 117 aa8.26□□□□□ -1.09
CCBE1-203ENST00000589116 TSPEAR-AS2P59090 65 aa8.26□□□□□ -1.09
CCBE1-203ENST00000589116 SS18Q15532 418 aa8.26□□□□□ -1.09
CCBE1-203ENST00000589116 IGKV3OR2-268A0A0C4DH90 116 aa8.25□□□□□ -1.09
CCBE1-203ENST00000589116 EREGO14944 169 aa8.25□□□□□ -1.09
CCBE1-203ENST00000589116 ANGP03950 147 aaKnown RBP8.25□□□□□ -1.09
CCBE1-203ENST00000589116 SPINK8P0C7L1 97 aa8.25□□□□□ -1.09
CCBE1-203ENST00000589116 HSD52Q0P140 79 aa8.25□□□□□ -1.09
CCBE1-203ENST00000589116 IGHV3-64A0A075B6Q5 118 aa8.24□□□□□ -1.09
CCBE1-203ENST00000589116 TRAV8-3A0A0A6YYJ7 113 aa8.24□□□□□ -1.09
CCBE1-203ENST00000589116 IGLV5-39A0A0G2JS06 123 aa8.24□□□□□ -1.09
CCBE1-203ENST00000589116 C3orf84H3BNL1 204 aa8.24□□□□□ -1.09
CCBE1-203ENST00000589116 RYR2Q92736 4967 aa8.24□□□□□ -1.09
CCBE1-203ENST00000589116 SMIM1B2RUZ4 78 aa8.24□□□□□ -1.09
CCBE1-203ENST00000589116 REG3AQ06141 175 aa8.24□□□□□ -1.09
CCBE1-203ENST00000589116 ESRGQ1W209 222 aa8.24□□□□□ -1.09
CCBE1-203ENST00000589116 LINC00269Q8N2A0 174 aa8.24□□□□□ -1.09
CCBE1-203ENST00000589116 IGHV3OR16-9A0A0B4J2B5 98 aa8.23□□□□□ -1.09
CCBE1-203ENST00000589116 HINT1P49773 126 aaPredicted RBP8.23□□□□□ -1.09
CCBE1-203ENST00000589116 TAL2Q16559 108 aa8.23□□□□□ -1.09
CCBE1-203ENST00000589116 ZFAND6Q6FIF0 208 aa8.23□□□□□ -1.09
CCBE1-203ENST00000589116 SCGB1D4Q6XE38 83 aa8.23□□□□□ -1.09
CCBE1-203ENST00000589116 A0A087WZ39 114 aa8.22□□□□□ -1.09
CCBE1-203ENST00000589116 BVES-AS1Q5T3Y7 98 aa8.22□□□□□ -1.09
CCBE1-203ENST00000589116 WFDC10BQ8IUB3 73 aa8.22□□□□□ -1.09
CCBE1-203ENST00000589116 Q8N3U1 123 aa8.22□□□□□ -1.09
CCBE1-203ENST00000589116 PRR34Q9NV39 138 aa8.22□□□□□ -1.09
CCBE1-203ENST00000589116 BATFQ16520 125 aa8.21□□□□□ -1.09
CCBE1-203ENST00000589116 CLPSL2Q6UWE3 100 aa8.21□□□□□ -1.09
CCBE1-203ENST00000589116 LINC01561Q8N1V8 128 aa8.21□□□□□ -1.09
CCBE1-203ENST00000589116 TENM2Q9NT68 2774 aa8.21□□□□□ -1.1
CCBE1-203ENST00000589116 NDUFA12Q9UI09 145 aa8.21□□□□□ -1.1
CCBE1-203ENST00000589116 DNAH9Q9NYC9 4486 aa8.2□□□□□ -1.1
CCBE1-203ENST00000589116 IGLL5B9A064 214 aa8.2□□□□□ -1.1
CCBE1-203ENST00000589116 XCL1P47992 114 aa8.2□□□□□ -1.1
CCBE1-203ENST00000589116 LINC01556Q5JQF7 62 aa8.2□□□□□ -1.1
CCBE1-203ENST00000589116 COL5A1-AS1Q5SY13 56 aa8.2□□□□□ -1.1
CCBE1-203ENST00000589116 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
CCBE1-203ENST00000589116 SPANXB1Q9NS25 103 aaPredicted RBP8.2□□□□□ -1.1
CCBE1-203ENST00000589116 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
CCBE1-203ENST00000589116 NDUFA1O15239 70 aa8.19□□□□□ -1.1
CCBE1-203ENST00000589116 IGHV3-30P01768 117 aa8.19□□□□□ -1.1
CCBE1-203ENST00000589116 IGHV3-33P01772 117 aa8.19□□□□□ -1.1
CCBE1-203ENST00000589116 CRPP02741 224 aa8.19□□□□□ -1.1
CCBE1-203ENST00000589116 IGHV3-30-5P0DP03 117 aa8.19□□□□□ -1.1
CCBE1-203ENST00000589116 CCL18P55774 89 aa8.19□□□□□ -1.1
CCBE1-203ENST00000589116 CHCHD10Q8WYQ3 142 aaPredicted RBP8.19□□□□□ -1.1
CCBE1-203ENST00000589116 TRAV8-4A0A0B4J246 113 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 C10orf126Q8N4M7 172 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 ORAOV1Q8WV07 137 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 HIST1H4GQ99525 98 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 TM2D2Q9BX73 214 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 A0A0J9YXY3 114 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 LCE6AA0A183 80 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 TMEM238C9JI98 176 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 DNAH10OSP0CZ25 163 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 C5orf38Q86SI9 138 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 CEND1Q8N111 149 aa8.18□□□□□ -1.1
CCBE1-203ENST00000589116 DYNC2H1Q8NCM8 4307 aaKnown RBP8.17□□□□□ -1.1
CCBE1-203ENST00000589116 COX7A2LO14548 114 aa8.17□□□□□ -1.1
CCBE1-203ENST00000589116 GCSHP23434 173 aa8.17□□□□□ -1.1
CCBE1-203ENST00000589116 MIAQ16674 131 aa8.17□□□□□ -1.1
CCBE1-203ENST00000589116 CASC10Q5T4H9 136 aa8.17□□□□□ -1.1
CCBE1-203ENST00000589116 ENHOQ6UWT2 76 aa8.17□□□□□ -1.1
CCBE1-203ENST00000589116 COX7B2Q8TF08 81 aa8.17□□□□□ -1.1
CCBE1-203ENST00000589116 UPK3BQ9BT76 320 aa8.17□□□□□ -1.1
CCBE1-203ENST00000589116 LINC00588Q9Y4M8 146 aa8.17□□□□□ -1.1
CCBE1-203ENST00000589116 A6NDN8 102 aa8.16□□□□□ -1.1
CCBE1-203ENST00000589116 TIMM17BO60830 172 aa8.16□□□□□ -1.1
CCBE1-203ENST00000589116 HERV-K104P63124 156 aa8.16□□□□□ -1.1
CCBE1-203ENST00000589116 SRSF9Q13242 221 aaKnown RBP eCLIP8.16□□□□□ -1.1
CCBE1-203ENST00000589116 SFTA2Q6UW10 78 aa8.16□□□□□ -1.1
CCBE1-203ENST00000589116 UBE2WQ96B02 151 aa8.16□□□□□ -1.1
CCBE1-203ENST00000589116 ZNF625Q96I27 306 aaPredicted RBP8.16□□□□□ -1.1
CCBE1-203ENST00000589116 STAB2Q8WWQ8 2551 aa8.16□□□□□ -1.1
CCBE1-203ENST00000589116 IGLV10-54A0A075B6I4 117 aa8.15□□□□□ -1.1
CCBE1-203ENST00000589116 NUPR2A6NF83 97 aa8.15□□□□□ -1.1
CCBE1-203ENST00000589116 FOXI1Q12951 378 aa8.15□□□□□ -1.1
CCBE1-203ENST00000589116 Q9H8V8 135 aa8.15□□□□□ -1.1
CCBE1-203ENST00000589116 Q6ZVH6 145 aa8.14□□□□□ -1.11
CCBE1-203ENST00000589116 Q8IZM0 81 aa8.14□□□□□ -1.11
CCBE1-203ENST00000589116 MUC7Q8TAX7 377 aa8.14□□□□□ -1.11
CCBE1-203ENST00000589116 GAGE12HA6NDE8 117 aa8.14□□□□□ -1.11
CCBE1-203ENST00000589116 FXYD2P54710 66 aa8.14□□□□□ -1.11
CCBE1-203ENST00000589116 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
CCBE1-203ENST00000589116 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
CCBE1-203ENST00000589116 A6NJY4 79 aa8.13□□□□□ -1.11
CCBE1-203ENST00000589116 APOMO95445 188 aa8.13□□□□□ -1.11
CCBE1-203ENST00000589116 MALP21145 153 aa8.13□□□□□ -1.11
CCBE1-203ENST00000589116 PTTG1IPP53801 180 aa8.13□□□□□ -1.11
CCBE1-203ENST00000589116 CIRBPQ14011 172 aaKnown RBP8.13□□□□□ -1.11
CCBE1-203ENST00000589116 LITAFQ99732 161 aa8.13□□□□□ -1.11
CCBE1-203ENST00000589116 SPANXDQ9BXN6 97 aa8.13□□□□□ -1.11
CCBE1-203ENST00000589116 SPANXCQ9NY87 97 aa8.13□□□□□ -1.11
CCBE1-203ENST00000589116 APLNQ9ULZ1 77 aa8.13□□□□□ -1.11
CCBE1-203ENST00000589116 KLK5Q9Y337 293 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms